Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3142

Experiment: Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM)
3,289,129	+				-0.3
3,289,160	+				+0.2
3,289,168	-				+1.6
3,289,170	+				+0.1
3,289,170	+				+0.0
3,289,177	+				-0.2
3,289,183	+				-0.2
3,289,191	-				+0.0
3,289,212	-				-0.4
3,289,308	-				-0.2
3,289,375	+				-0.1
3,289,401	+				-0.5
3,289,409	-				+1.3
3,289,412	+				+0.1
3,289,449	+				-0.2
3,289,456	+				-0.5
3,289,480	-				-1.2
3,289,480	-				+1.1
3,289,519	+				+0.6
3,289,521	+				-0.7
3,289,521	+				-1.0
3,289,591	+		DVU3141	0.20	-0.4
3,289,634	+		DVU3141	0.31	-0.1
3,289,634	+		DVU3141	0.31	-1.3
3,289,634	+		DVU3141	0.31	-0.4
3,289,877	+				+0.6
3,289,880	-				-0.5
3,289,937	+				+0.0
3,289,938	+				-0.7
3,289,938	+				-0.1
3,290,003	+				+0.1
3,290,017	+				-0.9
3,290,020	+				-0.0
3,290,023	-				+1.0
3,290,025	-				+1.9
3,290,044	+				-0.0
3,290,109	+				-0.0
3,290,117	-				-0.4
3,290,136	+				-0.4
3,290,149	-				-0.1
3,290,174	-				-0.7
3,290,196	-				-0.2
3,290,261	+				-0.4
3,290,341	-		DVU3142	0.13	-0.5
3,290,406	-		DVU3142	0.17	+0.2
3,290,485	+		DVU3142	0.22	-2.5
3,290,493	+		DVU3142	0.22	+0.6
3,290,560	-		DVU3142	0.26	-0.3
3,290,582	+		DVU3142	0.27	-0.3
3,290,690	+		DVU3142	0.34	-0.7
3,290,698	+		DVU3142	0.34	-0.4
3,290,700	+		DVU3142	0.34	-0.4
3,290,700	+		DVU3142	0.34	-0.4
3,290,700	+		DVU3142	0.34	-1.3
3,290,708	-		DVU3142	0.35	-0.7
3,290,771	-		DVU3142	0.38	-1.3
3,290,799	+		DVU3142	0.40	-0.7
3,290,834	-		DVU3142	0.42	-0.7
3,290,940	-		DVU3142	0.48	-0.8
3,290,989	-		DVU3142	0.51	-0.4
3,291,011	+		DVU3142	0.52	-0.3
3,291,103	-		DVU3142	0.58	-0.3
3,291,120	-		DVU3142	0.59	+0.2
3,291,132	+		DVU3142	0.60	-1.2
3,291,365	-		DVU3142	0.73	-0.7
3,291,386	-		DVU3142	0.74	-1.1
3,291,386	-		DVU3142	0.74	-0.5
3,291,398	+		DVU3142	0.75	-0.1
3,291,401	-		DVU3142	0.75	-0.4
3,291,406	-		DVU3142	0.76	-2.0
3,291,406	-		DVU3142	0.76	-0.0
3,291,444	+		DVU3142	0.78	-0.0
3,291,495	+		DVU3142	0.81	-0.3
3,291,500	+		DVU3142	0.81	-1.3
3,291,547	-		DVU3142	0.84	-0.5
3,291,565	+		DVU3142	0.85	+0.5
3,291,573	-		DVU3142	0.85	-0.6
3,291,587	-		DVU3142	0.86	-0.3
3,291,672	-				-0.7
3,291,681	-				-0.4
3,291,711	+				-0.0
3,291,754	+				-0.3
3,291,811	+				+1.5
3,291,821	-				-0.3
3,291,842	+				+1.0
3,291,850	+				+0.9
3,291,850	-				+1.1
3,291,868	+				+0.8
3,291,876	+				+0.9
3,291,940	-				+0.6
3,292,090	+				+1.4
3,292,133	+				+0.2
3,292,209	-				-0.5
3,292,245	+				-0.8
3,292,361	+		DVU3143	0.15	-0.3
3,292,383	+		DVU3143	0.16	+0.7
3,292,421	+		DVU3143	0.19	+0.6
3,292,448	+		DVU3143	0.20	-0.8
3,292,448	+		DVU3143	0.20	-1.2
3,292,448	+		DVU3143	0.20	-0.3
3,292,456	+		DVU3143	0.21	-0.4
3,292,456	-		DVU3143	0.21	+1.0
3,292,525	+		DVU3143	0.25	-0.6
3,292,534	+		DVU3143	0.26	-0.8
3,292,544	+		DVU3143	0.26	-1.1
3,292,573	-		DVU3143	0.28	-2.2
3,292,574	-		DVU3143	0.28	-1.2
3,292,614	-		DVU3143	0.31	-0.4
3,292,631	+		DVU3143	0.32	-0.4
3,292,639	-		DVU3143	0.32	+1.5
3,292,650	-		DVU3143	0.33	+0.2
3,292,657	+		DVU3143	0.34	-0.6
3,292,663	+		DVU3143	0.34	-1.7
3,292,665	-		DVU3143	0.34	-1.1
3,292,698	+		DVU3143	0.36	+2.2
3,292,803	+		DVU3143	0.43	-1.5
3,292,817	-		DVU3143	0.44	-0.6