Experiment: Hydrogen/Acetate-Sulfite (90%atm/5mM-20mM)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0863 and DVU0864 are separated by 137 nucleotides DVU0864 and DVU0865 overlap by 4 nucleotides
DVU0863: DVU0863 - flagellar hook-associated protein 2, putative (TIGR), at 954,684 to 956,411
DVU0863
DVU0864: DVU0864 - glycoprotease family protein, putative (TIGR), at 956,549 to 957,334
DVU0864
DVU0865: DVU0865 - membrane-associated zinc metalloprotease, putative (TIGR), at 957,331 to 958,395
DVU0865
Position (kb) 956
957
958 Strain fitness (log2 ratio) -2
-1
0
1
2 at 955.626 kb on - strand, within DVU0863 at 955.697 kb on + strand, within DVU0863 at 955.705 kb on - strand, within DVU0863 at 955.837 kb on - strand, within DVU0863 at 955.957 kb on + strand, within DVU0863 at 955.975 kb on - strand, within DVU0863 at 955.977 kb on - strand, within DVU0863 at 956.044 kb on - strand, within DVU0863 at 956.136 kb on - strand, within DVU0863 at 956.200 kb on - strand, within DVU0863 at 956.302 kb on - strand at 956.346 kb on - strand at 956.439 kb on - strand at 956.440 kb on - strand at 956.531 kb on + strand at 956.533 kb on + strand at 956.533 kb on + strand at 956.541 kb on - strand at 956.541 kb on - strand at 956.560 kb on - strand at 956.660 kb on + strand, within DVU0864 at 956.683 kb on + strand, within DVU0864 at 956.685 kb on + strand, within DVU0864 at 957.385 kb on - strand at 957.394 kb on - strand at 958.056 kb on - strand, within DVU0865 at 958.128 kb on - strand, within DVU0865 at 958.309 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hydrogen/Acetate-Sulfite (90%atm/5mM-20mM) remove 955,626 - DVU0863 0.55 -0.1 955,697 + DVU0863 0.59 +0.1 955,705 - DVU0863 0.59 +0.1 955,837 - DVU0863 0.67 -0.5 955,957 + DVU0863 0.74 -0.1 955,975 - DVU0863 0.75 +0.1 955,977 - DVU0863 0.75 -0.3 956,044 - DVU0863 0.79 -0.0 956,136 - DVU0863 0.84 -0.0 956,200 - DVU0863 0.88 +0.2 956,302 - +0.0 956,346 - +0.0 956,439 - -2.5 956,440 - +0.2 956,531 + -2.0 956,533 + +0.2 956,533 + -0.2 956,541 - -1.1 956,541 - +0.1 956,560 - -0.2 956,660 + DVU0864 0.14 +0.0 956,683 + DVU0864 0.17 +0.1 956,685 + DVU0864 0.17 +0.5 957,385 - +2.6 957,394 - +0.1 958,056 - DVU0865 0.68 -0.6 958,128 - DVU0865 0.75 -0.3 958,309 - -0.1
Or see this region's nucleotide sequence