Experiment: Hydrogen/Acetate-Sulfite (90%atm/5mM-20mM)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0582 and DVU0583 overlap by 4 nucleotides DVU0583 and DVU0584 are separated by 131 nucleotides
DVU0582: DVU0582 - sensory box histidine kinase (TIGR), at 645,923 to 647,941
DVU0582
DVU0583: DVU0583 - lipoprotein, putative (TIGR), at 647,938 to 649,209
DVU0583
DVU0584: DVU0584 - transposase, putative (TIGR), at 649,341 to 650,213
DVU0584
Position (kb) 647
648
649
650 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 646.970 kb on - strand, within DVU0582 at 647.009 kb on + strand, within DVU0582 at 647.009 kb on + strand, within DVU0582 at 647.017 kb on - strand, within DVU0582 at 647.164 kb on + strand, within DVU0582 at 647.210 kb on + strand, within DVU0582 at 647.286 kb on + strand, within DVU0582 at 647.301 kb on + strand, within DVU0582 at 647.321 kb on - strand, within DVU0582 at 647.335 kb on + strand, within DVU0582 at 647.338 kb on - strand, within DVU0582 at 647.397 kb on + strand, within DVU0582 at 647.484 kb on + strand, within DVU0582 at 647.497 kb on - strand, within DVU0582 at 647.497 kb on - strand, within DVU0582 at 647.551 kb on + strand, within DVU0582 at 647.600 kb on - strand, within DVU0582 at 647.614 kb on - strand, within DVU0582 at 647.624 kb on + strand, within DVU0582 at 647.630 kb on + strand, within DVU0582 at 647.649 kb on + strand, within DVU0582 at 647.798 kb on + strand at 647.886 kb on - strand at 648.046 kb on + strand at 648.051 kb on + strand at 648.084 kb on - strand, within DVU0583 at 648.084 kb on - strand, within DVU0583 at 648.084 kb on - strand, within DVU0583 at 648.084 kb on - strand, within DVU0583 at 648.204 kb on - strand, within DVU0583 at 648.204 kb on - strand, within DVU0583 at 648.259 kb on + strand, within DVU0583 at 648.354 kb on - strand, within DVU0583 at 648.453 kb on + strand, within DVU0583 at 648.453 kb on + strand, within DVU0583 at 648.461 kb on - strand, within DVU0583 at 648.523 kb on - strand, within DVU0583 at 648.588 kb on + strand, within DVU0583 at 648.850 kb on + strand, within DVU0583 at 648.858 kb on + strand, within DVU0583 at 648.859 kb on - strand, within DVU0583 at 648.907 kb on + strand, within DVU0583 at 648.946 kb on + strand, within DVU0583 at 648.974 kb on + strand, within DVU0583 at 649.078 kb on + strand, within DVU0583 at 649.098 kb on + strand at 649.101 kb on - strand at 649.113 kb on + strand at 649.169 kb on + strand at 649.177 kb on - strand at 649.192 kb on - strand at 649.204 kb on + strand at 649.204 kb on + strand at 649.212 kb on - strand at 649.247 kb on + strand at 649.247 kb on + strand at 649.247 kb on + strand at 649.269 kb on + strand at 649.367 kb on - strand at 649.499 kb on + strand, within DVU0584 at 649.509 kb on + strand, within DVU0584 at 