Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2784

Experiment: Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM)
2,888,562	-				-1.6
2,888,580	-				-2.7
2,888,969	+		DVU2783	0.51	-1.3
2,889,002	+		DVU2783	0.56	+0.8
2,889,004	+		DVU2783	0.56	-0.5
2,889,037	+		DVU2783	0.60	-0.5
2,889,137	+		DVU2783	0.72	-0.6
2,889,137	+		DVU2783	0.72	-0.9
2,889,137	+		DVU2783	0.72	-1.4
2,889,174	+		DVU2783	0.77	+0.6
2,889,179	+		DVU2783	0.78	-1.1
2,889,180	-		DVU2783	0.78	-0.6
2,889,184	+		DVU2783	0.78	-0.4
2,889,197	-		DVU2783	0.80	+1.6
2,889,211	+		DVU2783	0.82	-1.1
2,889,221	-		DVU2783	0.83	-0.0
2,889,227	+		DVU2783	0.84	+0.0
2,889,313	+				-0.8
2,889,376	+				-0.6
2,889,376	+				-1.1
2,889,376	+				-0.7
2,889,376	+				+0.3
2,889,384	-				+0.2
2,889,384	-				-0.9
2,889,423	+				-0.2
2,889,469	+	lldD	DVU2784	0.10	-1.1
2,889,476	+	lldD	DVU2784	0.11	+1.6
2,889,618	-	lldD	DVU2784	0.25	+0.2
2,889,640	-	lldD	DVU2784	0.27	-0.7
2,889,664	-	lldD	DVU2784	0.29	-1.0
2,889,711	+	lldD	DVU2784	0.34	-0.2
2,889,750	-	lldD	DVU2784	0.38	-1.7
2,889,750	-	lldD	DVU2784	0.38	+2.2
2,889,762	+	lldD	DVU2784	0.39	-1.7
2,889,762	+	lldD	DVU2784	0.39	-1.2
2,889,805	+	lldD	DVU2784	0.43	-1.7
2,889,823	-	lldD	DVU2784	0.45	-2.1
2,889,908	+	lldD	DVU2784	0.53	-0.4
2,889,938	-	lldD	DVU2784	0.56	-1.0
2,889,941	+	lldD	DVU2784	0.56	-0.7
2,889,967	-	lldD	DVU2784	0.59	-1.2
2,890,032	-	lldD	DVU2784	0.65	-1.2
2,890,056	+	lldD	DVU2784	0.67	-0.2
2,890,064	-	lldD	DVU2784	0.68	-1.1
2,890,079	-	lldD	DVU2784	0.70	-1.2
2,890,082	+	lldD	DVU2784	0.70	-0.9
2,890,090	-	lldD	DVU2784	0.71	-1.0
2,890,097	-	lldD	DVU2784	0.71	-1.1
2,890,151	+	lldD	DVU2784	0.77	-0.5
2,890,159	-	lldD	DVU2784	0.77	+0.5
2,890,174	-	lldD	DVU2784	0.79	-0.8
2,890,194	-	lldD	DVU2784	0.81	-1.0
2,890,211	-	lldD	DVU2784	0.83	-1.3
2,890,251	-	lldD	DVU2784	0.86	-0.8
2,890,307	-				+1.1
2,890,393	+				-0.6
2,890,401	-				-0.3
2,890,431	+				-0.4
2,890,450	+				-0.4
2,890,503	+				-0.2
2,890,503	+				-0.6
2,890,506	-				-1.1
2,890,610	+	pdhR	DVU2785	0.14	-0.0
2,890,610	+	pdhR	DVU2785	0.14	-1.4
2,890,774	-	pdhR	DVU2785	0.37	+0.0
2,890,867	+	pdhR	DVU2785	0.50	-0.4
2,890,985	+	pdhR	DVU2785	0.66	-0.2
2,891,209	+				+0.8
2,891,242	+				-1.6