Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1950

Experiment: Hydrogen/Acetate-Sulfite (90%atm/5mM-20mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydrogen/Acetate-Sulfite (90%atm/5mM-20mM)
2,021,689	-	nifA-1	DVU1949	0.38	-0.6
2,021,843	+	nifA-1	DVU1949	0.48	-1.1
2,021,937	-	nifA-1	DVU1949	0.54	-1.5
2,021,938	-	nifA-1	DVU1949	0.54	+1.0
2,021,995	-	nifA-1	DVU1949	0.57	-3.1
2,022,588	-				-0.4
2,022,861	+		DVU1950	0.31	+1.0
2,022,885	+		DVU1950	0.35	+1.1
2,022,988	-		DVU1950	0.52	-0.2
2,022,991	+		DVU1950	0.53	+0.7
2,022,999	-		DVU1950	0.54	-0.2
2,022,999	-		DVU1950	0.54	+0.8
2,023,045	-		DVU1950	0.62	+0.1
2,023,047	+		DVU1950	0.62	+0.6
2,023,204	-		DVU1950	0.88	-0.3
2,023,209	-		DVU1950	0.89	+0.3
2,023,214	+				+1.1
2,023,231	-				+0.1
2,023,242	+				+0.5
2,023,267	+				+0.4
2,023,415	+				+0.5
2,023,417	+				-1.4
2,023,460	+		DVU1951	0.10	+1.0
2,023,527	-		DVU1951	0.14	+0.3
2,023,531	+		DVU1951	0.14	+0.1
2,023,680	-		DVU1951	0.22	+1.4
2,023,807	+		DVU1951	0.29	+1.1
2,023,815	-		DVU1951	0.29	+0.4
2,023,895	-		DVU1951	0.34	+0.8
2,023,936	-		DVU1951	0.36	+0.6
2,023,977	-		DVU1951	0.38	+0.3