Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2608

Experiment: Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM)
2,725,974	+		DVU2606	0.37	+1.0
2,726,031	+		DVU2606	0.56	-2.0
2,726,211	-				+0.4
2,726,254	+				-2.2
2,726,286	+				+3.2
2,726,419	+		DVU2607	0.24	-0.4
2,726,419	+		DVU2607	0.24	-0.1
2,726,427	-		DVU2607	0.25	-0.1
2,726,427	-		DVU2607	0.25	+0.9
2,726,614	-		DVU2607	0.55	+0.5
2,726,695	+		DVU2607	0.68	+2.6
2,726,695	+		DVU2607	0.68	-0.0
2,726,715	-		DVU2607	0.71	+0.1
2,726,851	+				+1.2
2,726,873	-				+1.3
2,727,078	-	motA-3	DVU2608	0.20	-0.9
2,727,102	+	motA-3	DVU2608	0.22	+0.9
2,727,155	+	motA-3	DVU2608	0.29	+2.1
2,727,192	+	motA-3	DVU2608	0.33	+1.7
2,727,197	-	motA-3	DVU2608	0.34	+1.9
2,727,200	-	motA-3	DVU2608	0.34	+1.9
2,727,212	-	motA-3	DVU2608	0.35	+2.0
2,727,284	+	motA-3	DVU2608	0.44	+1.3
2,727,284	+	motA-3	DVU2608	0.44	+1.8
2,727,284	+	motA-3	DVU2608	0.44	+1.7
2,727,388	-	motA-3	DVU2608	0.56	+1.7
2,727,407	+	motA-3	DVU2608	0.58	+0.4
2,727,438	-	motA-3	DVU2608	0.62	+1.8
2,727,535	-	motA-3	DVU2608	0.74	+1.7
2,727,620	+	motA-3	DVU2608	0.84	+1.7
2,727,661	+	motA-3	DVU2608	0.88	+1.8
2,727,669	-	motA-3	DVU2608	0.89	+1.8
2,727,684	+				+1.9
2,727,799	+				+2.2
2,727,893	-		DVU2609	0.15	+2.1
2,727,893	-		DVU2609	0.15	+2.0
2,727,935	+		DVU2609	0.20	+2.8
2,728,000	+		DVU2609	0.29	+1.5
2,728,037	+		DVU2609	0.34	+1.6
2,728,416	+		DVU2609	0.86	+1.6
2,728,510	+				+0.3
2,728,518	-				+0.1
2,728,527	-				-0.1
2,728,557	-				-0.4
2,728,583	+				+0.1
2,728,620	+		DVU2610	0.10	-1.2
2,728,711	+		DVU2610	0.24	+0.2
2,728,719	-		DVU2610	0.25	-0.9
2,728,732	+		DVU2610	0.27	-0.1
2,728,734	-		DVU2610	0.27	-0.1