Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2742

Experiment: Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM)
2,846,673	+				+1.1
2,846,727	+	livG	DVU2741	0.10	+0.4
2,846,758	+	livG	DVU2741	0.14	+0.8
2,846,776	+	livG	DVU2741	0.17	+2.2
2,846,930	+	livG	DVU2741	0.37	-0.4
2,847,021	-	livG	DVU2741	0.49	+0.0
2,847,083	-	livG	DVU2741	0.57	+0.7
2,847,085	+	livG	DVU2741	0.57	+1.1
2,847,085	+	livG	DVU2741	0.57	+0.6
2,847,087	+	livG	DVU2741	0.57	+0.4
2,847,087	+	livG	DVU2741	0.57	+0.2
2,847,087	+	livG	DVU2741	0.57	+0.4
2,847,094	-	livG	DVU2741	0.58	+0.2
2,847,095	-	livG	DVU2741	0.58	+0.8
2,847,107	-	livG	DVU2741	0.60	+0.7
2,847,139	+	livG	DVU2741	0.64	+0.5
2,847,175	-	livG	DVU2741	0.69	+0.6
2,847,179	+	livG	DVU2741	0.69	-1.3
2,847,371	-				-3.8
2,847,498	+				+4.2
2,847,501	-				-0.2
2,847,506	-				-0.7
2,847,556	+	livM	DVU2742	0.12	+2.3
2,847,583	+	livM	DVU2742	0.15	-0.2
2,847,583	+	livM	DVU2742	0.15	+0.4
2,847,583	+	livM	DVU2742	0.15	+0.3
2,847,583	+	livM	DVU2742	0.15	+0.0
2,847,591	-	livM	DVU2742	0.15	-1.2
2,847,591	-	livM	DVU2742	0.15	+1.0
2,847,591	-	livM	DVU2742	0.15	+0.4
2,847,762	+	livM	DVU2742	0.31	+0.6
2,847,939	+	livM	DVU2742	0.48	+0.4
2,847,961	+	livM	DVU2742	0.50	+1.3
2,847,995	+	livM	DVU2742	0.53	+0.2
2,848,062	-	livM	DVU2742	0.59	+0.4
2,848,196	-	livM	DVU2742	0.72	+0.8
2,848,210	-	livM	DVU2742	0.73	+0.8
2,848,219	+	livM	DVU2742	0.74	+0.0
2,848,224	+	livM	DVU2742	0.74	-0.1
2,848,232	-	livM	DVU2742	0.75	+0.8
2,848,247	-	livM	DVU2742	0.76	+1.0
2,848,363	+	livM	DVU2742	0.87	+0.7
2,848,460	+				-0.1
2,848,488	+				+0.6
2,848,488	+				-0.1
2,848,494	-				-0.7
2,848,502	+				-0.1
2,848,522	+				+0.9
2,848,556	+				+0.4
2,848,564	-				+0.0
2,848,587	-				-0.2
2,848,587	-				+1.5
2,848,623	+	livH	DVU2743	0.11	+0.3
2,848,768	+	livH	DVU2743	0.26	-0.2
2,848,768	+	livH	DVU2743	0.26	+1.3
2,848,768	+	livH	DVU2743	0.26	-0.7
2,848,776	-	livH	DVU2743	0.27	+0.2
2,848,776	-	livH	DVU2743	0.27	+2.3
2,848,780	+	livH	DVU2743	0.28	-0.2
2,848,788	-	livH	DVU2743	0.29	+1.2
2,848,835	-	livH	DVU2743	0.34	-1.0
2,848,848	-	livH	DVU2743	0.35	+0.6
2,848,932	+	livH	DVU2743	0.44	+0.4
2,849,002	+	livH	DVU2743	0.52	+0.0
2,849,019	-	livH	DVU2743	0.54	+1.6
2,849,145	+	livH	DVU2743	0.67	+0.7
2,849,223	+	livH	DVU2743	0.76	+2.5
2,849,230	-	livH	DVU2743	0.77	+0.1
2,849,284	-	livH	DVU2743	0.83	+0.2
2,849,322	-	livH	DVU2743	0.87	-0.0
2,849,355	+				+2.4
2,849,356	+				+1.0
2,849,356	+				+0.0
2,849,356	-				+0.6
2,849,368	+				+0.0