Strain Fitness in Ralstonia solanacearum IBSBF1503 around RALBFv3_RS20100

Experiment: CPG with phosphorous 0.063 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	CPG with phosphorous 0.063 vol%
1,204,209	-				-0.1
1,204,368	+				+0.2
1,204,369	-				-0.1
1,204,369	-				-0.1
1,204,452	+				-0.1
1,204,452	+				-0.2
1,204,562	-				-0.4
1,204,582	-				-0.1
1,204,778	+				-0.1
1,204,837	-				+1.9
1,204,837	-				-0.1
1,205,353	+		RALBFv3_RS20100	0.35	+2.2
1,205,353	+		RALBFv3_RS20100	0.35	-0.1
1,205,353	+		RALBFv3_RS20100	0.35	-0.1
1,205,354	-		RALBFv3_RS20100	0.35	-0.1
1,205,354	-		RALBFv3_RS20100	0.35	-1.1
1,205,435	-		RALBFv3_RS20100	0.41	-0.1
1,205,650	+		RALBFv3_RS20100	0.59	-0.1
1,205,650	+		RALBFv3_RS20100	0.59	-0.1
1,205,650	+		RALBFv3_RS20100	0.59	-0.7
1,205,651	-		RALBFv3_RS20100	0.59	-0.1
1,205,651	-		RALBFv3_RS20100	0.59	-0.1
1,205,668	+		RALBFv3_RS20100	0.60	-0.1
1,205,836	+		RALBFv3_RS20100	0.74	-0.1
1,205,836	+		RALBFv3_RS20100	0.74	-0.3
1,205,837	-		RALBFv3_RS20100	0.74	-0.3
1,205,837	-		RALBFv3_RS20100	0.74	-0.2
1,206,004	+		RALBFv3_RS20100	0.88	+1.4
1,206,053	-				-0.3
1,206,070	+				-0.1
1,206,070	+				-0.1
1,206,071	-				+1.1
1,206,233	+		RALBFv3_RS20105	0.14	-0.8
1,206,234	-		RALBFv3_RS20105	0.14	-1.7
1,206,312	-		RALBFv3_RS20105	0.29	-0.5
1,206,312	-		RALBFv3_RS20105	0.29	-0.1
1,206,312	-		RALBFv3_RS20105	0.29	-1.1
1,206,315	-		RALBFv3_RS20105	0.30	-0.1
1,206,476	+		RALBFv3_RS20105	0.61	-1.1
1,206,736	+		RALBFv3_RS20110	0.23	-0.1
1,206,737	-		RALBFv3_RS20110	0.23	-0.1
1,206,757	+		RALBFv3_RS20110	0.33	-0.0
1,206,757	+		RALBFv3_RS20110	0.33	-0.1
1,206,758	-		RALBFv3_RS20110	0.34	-2.7
1,206,758	-		RALBFv3_RS20110	0.34	-0.1
1,206,766	+		RALBFv3_RS20110	0.38	-0.1
1,206,766	+		RALBFv3_RS20110	0.38	+0.9
1,206,766	+		RALBFv3_RS20110	0.38	-2.1
1,206,766	+		RALBFv3_RS20110	0.38	-1.1
1,206,767	-		RALBFv3_RS20110	0.38	-0.1
1,206,767	-		RALBFv3_RS20110	0.38	+2.8
1,206,767	-		RALBFv3_RS20110	0.38	-0.1
1,206,767	-		RALBFv3_RS20110	0.38	-0.1
1,206,767	-		RALBFv3_RS20110	0.38	-0.8
1,206,868	-		RALBFv3_RS20110	0.89	-0.1
1,206,868	-		RALBFv3_RS20110	0.89	-2.3