Experiment: Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0278 and DVU0279 are separated by 324 nucleotides DVU0279 and wbaZ-2 are separated by 312 nucleotides
DVU0278: DVU0278 - glyoxalase family protein (TIGR), at 321,631 to 322,053
DVU0278
DVU0279: DVU0279 - sulfate permease family protein (TIGR), at 322,378 to 324,084
DVU0279
DVU0280: wbaZ-2 - glycosyl transferase, group 1 family protein (TIGR), at 324,397 to 325,536
wbaZ-2
Position (kb) 322
323
324
325 Strain fitness (log2 ratio) -1
0
1
2
3 at 321.441 kb on + strand at 321.497 kb on - strand at 321.570 kb on + strand at 321.674 kb on - strand, within DVU0278 at 321.767 kb on - strand, within DVU0278 at 321.807 kb on - strand, within DVU0278 at 321.837 kb on + strand, within DVU0278 at 321.837 kb on + strand, within DVU0278 at 321.842 kb on + strand, within DVU0278 at 321.845 kb on - strand, within DVU0278 at 321.907 kb on - strand, within DVU0278 at 321.909 kb on + strand, within DVU0278 at 321.909 kb on + strand, within DVU0278 at 321.915 kb on + strand, within DVU0278 at 321.948 kb on - strand, within DVU0278 at 321.970 kb on + strand, within DVU0278 at 322.011 kb on + strand at 322.059 kb on + strand at 322.067 kb on - strand at 322.067 kb on - strand at 322.074 kb on + strand at 322.082 kb on + strand at 322.107 kb on - strand at 322.138 kb on + strand at 322.146 kb on - strand at 322.323 kb on + strand at 322.351 kb on - strand at 322.435 kb on + strand at 322.447 kb on + strand at 322.666 kb on - strand, within DVU0279 at 322.699 kb on - strand, within DVU0279 at 322.704 kb on - strand, within DVU0279 at 322.718 kb on - strand, within DVU0279 at 322.725 kb on + strand, within DVU0279 at 322.899 kb on - strand, within DVU0279 at 322.900 kb on + strand, within DVU0279 at 323.038 kb on + strand, within DVU0279 at 323.059 kb on - strand, within DVU0279 at 323.101 kb on - strand, within DVU0279 at 323.116 kb on - strand, within DVU0279 at 323.129 kb on + strand, within DVU0279 at 323.197 kb on + strand, within DVU0279 at 323.212 kb on - strand, within DVU0279 at 323.382 kb on - strand, within DVU0279 at 323.469 kb on - strand, within DVU0279 at 323.485 kb on - strand, within DVU0279 at 323.544 kb on - strand, within DVU0279 at 323.623 kb on - strand, within DVU0279 at 323.655 kb on + strand, within DVU0279 at 323.663 kb on - strand, within DVU0279 at 323.663 kb on - strand, within DVU0279 at 323.705 kb on - strand, within DVU0279 at 323.710 kb on + strand, within DVU0279 at 323.721 kb on + strand, within DVU0279 at 323.736 kb on + strand, within DVU0279 at 323.736 kb on - strand, within DVU0279 at 323.852 kb on - strand, within DVU0279 at 323.852 kb on - strand, within DVU0279 at 323.884 kb on - strand, within DVU0279 at 323.884 kb on - strand, within DVU0279 at 323.906 kb on - strand, within DVU0279 at 323.925 kb on + strand at 323.945 kb on - strand at 324.032 kb on + strand at 324.057 kb on + strand at 324.065 kb on - strand at 324.074 kb on + strand at 324.077 kb on - strand at 324.079 kb on + strand at 324.082 kb on - strand at 324.169 kb on - strand at 324.183 kb on + strand at 324.183 kb on + strand at 324.183 kb on + strand at 324.191 kb on - strand at 324.191 kb on - strand at 324.325 kb on - strand at 324.561 kb on + strand, within wbaZ-2 at 324.640 kb on + strand, within wbaZ-2 at 324.712 kb on + strand, within wbaZ-2 at 324.712 kb on + strand, within wbaZ-2 at 324.824 kb on - strand, within wbaZ-2 at 324.868 kb on + strand, within wbaZ-2 at 324.982 kb on + strand, within wbaZ-2
Per-strain Table
Position Strand Gene LocusTag Fraction Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM) remove 321,441 + +1.0 321,497 - +0.0 321,570 + +1.6 321,674 - DVU0278 0.10 -0.1 321,767 - DVU0278 0.32 +2.5 321,807 - DVU0278 0.42 -0.3 321,837 + DVU0278 0.49 +0.4 321,837 + DVU0278 0.49 -0.8 321,842 + DVU0278 0.50 +0.1 321,845 - DVU0278 0.51 -0.1 321,907 - DVU0278 0.65 -0.7 321,909 + DVU0278 0.66 +0.1 321,909 + DVU0278 0.66 -0.2 321,915 + DVU0278 0.67 +1.0 321,948 - DVU0278 0.75 +0.4 321,970 + DVU0278 0.80 +0.1 322,011 + -0.2 322,059 + +3.2 322,067 - +1.5 322,067 - -0.1 322,074 + -0.5 322,082 + -0.1 322,107 - -0.4 322,138 + +2.2 322,146 - -0.3 322,323 + -0.4 322,351 - -0.4 322,435 + +0.2 322,447 + -0.0 322,666 - DVU0279 0.17 -0.1 322,699 - DVU0279 0.19 +0.6 322,704 - DVU0279 0.19 -0.4 322,718 - DVU0279 0.20 +0.0 322,725 + DVU0279 0.20 +0.5 322,899 - DVU0279 0.31 -0.2 322,900 + DVU0279 0.31 +0.4 323,038 + DVU0279 0.39 +0.2 323,059 - DVU0279 0.40 +1.0 323,101 - DVU0279 0.42 +0.6 323,116 - DVU0279 0.43 +0.5 323,129 + DVU0279 0.44 +0.3 323,197 + DVU0279 0.48 +0.6 323,212 - DVU0279 0.49 +0.3 323,382 - DVU0279 0.59 +1.9 323,469 - DVU0279 0.64 +0.2 323,485 - DVU0279 0.65 +0.4 323,544 - DVU0279 0.68 +0.0 323,623 - DVU0279 0.73 +0.8 323,655 + DVU0279 0.75 -0.3 323,663 - DVU0279 0.75 -1.0 323,663 - DVU0279 0.75 +1.7 323,705 - DVU0279 0.78 +0.0 323,710 + DVU0279 0.78 +0.4 323,721 + DVU0279 0.79 +0.6 323,736 + DVU0279 0.80 +0.5 323,736 - DVU0279 0.80 +0.3 323,852 - DVU0279 0.86 +2.2 323,852 - DVU0279 0.86 +0.0 323,884 - DVU0279 0.88 +2.9 323,884 - DVU0279 0.88 +1.2 323,906 - DVU0279 0.90 +0.7 323,925 + +0.3 323,945 - -0.5 324,032 + +0.4 324,057 + -0.2 324,065 - +0.4 324,074 + +0.1 324,077 - +0.4 324,079 + -0.2 324,082 - +1.6 324,169 - +0.2 324,183 + -0.3 324,183 + -0.4 324,183 + +0.1 324,191 - +1.3 324,191 - -0.1 324,325 - +0.0 324,561 + wbaZ-2 DVU0280 0.14 +3.6 324,640 + wbaZ-2 DVU0280 0.21 +0.6 324,712 + wbaZ-2 DVU0280 0.28 +1.0 324,712 + wbaZ-2 DVU0280 0.28 +2.6 324,824 - wbaZ-2 DVU0280 0.37 +2.6 324,868 + wbaZ-2 DVU0280 0.41 +1.6 324,982 + wbaZ-2 DVU0280 0.51 +1.0
Or see this region's nucleotide sequence