649.539 kb on - strand, within DVU0584 at 649.629 kb on - strand, within DVU0584 at 649.713 kb on + strand, within DVU0584 at 649.725 kb on + strand, within DVU0584 at 649.733 kb on - strand, within DVU0584 at 649.738 kb on + strand, within DVU0584 at 649.746 kb on - strand, within DVU0584 at 649.786 kb on + strand, within DVU0584 at 649.799 kb on - strand, within DVU0584 at 649.829 kb on - strand, within DVU0584 at 649.893 kb on - strand, within DVU0584 at 649.935 kb on - strand, within DVU0584 at 649.951 kb on + strand, within DVU0584 at 649.951 kb on - strand, within DVU0584 at 649.993 kb on + strand, within DVU0584 at 650.069 kb on + strand, within DVU0584 at 650.077 kb on - strand, within DVU0584
Per-strain Table
Position Strand Gene LocusTag Fraction Hydrogen/Acetate-Sulfite (90%atm/5mM-20mM) remove 646,970 - DVU0582 0.52 +0.5 647,009 + DVU0582 0.54 +0.2 647,009 + DVU0582 0.54 +1.8 647,017 - DVU0582 0.54 +1.1 647,164 + DVU0582 0.61 +0.5 647,210 + DVU0582 0.64 +0.8 647,286 + DVU0582 0.68 +0.6 647,301 + DVU0582 0.68 +1.6 647,321 - DVU0582 0.69 +3.3 647,335 + DVU0582 0.70 +1.0 647,338 - DVU0582 0.70 +1.5 647,397 + DVU0582 0.73 +0.9 647,484 + DVU0582 0.77 +1.3 647,497 - DVU0582 0.78 +0.3 647,497 - DVU0582 0.78 +1.2 647,551 + DVU0582 0.81 +0.6 647,600 - DVU0582 0.83 +1.0 647,614 - DVU0582 0.84 +0.9 647,624 + DVU0582 0.84 +0.8 647,630 + DVU0582 0.85 +0.7 647,649 + DVU0582 0.85 +1.0 647,798 + +0.7 647,886 - +1.0 648,046 + +0.8 648,051 + +1.2 648,084 - DVU0583 0.11 +0.5 648,084 - DVU0583 0.11 +0.2 648,084 - DVU0583 0.11 -1.6 648,084 - DVU0583 0.11 +1.4 648,204 - DVU0583 0.21 +0.1 648,204 - DVU0583 0.21 +0.7 648,259 + DVU0583 0.25 +1.0 648,354 - DVU0583 0.33 +1.0 648,453 + DVU0583 0.40 +0.9 648,453 + DVU0583 0.40 +0.7 648,461 - DVU0583 0.41 +1.2 648,523 - DVU0583 0.46 +0.2 648,588 + DVU0583 0.51 +1.3 648,850 + DVU0583 0.72 +0.8 648,858 + DVU0583 0.72 +3.6 648,859 - DVU0583 0.72 +0.9 648,907 + DVU0583 0.76 +1.0 648,946 + DVU0583 0.79 +1.1 648,974 + DVU0583 0.81 +1.0 649,078 + DVU0583 0.90 +0.6 649,098 + -0.8 649,101 - +0.8 649,113 + +1.2 649,169 + +1.1 649,177 - +0.8 649,192 - +0.4 649,204 + +1.2 649,204 + +1.3 649,212 - +1.6 649,247 + +0.3 649,247 + +0.1 649,247 + +2.2 649,269 + +0.0 649,367 - -0.8 649,499 + DVU0584 0.18 -0.5 649,509 + DVU0584 0.19 -1.5 649,539 - DVU0584 0.23 +0.1 649,629 - DVU0584 0.33 -0.3 649,713 + DVU0584 0.43 +0.1 649,725 + DVU0584 0.44 -0.0 649,733 - DVU0584 0.45 +0.1 649,738 + DVU0584 0.45 +0.2 649,746 - DVU0584 0.46 +0.9 649,786 + DVU0584 0.51 -0.1 649,799 - DVU0584 0.52 -0.2 649,829 - DVU0584 0.56 +0.1 649,893 - DVU0584 0.63 -1.4 649,935 - DVU0584 0.68 +0.0 649,951 + DVU0584 0.70 -0.1 649,951 - DVU0584 0.70 -2.3 649,993 + DVU0584 0.75 -0.1 650,069 + DVU0584 0.83 +0.2 650,077 - DVU0584 0.84 -0.8
Or see this region's nucleotide sequence