Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3363

Experiment: Hydrogen/Acetate-Sulfite (90%atm/5mM-20mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydrogen/Acetate-Sulfite (90%atm/5mM-20mM)
3,532,406	+				+0.1
3,532,408	+				+0.3
3,532,450	+				-0.2
3,532,450	+				+1.6
3,532,453	-				-0.3
3,532,458	-				+0.0
3,532,525	+				-0.2
3,532,635	+		DVU3362	0.31	-0.0
3,532,636	+		DVU3362	0.31	-0.3
3,532,641	-		DVU3362	0.32	-0.2
3,532,641	-		DVU3362	0.32	-0.5
3,532,641	-		DVU3362	0.32	+0.3
3,532,643	-		DVU3362	0.33	+0.0
3,532,646	+		DVU3362	0.34	+0.0
3,532,661	-		DVU3362	0.38	+1.3
3,532,679	+		DVU3362	0.42	+0.2
3,532,757	+		DVU3362	0.63	-0.2
3,532,762	+		DVU3362	0.64	-1.0
3,532,765	-		DVU3362	0.65	+0.3
3,532,770	-		DVU3362	0.66	-0.2
3,532,770	-		DVU3362	0.66	-0.1
3,532,770	-		DVU3362	0.66	+0.1
3,532,835	+		DVU3362	0.83	+1.0
3,532,893	-				-0.2
3,532,908	+				-0.1
3,532,913	+				-0.0
3,532,992	+				+0.0
3,532,992	+				+0.0
3,533,001	-				+0.1
3,533,022	+				+0.7
3,533,025	-				+0.6
3,533,025	-				-0.4
3,533,025	-				-0.0
3,533,048	+				-1.0
3,533,051	-				+0.1
3,533,141	+				+0.1
3,533,146	+				-0.0
3,533,154	-	sun	DVU3363	0.10	+0.6
3,533,159	-	sun	DVU3363	0.11	+1.0
3,533,178	+	sun	DVU3363	0.12	-1.6
3,533,178	+	sun	DVU3363	0.12	-0.2
3,533,277	+	sun	DVU3363	0.19	-0.1
3,533,289	+	sun	DVU3363	0.19	+0.3
3,533,314	-	sun	DVU3363	0.21	+0.4
3,533,319	-	sun	DVU3363	0.21	-0.3
3,533,319	-	sun	DVU3363	0.21	+0.4
3,533,326	+	sun	DVU3363	0.22	-1.3
3,533,326	+	sun	DVU3363	0.22	-0.6
3,533,329	-	sun	DVU3363	0.22	+0.3
3,533,331	+	sun	DVU3363	0.22	-0.0
3,533,336	+	sun	DVU3363	0.22	+0.4
3,533,336	+	sun	DVU3363	0.22	+0.5
3,533,344	-	sun	DVU3363	0.23	-0.9
3,533,344	-	sun	DVU3363	0.23	+0.3
3,533,344	-	sun	DVU3363	0.23	-0.1
3,533,344	-	sun	DVU3363	0.23	+0.4
3,533,354	+	sun	DVU3363	0.24	-0.7
3,533,439	-	sun	DVU3363	0.29	+0.1
3,533,468	-	sun	DVU3363	0.31	-0.6
3,533,477	+	sun	DVU3363	0.32	-0.1
3,533,480	-	sun	DVU3363	0.32	+0.7
3,533,484	+	sun	DVU3363	0.32	+0.6
3,533,484	+	sun	DVU3363	0.32	+0.8
3,533,484	+	sun	DVU3363	0.32	+0.1
3,533,558	-	sun	DVU3363	0.37	-0.2
3,533,618	-	sun	DVU3363	0.41	+0.2
3,533,619	-	sun	DVU3363	0.41	-0.1
3,533,692	+	sun	DVU3363	0.46	-0.0
3,533,739	+	sun	DVU3363	0.49	+0.1
3,533,753	-	sun	DVU3363	0.50	-0.0
3,533,770	+	sun	DVU3363	0.51	+0.1
3,533,771	-	sun	DVU3363	0.51	-0.0
3,533,800	+	sun	DVU3363	0.53	+0.8
3,533,800	+	sun	DVU3363	0.53	-0.4
3,533,808	-	sun	DVU3363	0.53	+0.6
3,533,808	-	sun	DVU3363	0.53	+0.2
3,533,865	-	sun	DVU3363	0.57	+0.3
3,533,881	+	sun	DVU3363	0.58	+0.1
3,533,896	+	sun	DVU3363	0.59	+0.1
3,533,972	+	sun	DVU3363	0.64	+0.8
3,533,972	+	sun	DVU3363	0.64	+0.3
3,533,972	+	sun	DVU3363	0.64	+0.0
3,533,972	+	sun	DVU3363	0.64	+1.3
3,533,980	-	sun	DVU3363	0.65	+0.6
3,534,037	+	sun	DVU3363	0.68	+0.6
3,534,057	+	sun	DVU3363	0.70	-0.0
3,534,073	-	sun	DVU3363	0.71	+0.4
3,534,086	-	sun	DVU3363	0.72	-0.1
3,534,101	-	sun	DVU3363	0.73	+0.3
3,534,101	-	sun	DVU3363	0.73	-0.0
3,534,149	+	sun	DVU3363	0.76	-0.6
3,534,151	+	sun	DVU3363	0.76	-0.1
3,534,151	+	sun	DVU3363	0.76	-0.2
3,534,159	-	sun	DVU3363	0.76	-0.0
3,534,159	-	sun	DVU3363	0.76	+0.4
3,534,161	+	sun	DVU3363	0.77	+0.2
3,534,176	+	sun	DVU3363	0.77	+1.2
3,534,181	+	sun	DVU3363	0.78	-0.7
3,534,189	-	sun	DVU3363	0.78	+0.1
3,534,292	+	sun	DVU3363	0.85	+0.2
3,534,346	+	sun	DVU3363	0.89	+2.1
3,534,413	-				-0.4
3,534,433	+				-1.7
3,534,434	-				+0.4
3,534,533	-				-0.2
3,534,552	+				-0.1
3,534,568	-				-0.8
3,534,605	-				+0.6
3,534,621	+				+0.5
3,534,698	+				-0.0
3,534,737	+				-1.7
3,534,835	+				+0.1
3,534,840	+				-0.1
3,534,864	+		DVU3364	0.12	-0.4
3,534,888	-		DVU3364	0.15	-1.3
3,534,952	-		DVU3364	0.22	-0.5
3,534,960	-		DVU3364	0.23	+3.3
3,534,993	-		DVU3364	0.26	-0.6
3,535,059	+		DVU3364	0.33	+0.2
3,535,143	-		DVU3364	0.43	-0.6
3,535,192	-		DVU3364	0.48	+0.4
3,535,192	-		DVU3364	0.48	-0.2
3,535,260	+		DVU3364	0.55	+1.0
3,535,294	-		DVU3364	0.59	+1.0
3,535,322	+		DVU3364	0.62	-1.3
3,535,413	-		DVU3364	0.72	+0.1
3,535,413	-		DVU3364	0.72	-1.0
3,535,451	+		DVU3364	0.76	+0.5
3,535,453	-		DVU3364	0.76	-0.2
3,535,488	-		DVU3364	0.80	+0.2