Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1377

Experiment: Hydrogen/Acetate-Sulfite (90%atm/5mM-20mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydrogen/Acetate-Sulfite (90%atm/5mM-20mM)
1,452,568	-	ilvB-2	DVU1376	0.61	-0.7
1,452,568	-	ilvB-2	DVU1376	0.61	-1.5
1,452,568	-	ilvB-2	DVU1376	0.61	-1.9
1,452,568	-	ilvB-2	DVU1376	0.61	-2.2
1,452,717	-	ilvB-2	DVU1376	0.69	-0.8
1,452,746	+	ilvB-2	DVU1376	0.71	-2.6
1,452,746	+	ilvB-2	DVU1376	0.71	-1.6
1,452,746	+	ilvB-2	DVU1376	0.71	+1.0
1,452,746	+	ilvB-2	DVU1376	0.71	-0.9
1,452,746	+	ilvB-2	DVU1376	0.71	-2.5
1,453,110	-				-1.5
1,453,158	-				-2.2
1,453,247	-				+0.1
1,453,249	+				-1.2
1,453,376	+	ilvN-2	DVU1377	0.27	-1.5
1,453,486	+	ilvN-2	DVU1377	0.49	-0.4
1,453,696	+				-0.7
1,453,701	+				-0.9
1,454,150	-	ilvC	DVU1378	0.30	-1.8
1,454,208	+	ilvC	DVU1378	0.35	-1.8
1,454,305	-	ilvC	DVU1378	0.45	-1.9
1,454,352	-	ilvC	DVU1378	0.50	-1.6
1,454,355	+	ilvC	DVU1378	0.50	-1.0
1,454,378	+	ilvC	DVU1378	0.53	-1.8
1,454,418	-	ilvC	DVU1378	0.57	-1.7
1,454,420	-	ilvC	DVU1378	0.57	-1.9
1,454,420	-	ilvC	DVU1378	0.57	-1.9
1,454,477	-	ilvC	DVU1378	0.62	-1.6
1,454,600	-	ilvC	DVU1378	0.75	+0.8
1,454,711	-	ilvC	DVU1378	0.86	-1.6