Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2400

Experiment: Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM)
2,502,866	-				+0.2
2,502,932	+				+0.1
2,502,937	+				-0.6
2,502,937	+				+0.4
2,502,945	-				-1.7
2,502,945	-				+0.4
2,502,980	+				+1.8
2,502,995	-				+1.8
2,502,995	-				+1.3
2,502,995	-				+0.6
2,503,081	+		DVU2399	0.15	+2.1
2,503,177	+		DVU2399	0.25	+2.6
2,503,185	-		DVU2399	0.26	+0.8
2,503,330	-		DVU2399	0.43	+1.1
2,503,330	-		DVU2399	0.43	+1.0
2,503,347	-		DVU2399	0.45	+2.6
2,503,347	-		DVU2399	0.45	+1.7
2,503,349	+		DVU2399	0.45	+1.9
2,503,349	+		DVU2399	0.45	+1.9
2,503,374	+		DVU2399	0.48	+1.4
2,503,725	+		DVU2399	0.87	-2.2
2,503,735	+		DVU2399	0.88	+2.4
2,503,735	+		DVU2399	0.88	-0.9
2,503,735	+		DVU2399	0.88	+0.9
2,503,743	-		DVU2399	0.89	+1.8
2,503,771	-				+0.4
2,503,781	+				+1.0
2,504,030	-		DVU2400	0.18	+1.4
2,504,058	+		DVU2400	0.21	+2.7
2,504,267	-		DVU2400	0.40	+2.1
2,504,452	+		DVU2400	0.57	+1.8
2,504,491	-		DVU2400	0.61	+2.3
2,504,545	-		DVU2400	0.66	+2.1
2,504,668	+		DVU2400	0.77	+2.0
2,504,676	-		DVU2400	0.78	+2.6
2,504,759	-		DVU2400	0.86	+1.6
2,504,876	+				+2.9
2,504,899	-				+1.9
2,505,052	-				+0.9
2,505,086	+		DVU2401	0.12	+1.7
2,505,220	-		DVU2401	0.21	+1.9
2,505,258	+		DVU2401	0.23	+1.3
2,505,367	+		DVU2401	0.31	+1.8
2,505,369	+		DVU2401	0.31	+1.9
2,505,375	-		DVU2401	0.31	+2.1
2,505,462	-		DVU2401	0.37	+1.1
2,505,549	+		DVU2401	0.43	+1.9
2,505,575	+		DVU2401	0.45	+0.0
2,505,737	+		DVU2401	0.56	+0.6
2,505,850	+		DVU2401	0.63	+0.2