Experiment: Hydrogen/Acetate-Sulfite (90%atm/5mM-20mM)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0577 and DVU0578 are separated by 1 nucleotides DVU0578 and DVU0579 overlap by 4 nucleotides DVU0579 and moaA overlap by 4 nucleotides
DVU0577: DVU0577 - formate dehydrogenase formation protein FdhE, putative (TIGR), at 641,591 to 642,472
DVU0577
DVU0578: DVU0578 - formate dehydrogenase accessory protein FdhD, putative (TIGR), at 642,474 to 643,262
DVU0578
DVU0579: DVU0579 - molybdopterin-guanine dinucleotide biosynthesis protein A, putative (TIGR), at 643,259 to 643,927
DVU0579
DVU0580: moaA - molybdenum cofactor biosynthesis protein A (TIGR), at 643,924 to 644,949
moaA
Position (kb) 643
644 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 642.359 kb on + strand, within DVU0577 at 642.359 kb on + strand, within DVU0577 at 642.378 kb on + strand, within DVU0577 at 642.391 kb on - strand at 642.464 kb on + strand at 642.466 kb on - strand at 642.473 kb on + strand at 642.499 kb on + strand at 642.532 kb on + strand at 642.572 kb on - strand, within DVU0578 at 642.609 kb on - strand, within DVU0578 at 642.620 kb on + strand, within DVU0578 at 642.643 kb on + strand, within DVU0578 at 642.748 kb on + strand, within DVU0578 at 642.789 kb on + strand, within DVU0578 at 642.814 kb on - strand, within DVU0578 at 642.833 kb on + strand, within DVU0578 at 642.839 kb on + strand, within DVU0578 at 642.847 kb on - strand, within DVU0578 at 642.848 kb on - strand, within DVU0578 at 642.874 kb on - strand, within DVU0578 at 642.884 kb on + strand, within DVU0578 at 642.931 kb on + strand, within DVU0578 at 642.931 kb on + strand, within DVU0578 at 642.931 kb on + strand, within DVU0578 at 642.931 kb on + strand, within DVU0578 at 642.963 kb on + strand, within DVU0578 at 642.963 kb on + strand, within DVU0578 at 643.076 kb on + strand, within DVU0578 at 643.180 kb on + strand, within DVU0578 at 643.188 kb on + strand at 643.198 kb on - strand at 643.323 kb on + strand at 643.362 kb on - strand, within DVU0579 at 643.419 kb on + strand, within DVU0579 at 643.427 kb on - strand, within DVU0579 at 643.435 kb on - strand, within DVU0579 at 643.488 kb on + strand, within DVU0579 at 643.506 kb on - strand, within DVU0579 at 643.509 kb on + strand, within DVU0579 at 643.517 kb on - strand, within DVU0579 at 643.543 kb on - strand, within DVU0579 at 643.569 kb on - strand, within DVU0579 at 643.598 kb on - strand, within DVU0579 at 643.609 kb on - strand, within DVU0579 at 643.685 kb on + strand, within DVU0579 at 643.816 kb on + strand, within DVU0579 at 643.825 kb on - strand, within DVU0579 at 643.849 kb on + strand, within DVU0579 at 643.856 kb on + strand, within DVU0579 at 643.882 kb on - strand at 643.973 kb on + strand at 643.981 kb on - strand at 644.017 kb on + strand at 644.187 kb on - strand, within moaA at 644.190 kb on + strand, within moaA at 644.309 kb on + strand, within moaA at 644.426 kb on - strand, within moaA at 644.449 kb on - strand, within moaA at 644.669 kb on + strand, within moaA at 644.808 kb on - strand, within moaA at 644.810 kb on + strand, within moaA at 644.810 kb on + strand, within moaA at 644.818 kb on - strand, within moaA at 644.850 kb on - strand at 644.925 kb on + strand at 644.925 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hydrogen/Acetate-Sulfite (90%atm/5mM-20mM) remove 642,359 + DVU0577 0.87 -0.5 642,359 + DVU0577 0.87 +0.1 642,378 + DVU0577 0.89 -0.2 642,391 - -0.2 642,464 + -0.1 642,466 - +1.6 642,473 + -0.1 642,499 + -0.1 642,532 + +0.2 642,572 - DVU0578 0.12 -0.0 642,609 - DVU0578 0.17 -0.3 642,620 + DVU0578 0.19 +0.1 642,643 + DVU0578 0.21 +3.4 642,748 + DVU0578 0.35 +0.5 642,789 + DVU0578 0.40 +0.2 642,814 - DVU0578 0.43 -1.3 642,833 + DVU0578 0.46 -1.1 642,839 + DVU0578 0.46 +0.6 642,847 - DVU0578 0.47 -0.1 642,848 - DVU0578 0.47 -1.2 642,874 - DVU0578 0.51 -1.2 642,884 + DVU0578 0.52 +0.1 642,931 + DVU0578 0.58 -0.0 642,931 + DVU0578 0.58 +0.6 642,931 + DVU0578 0.58 -2.3 642,931 + DVU0578 0.58 -0.3 642,963 + DVU0578 0.62 +0.2 642,963 + DVU0578 0.62 -0.2 643,076 + DVU0578 0.76 +1.9 643,180 + DVU0578 0.89 -0.7 643,188 + +0.9 643,198 - +0.0 643,323 + -0.9 643,362 - DVU0579 0.15 +3.6 643,419 + DVU0579 0.24 -0.8 643,427 - DVU0579 0.25 -1.4 643,435 - DVU0579 0.26 -0.5 643,488 + DVU0579 0.34 +0.4 643,506 - DVU0579 0.37 -0.7 643,509 + DVU0579 0.37 -1.1 643,517 - DVU0579 0.39 -1.5 643,543 - DVU0579 0.42 -1.1 643,569 - DVU0579 0.46 -2.0 643,598 - DVU0579 0.51 -0.4 643,609 - DVU0579 0.52 -0.3 643,685 + DVU0579 0.64 -0.9 643,816 + DVU0579 0.83 -0.6 643,825 - DVU0579 0.85 +1.0 643,849 + DVU0579 0.88 -0.3 643,856 + DVU0579 0.89 -0.8 643,882 - -0.2 643,973 + -1.2 643,981 - -0.9 644,017 + -0.5 644,187 - moaA DVU0580 0.26 -0.7 644,190 + moaA DVU0580 0.26 -0.5 644,309 + moaA DVU0580 0.38 -0.4 644,426 - moaA DVU0580 0.49 -0.3 644,449 - moaA DVU0580 0.51 -0.0 644,669 + moaA DVU0580 0.73 -0.4 644,808 - moaA DVU0580 0.86 -0.5 644,810 + moaA DVU0580 0.86 -0.3 644,810 + moaA DVU0580 0.86 -0.5 644,818 - moaA DVU0580 0.87 -0.8 644,850 - -0.5 644,925 + -0.6 644,925 + -0.3
Or see this region's nucleotide sequence