Experiment: Hydrogen/Acetate-Sulfite (90%atm/5mM-20mM) with 0.1% Yeast Extract
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1851 and DVU1852 are separated by 154 nucleotides DVU1852 and DVU1853 are separated by 181 nucleotides DVU1853 and DVU1854 are separated by 76 nucleotides
DVU1851: DVU1851 - peptidase, M23/M37 family (TIGR), at 1,918,806 to 1,920,128
DVU1851
DVU1852: DVU1852 - conserved hypothetical protein (TIGR), at 1,920,283 to 1,920,894
DVU1852
DVU1853: DVU1853 - hypothetical protein (TIGR), at 1,921,076 to 1,921,372
DVU1853
DVU1854: DVU1854 - hypothetical protein (TIGR), at 1,921,449 to 1,922,141
DVU1854
Position (kb)
1920
1921 Strain fitness (log2 ratio)
-2
-1
0
1 at 1919.403 kb on + strand, within DVU1851 at 1919.423 kb on + strand, within DVU1851 at 1919.462 kb on - strand, within DVU1851 at 1919.593 kb on + strand, within DVU1851 at 1919.639 kb on + strand, within DVU1851 at 1919.729 kb on - strand, within DVU1851 at 1919.752 kb on - strand, within DVU1851 at 1919.752 kb on - strand, within DVU1851 at 1919.910 kb on - strand, within DVU1851 at 1919.940 kb on - strand, within DVU1851 at 1920.043 kb on - strand at 1920.635 kb on - strand, within DVU1852 at 1920.636 kb on - strand, within DVU1852 at 1920.637 kb on + strand, within DVU1852 at 1920.647 kb on - strand, within DVU1852 at 1920.652 kb on - strand, within DVU1852 at 1920.855 kb on + strand at 1920.863 kb on - strand at 1920.934 kb on - strand at 1920.982 kb on + strand at 1921.179 kb on - strand, within DVU1853 at 1921.247 kb on + strand, within DVU1853 at 1921.368 kb on - strand at 1921.576 kb on + strand, within DVU1854 at 1921.639 kb on - strand, within DVU1854 at 1921.707 kb on - strand, within DVU1854 at 1921.825 kb on - strand, within DVU1854 at 1921.831 kb on + strand, within DVU1854
Per-strain Table
Position Strand Gene LocusTag Fraction Hydrogen/Acetate-Sulfite (90%atm/5mM-20mM) with 0.1% Yeast Extract remove 1,919,403 + DVU1851 0.45 -0.4 1,919,423 + DVU1851 0.47 -0.0 1,919,462 - DVU1851 0.50 -0.4 1,919,593 + DVU1851 0.59 -1.0 1,919,639 + DVU1851 0.63 +0.0 1,919,729 - DVU1851 0.70 -1.6 1,919,752 - DVU1851 0.72 -0.6 1,919,752 - DVU1851 0.72 +0.9 1,919,910 - DVU1851 0.83 +0.8 1,919,940 - DVU1851 0.86 +0.3 1,920,043 - +0.5 1,920,635 - DVU1852 0.58 -1.5 1,920,636 - DVU1852 0.58 -1.7 1,920,637 + DVU1852 0.58 -0.1 1,920,647 - DVU1852 0.59 -0.9 1,920,652 - DVU1852 0.60 +1.5 1,920,855 + -0.3 1,920,863 - -1.7 1,920,934 - -0.5 1,920,982 + -0.4 1,921,179 - DVU1853 0.35 -0.0 1,921,247 + DVU1853 0.58 +0.9 1,921,368 - -0.3 1,921,576 + DVU1854 0.18 -2.0 1,921,639 - DVU1854 0.27 -0.8 1,921,707 - DVU1854 0.37 -0.4 1,921,825 - DVU1854 0.54 -1.1 1,921,831 + DVU1854 0.55 +0.0
Or see this region's nucleotide sequence