Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1457

Experiment: Hydrogen/Acetate-Sulfite (90%atm/5mM-20mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydrogen/Acetate-Sulfite (90%atm/5mM-20mM)
1,535,357	+		DVU1456	0.36	-0.6
1,535,482	-		DVU1456	0.48	+1.6
1,535,539	+		DVU1456	0.54	-0.6
1,535,557	-		DVU1456	0.56	-0.4
1,535,575	+		DVU1456	0.58	-0.4
1,535,575	-		DVU1456	0.58	+0.6
1,535,582	-		DVU1456	0.58	-0.6
1,535,745	-		DVU1456	0.74	-1.6
1,535,764	-		DVU1456	0.76	-2.1
1,535,776	-		DVU1456	0.77	-2.2
1,536,073	-				-0.5
1,536,275	-				+0.0
1,536,294	-				-0.8
1,536,296	+				-0.8
1,536,302	+				-0.6
1,536,315	-				-0.7
1,536,334	-				-1.0
1,536,404	-	trxB	DVU1457	0.17	-0.9
1,536,415	-	trxB	DVU1457	0.18	-1.7
1,536,558	+	trxB	DVU1457	0.33	-1.2
1,536,602	-	trxB	DVU1457	0.38	-0.8
1,536,634	+	trxB	DVU1457	0.42	-2.0
1,536,691	+	trxB	DVU1457	0.48	-1.4
1,536,699	+	trxB	DVU1457	0.49	-2.6
1,536,699	-	trxB	DVU1457	0.49	-3.2
1,536,749	-	trxB	DVU1457	0.54	-0.7
1,536,776	+	trxB	DVU1457	0.57	-1.0
1,536,804	-	trxB	DVU1457	0.60	+0.2
1,536,805	+	trxB	DVU1457	0.60	-0.6
1,536,891	+	trxB	DVU1457	0.69	-0.9
1,536,965	-	trxB	DVU1457	0.77	-0.9
1,537,026	-	trxB	DVU1457	0.84	-0.9
1,537,065	+	trxB	DVU1457	0.88	-0.5
1,537,071	+	trxB	DVU1457	0.89	-1.2
1,537,112	+				+2.0
1,537,208	+				-0.2
1,537,289	+				-1.5
1,537,297	-				-0.3
1,537,325	+				-0.2
1,537,338	-				+0.4
1,537,360	+				-0.9
1,537,376	+				+0.1
1,537,430	-				-1.4
1,537,621	-		DVU1458	0.19	-0.2
1,537,626	+		DVU1458	0.20	+0.1
1,537,696	+		DVU1458	0.29	+0.9
1,537,728	-		DVU1458	0.34	+0.6
1,537,772	+		DVU1458	0.39	+0.0
1,537,780	-		DVU1458	0.41	-0.1
1,537,799	-		DVU1458	0.43	+0.5
1,537,811	+		DVU1458	0.45	-0.0
1,537,811	+		DVU1458	0.45	+0.1
1,537,811	+		DVU1458	0.45	-0.2
1,537,819	-		DVU1458	0.46	-0.4
1,537,819	-		DVU1458	0.46	+0.3
1,537,971	+		DVU1458	0.66	-0.0
1,537,979	-		DVU1458	0.67	-0.3
1,538,028	-		DVU1458	0.74	+0.7