Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2204

Experiment: Hydrogen/Acetate-Sulfite (90%atm/5mM-20mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydrogen/Acetate-Sulfite (90%atm/5mM-20mM)
2,298,868	+				+0.3
2,298,868	+				+0.1
2,298,868	+				+0.9
2,298,876	-				+0.0
2,298,876	-				+0.0
2,298,876	-				-0.4
2,298,876	-				+0.8
2,298,934	-				+0.1
2,298,990	-				+0.4
2,299,082	+				+0.2
2,299,091	-				-1.0
2,299,099	+				+0.3
2,299,109	+				+0.1
2,299,109	+				-1.4
2,299,117	-				+0.3
2,299,117	-				+0.3
2,299,332	+				-0.6
2,299,340	-				+0.8
2,299,405	-		DVU2203	0.25	-0.3
2,299,533	-		DVU2203	0.59	+0.2
2,299,644	-		DVU2203	0.89	+2.3
2,299,654	+				+1.0
2,299,806	+				-0.1
2,299,862	-				+0.1
2,299,864	-				+0.6
2,299,922	+				-0.2
2,299,996	+	tnaA	DVU2204	0.14	-0.6
2,300,010	-	tnaA	DVU2204	0.15	-1.1
2,300,061	+	tnaA	DVU2204	0.19	+0.9
2,300,062	-	tnaA	DVU2204	0.19	-0.8
2,300,075	+	tnaA	DVU2204	0.20	-0.2
2,300,083	-	tnaA	DVU2204	0.21	-0.2
2,300,111	+	tnaA	DVU2204	0.23	-0.3
2,300,113	-	tnaA	DVU2204	0.23	-0.3
2,300,240	-	tnaA	DVU2204	0.32	+1.0
2,300,285	-	tnaA	DVU2204	0.35	-0.2
2,300,430	+	tnaA	DVU2204	0.46	-1.1
2,300,430	+	tnaA	DVU2204	0.46	-0.9
2,300,488	+	tnaA	DVU2204	0.50	-0.4
2,300,488	+	tnaA	DVU2204	0.50	+0.4
2,300,488	+	tnaA	DVU2204	0.50	-0.6
2,300,550	+	tnaA	DVU2204	0.54	-0.0
2,300,563	-	tnaA	DVU2204	0.55	-0.1
2,300,579	-	tnaA	DVU2204	0.56	-0.0
2,300,724	-	tnaA	DVU2204	0.67	-0.1
2,300,747	-	tnaA	DVU2204	0.68	-0.2
2,300,763	+	tnaA	DVU2204	0.70	+0.1
2,300,987	+	tnaA	DVU2204	0.86	-0.3
2,301,202	-				-0.7
2,301,278	-				+0.8
2,301,326	+				+0.0
2,301,326	+				+0.1
2,301,328	+				-0.2
2,301,328	+				-0.8
2,301,336	-				+0.5
2,301,336	-				-1.9
2,301,371	-				-0.9
2,301,426	-				-1.0
2,301,463	+				-1.6
2,301,498	-	mtr	DVU2205	0.11	-0.0
2,301,590	-	mtr	DVU2205	0.18	-0.2
2,301,601	+	mtr	DVU2205	0.19	+0.2
2,301,621	+	mtr	DVU2205	0.21	-0.1
2,301,629	-	mtr	DVU2205	0.21	+0.6
2,301,638	-	mtr	DVU2205	0.22	+0.0
2,301,690	-	mtr	DVU2205	0.26	-0.0
2,301,702	-	mtr	DVU2205	0.27	+0.1
2,301,827	+	mtr	DVU2205	0.37	+0.3
2,302,047	+	mtr	DVU2205	0.54	-0.1
2,302,055	-	mtr	DVU2205	0.55	-2.2
2,302,099	-	mtr	DVU2205	0.58	-0.3
2,302,099	-	mtr	DVU2205	0.58	-0.4
2,302,114	+	mtr	DVU2205	0.59	-0.7