Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2214

Experiment: Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM)
2,310,080	-				-0.1
2,310,086	-				-0.1
2,310,115	-				-0.6
2,310,143	+				-0.6
2,310,190	-				-0.6
2,310,224	-				-1.2
2,310,265	-				-0.0
2,310,320	-				-0.1
2,310,320	-				-0.3
2,310,351	-		DVU2213	0.12	-0.0
2,310,425	+		DVU2213	0.22	+0.7
2,310,425	+		DVU2213	0.22	-0.0
2,310,425	+		DVU2213	0.22	-0.2
2,310,433	-		DVU2213	0.23	-0.2
2,310,459	+		DVU2213	0.27	-0.2
2,310,466	-		DVU2213	0.28	-0.1
2,310,507	-		DVU2213	0.34	-0.2
2,310,550	-		DVU2213	0.40	+0.4
2,310,598	+		DVU2213	0.47	+0.1
2,310,598	+		DVU2213	0.47	-0.1
2,310,606	-		DVU2213	0.48	+0.6
2,310,606	-		DVU2213	0.48	-0.4
2,310,630	+		DVU2213	0.51	+2.6
2,310,725	+		DVU2213	0.65	-0.4
2,310,740	-		DVU2213	0.67	-0.5
2,310,781	-		DVU2213	0.73	-0.4
2,310,786	-		DVU2213	0.74	-0.2
2,310,817	+		DVU2213	0.78	+0.1
2,310,824	+		DVU2213	0.79	+0.3
2,310,824	+		DVU2213	0.79	-0.5
2,310,824	+		DVU2213	0.79	+0.4
2,310,834	-		DVU2213	0.80	-0.2
2,310,905	+				-0.2
2,310,910	+				-0.5
2,310,918	-				-0.3
2,310,923	-				+0.9
2,310,925	-				+0.0
2,310,938	-				+2.6
2,310,941	+				-0.4
2,310,993	+				-1.7
2,311,083	-		DVU2214	0.19	-0.4
2,311,106	-		DVU2214	0.32	-0.1
2,311,133	+		DVU2214	0.48	-1.8
2,311,156	-		DVU2214	0.61	+0.6
2,311,168	-		DVU2214	0.68	+0.2
2,311,887	+	infA-2	DVU2216	0.61	-1.0
2,311,887	+	infA-2	DVU2216	0.61	-0.8
2,311,929	-	infA-2	DVU2216	0.77	-0.1
2,311,936	+	infA-2	DVU2216	0.80	-0.3
2,311,997	+				-0.8
2,312,081	-				+0.0
2,312,125	+				-0.1