Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1623

Experiment: Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM) with 0.1% Yeast Extract

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntpurQ and pyrG are separated by 256 nucleotidespyrG and kdsA are separated by 69 nucleotideskdsA and DVU1625 overlap by 11 nucleotides DVU1622: purQ - phosphoribosylformylglycinamidine synthase I (TIGR), at 1,706,229 to 1,707,038 purQ DVU1623: pyrG - CTP synthase (TIGR), at 1,707,295 to 1,708,938 pyrG DVU1624: kdsA - 2-dehydro-3-deoxyphosphooctonate aldolase (TIGR), at 1,709,008 to 1,709,829 kdsA DVU1625: DVU1625 - phosphatase, YrbI family (TIGR), at 1,709,819 to 1,710,346 DVU1625 Position (kb) 1707 1708 1709Strain fitness (log2 ratio) -1 0 1at 1707.103 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM) with 0.1% Yeast Extract
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1,707,103 + +0.3

Or see this region's nucleotide sequence