Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU_tRNA-Phe-1

Experiment: Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM)
3,421,898	-		DVU3249	0.13	+2.0
3,422,017	+		DVU3249	0.31	-0.1
3,422,017	+		DVU3249	0.31	-0.0
3,422,017	+		DVU3249	0.31	-1.5
3,422,024	-		DVU3249	0.32	-0.4
3,422,025	-		DVU3249	0.32	+0.3
3,422,025	-		DVU3249	0.32	-0.1
3,422,025	-		DVU3249	0.32	-0.7
3,422,053	+		DVU3249	0.36	-1.4
3,422,087	-		DVU3249	0.41	+0.1
3,422,094	-		DVU3249	0.42	-0.2
3,422,118	+		DVU3249	0.46	-1.0
3,422,123	+		DVU3249	0.46	+0.0
3,422,125	+		DVU3249	0.47	+0.4
3,422,133	-		DVU3249	0.48	+0.2
3,422,159	+		DVU3249	0.52	-0.1
3,422,159	+		DVU3249	0.52	-0.5
3,422,159	+		DVU3249	0.52	+1.4
3,422,167	-		DVU3249	0.53	-0.3
3,422,167	-		DVU3249	0.53	-0.0
3,422,167	-		DVU3249	0.53	+0.2
3,422,167	-		DVU3249	0.53	+0.7
3,422,167	-		DVU3249	0.53	+0.6
3,422,167	-		DVU3249	0.53	-0.3
3,422,167	-		DVU3249	0.53	-2.2
3,422,167	-		DVU3249	0.53	+0.5
3,422,167	-		DVU3249	0.53	+0.2
3,422,213	+		DVU3249	0.60	-0.7
3,422,213	+		DVU3249	0.60	-0.9
3,422,290	-		DVU3249	0.71	-0.3
3,422,361	-		DVU3249	0.81	+0.1
3,422,468	-				-0.1
3,422,621	-				+0.2
3,422,649	-				+0.3
3,422,649	-				-0.1
3,422,661	+				+0.3
3,422,704	-				+1.2
3,422,790	-				-0.2
3,422,812	+				-0.1
3,422,827	-				+0.4
3,422,829	+				-0.1
3,422,840	-				-0.7
3,422,848	-				+1.8
3,422,848	-				-0.3
3,423,089	+				+0.0
3,423,217	-		DVU3250	0.18	+0.3
3,423,234	-		DVU3250	0.21	+0.3
3,423,329	+		DVU3250	0.36	-0.1
3,423,329	+		DVU3250	0.36	+0.4
3,423,334	+		DVU3250	0.36	+1.4
3,423,337	-		DVU3250	0.37	+0.3
3,423,374	-		DVU3250	0.42	+0.4
3,423,381	+		DVU3250	0.44	+0.3
3,423,434	+		DVU3250	0.52	+0.7
3,423,447	-		DVU3250	0.54	+0.6
3,423,550	+		DVU3250	0.70	+0.4
3,423,553	-		DVU3250	0.70	+0.8
3,423,603	+		DVU3250	0.78	+1.9
3,423,603	+		DVU3250	0.78	-2.0
3,423,604	+		DVU3250	0.78	-0.3
3,423,605	-		DVU3250	0.78	+0.7
3,423,611	-		DVU3250	0.79	+0.4
3,423,675	+		DVU3250	0.89	+1.0
3,423,699	-				-0.1
3,423,742	+				-0.3
3,423,876	+				-1.7