Experiment: MoYLS4 media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2774 and DVU2775 are separated by 446 nucleotides DVU2775 and dsrC are separated by 354 nucleotides dsrC and DVU2777 are separated by 196 nucleotides
DVU2774: DVU2774 - CBS domain protein/ACT domain protein (TIGR), at 2,881,702 to 2,882,385
DVU2774
DVU2775: DVU2775 - hypothetical protein (TIGR), at 2,882,832 to 2,883,107
DVU2775
DVU2776: dsrC - dissimilatory sulfite reductase, gamma subunit (TIGR), at 2,883,462 to 2,883,779
dsrC
DVU2777: DVU2777 - hypothetical protein (TIGR), at 2,883,976 to 2,884,242
DVU2777
Position (kb)
2882
2883
2884 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2881.832 kb on - strand, within DVU2774 at 2882.050 kb on + strand, within DVU2774 at 2882.174 kb on - strand, within DVU2774 at 2882.225 kb on + strand, within DVU2774 at 2882.252 kb on + strand, within DVU2774 at 2882.340 kb on + strand at 2882.343 kb on - strand at 2882.345 kb on - strand at 2882.396 kb on + strand at 2882.444 kb on + strand at 2882.444 kb on + strand at 2882.444 kb on + strand at 2882.452 kb on - strand at 2882.521 kb on + strand at 2882.547 kb on + strand at 2882.557 kb on + strand at 2882.578 kb on + strand at 2882.663 kb on + strand at 2882.676 kb on + strand at 2882.684 kb on - strand at 2883.132 kb on - strand at 2883.156 kb on - strand at 2883.169 kb on - strand at 2883.256 kb on - strand at 2883.354 kb on - strand at 2883.354 kb on - strand at 2883.906 kb on - strand at 2884.054 kb on + strand, within DVU2777 at 2884.064 kb on + strand, within DVU2777 at 2884.064 kb on + strand, within DVU2777 at 2884.064 kb on + strand, within DVU2777 at 2884.064 kb on + strand, within DVU2777 at 2884.069 kb on + strand, within DVU2777 at 2884.072 kb on - strand, within DVU2777 at 2884.072 kb on - strand, within DVU2777 at 2884.072 kb on - strand, within DVU2777 at 2884.094 kb on + strand, within DVU2777 at 2884.101 kb on + strand, within DVU2777
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 media remove 2,881,832 - DVU2774 0.19 +2.0 2,882,050 + DVU2774 0.51 +0.6 2,882,174 - DVU2774 0.69 +1.2 2,882,225 + DVU2774 0.76 +1.3 2,882,252 + DVU2774 0.80 +0.6 2,882,340 + +2.0 2,882,343 - +2.0 2,882,345 - +1.0 2,882,396 + -1.2 2,882,444 + -1.8 2,882,444 + -0.3 2,882,444 + +0.0 2,882,452 - -1.7 2,882,521 + -0.7 2,882,547 + +2.0 2,882,557 + -1.1 2,882,578 + +2.0 2,882,663 + -0.4 2,882,676 + -0.6 2,882,684 - -0.3 2,883,132 - +2.0 2,883,156 - -0.4 2,883,169 - +0.4 2,883,256 - +2.0 2,883,354 - +0.0 2,883,354 - +0.0 2,883,906 - -1.2 2,884,054 + DVU2777 0.29 -0.1 2,884,064 + DVU2777 0.33 -0.6 2,884,064 + DVU2777 0.33 +0.7 2,884,064 + DVU2777 0.33 -0.1 2,884,064 + DVU2777 0.33 -0.3 2,884,069 + DVU2777 0.35 -1.1 2,884,072 - DVU2777 0.36 -1.3 2,884,072 - DVU2777 0.36 -1.3 2,884,072 - DVU2777 0.36 -0.3 2,884,094 + DVU2777 0.44 +0.6 2,884,101 + DVU2777 0.47 +1.0
Or see this region's nucleotide sequence