Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1690
Experiment: Hydrogen/Acetate-Sulfite (90%atm/5mM-20mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Hydrogen/Acetate-Sulfite (90%atm/5mM-20mM) |
---|---|---|---|---|---|
remove | |||||
1,768,057 | - | +2.3 | |||
1,768,085 | - | +0.1 | |||
1,768,127 | - | +2.9 | |||
1,768,151 | - | +1.6 | |||
1,768,279 | + | DVU1690 | 0.18 | +1.1 | |
1,768,344 | - | DVU1690 | 0.29 | +1.4 | |
1,768,410 | + | DVU1690 | 0.41 | +2.1 | |
1,768,744 | + | +0.6 | |||
1,768,763 | + | -0.4 | |||
1,768,870 | + | -1.0 | |||
1,768,878 | - | -0.9 | |||
1,768,943 | - | -0.2 | |||
1,768,951 | - | +0.1 | |||
1,769,006 | + | -0.4 | |||
1,769,351 | - | DVU1692 | 0.77 | -0.1 | |
1,769,392 | - | DVU1692 | 0.88 | +0.1 | |
1,769,458 | - | +0.4 | |||
1,769,487 | + | -0.1 | |||
1,769,487 | + | -0.4 | |||
1,769,495 | - | +0.2 | |||
1,769,618 | + | +0.0 | |||
1,769,626 | - | +0.2 |
Or see this region's nucleotide sequence