Experiment: Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM) with 0.1% Yeast Extract
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt fusA-2 and DORF13417 overlap by 8 nucleotides DORF13417 and DORF13424 overlap by 23 nucleotides DORF13424 and DVU1801 are separated by 82 nucleotides
DVU1799: fusA-2 - translation elongation factor G (TIGR), at 1,859,827 to 1,861,875
fusA-2
DORF13417: DORF13417 - SEED: FIG00603341: hypothetical protein, at 1,861,868 to 1,862,878
DORF13417
DORF13424: DORF13424 - no description, at 1,862,856 to 1,862,999
DORF13424
DVU1801: DVU1801 - hypothetical protein (TIGR), at 1,863,082 to 1,864,269
DVU1801
Position (kb)
1861
1862
1863 Strain fitness (log2 ratio)
-2
-1
0
1 at 1860.995 kb on - strand, within fusA-2 at 1861.070 kb on - strand, within fusA-2 at 1861.072 kb on + strand, within fusA-2 at 1861.080 kb on - strand, within fusA-2 at 1861.080 kb on - strand, within fusA-2 at 1861.080 kb on - strand, within fusA-2 at 1861.101 kb on - strand, within fusA-2 at 1861.184 kb on + strand, within fusA-2 at 1861.283 kb on - strand, within fusA-2 at 1861.283 kb on - strand, within fusA-2 at 1861.288 kb on + strand, within fusA-2 at 1861.312 kb on + strand, within fusA-2 at 1861.332 kb on - strand, within fusA-2 at 1861.440 kb on + strand, within fusA-2 at 1861.549 kb on - strand, within fusA-2 at 1861.690 kb on + strand at 1861.925 kb on - strand at 1862.909 kb on + strand, within DORF13424 at 1863.070 kb on - strand at 1863.238 kb on - strand, within DVU1801 at 1863.407 kb on - strand, within DVU1801 at 1863.449 kb on + strand, within DVU1801 at 1863.449 kb on + strand, within DVU1801 at 1863.449 kb on + strand, within DVU1801 at 1863.459 kb on + strand, within DVU1801 at 1863.467 kb on - strand, within DVU1801 at 1863.526 kb on - strand, within DVU1801 at 1863.535 kb on - strand, within DVU1801 at 1863.564 kb on + strand, within DVU1801 at 1863.672 kb on - strand, within DVU1801 at 1863.863 kb on - strand, within DVU1801 at 1863.873 kb on + strand, within DVU1801
Per-strain Table
Position Strand Gene LocusTag Fraction Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM) with 0.1% Yeast Extract remove 1,860,995 - fusA-2 DVU1799 0.57 -0.7 1,861,070 - fusA-2 DVU1799 0.61 -1.8 1,861,072 + fusA-2 DVU1799 0.61 -0.3 1,861,080 - fusA-2 DVU1799 0.61 -0.1 1,861,080 - fusA-2 DVU1799 0.61 -2.4 1,861,080 - fusA-2 DVU1799 0.61 -0.7 1,861,101 - fusA-2 DVU1799 0.62 +0.8 1,861,184 + fusA-2 DVU1799 0.66 -0.7 1,861,283 - fusA-2 DVU1799 0.71 +0.1 1,861,283 - fusA-2 DVU1799 0.71 -2.1 1,861,288 + fusA-2 DVU1799 0.71 -2.5 1,861,312 + fusA-2 DVU1799 0.72 +0.5 1,861,332 - fusA-2 DVU1799 0.73 -1.5 1,861,440 + fusA-2 DVU1799 0.79 -1.2 1,861,549 - fusA-2 DVU1799 0.84 -0.3 1,861,690 + -0.6 1,861,925 - -0.9 1,862,909 + DORF13424 0.37 -1.1 1,863,070 - -0.2 1,863,238 - DVU1801 0.13 -1.6 1,863,407 - DVU1801 0.27 -0.0 1,863,449 + DVU1801 0.31 -1.6 1,863,449 + DVU1801 0.31 +0.7 1,863,449 + DVU1801 0.31 -2.1 1,863,459 + DVU1801 0.32 +0.5 1,863,467 - DVU1801 0.32 +1.6 1,863,526 - DVU1801 0.37 +0.5 1,863,535 - DVU1801 0.38 +0.6 1,863,564 + DVU1801 0.41 +0.2 1,863,672 - DVU1801 0.50 +0.9 1,863,863 - DVU1801 0.66 +0.3 1,863,873 + DVU1801 0.67 +0.1
Or see this region's nucleotide sequence