Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2210

Experiment: Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM)
2,304,157	-				-0.7
2,304,159	+				+0.4
2,304,167	-				+0.5
2,304,203	+				-2.2
2,304,203	+				+0.0
2,304,326	+				-0.1
2,304,328	+				+0.1
2,304,400	+		DVU2209	0.11	+0.5
2,304,423	-		DVU2209	0.14	+0.0
2,304,449	+		DVU2209	0.18	-0.9
2,304,584	+		DVU2209	0.36	+0.1
2,304,592	-		DVU2209	0.37	+1.3
2,304,790	+		DVU2209	0.65	-0.6
2,304,876	+		DVU2209	0.77	+1.1
2,304,881	+		DVU2209	0.77	-0.1
2,304,884	+		DVU2209	0.78	+0.1
2,304,889	-		DVU2209	0.79	+0.4
2,304,907	-		DVU2209	0.81	-0.6
2,305,001	-				+2.6
2,305,020	+				+0.3
2,305,070	-				+1.4
2,305,071	+				+0.4
2,305,181	-				+4.0
2,305,307	-		DVU2210	0.15	+3.7
2,305,424	+		DVU2210	0.22	+3.6
2,305,432	-		DVU2210	0.23	+3.8
2,305,481	-		DVU2210	0.26	+2.3
2,305,481	-		DVU2210	0.26	+3.8
2,305,481	-		DVU2210	0.26	+3.5
2,305,530	+		DVU2210	0.28	+3.1
2,305,549	-		DVU2210	0.29	+1.8
2,305,604	-		DVU2210	0.33	+3.5
2,305,621	-		DVU2210	0.34	+2.8
2,305,661	-		DVU2210	0.36	+2.4
2,305,670	-		DVU2210	0.36	+3.9
2,305,710	+		DVU2210	0.39	+2.7
2,305,718	-		DVU2210	0.39	+4.1
2,305,718	-		DVU2210	0.39	+3.2
2,305,718	-		DVU2210	0.39	+3.0
2,305,752	+		DVU2210	0.41	+3.4
2,305,851	-		DVU2210	0.47	+4.5
2,305,882	+		DVU2210	0.49	+3.6
2,305,887	+		DVU2210	0.49	+4.1
2,305,910	-		DVU2210	0.50	+2.7
2,305,950	+		DVU2210	0.53	+1.0
2,305,950	+		DVU2210	0.53	+4.1
2,306,167	-		DVU2210	0.65	+3.8
2,306,290	-		DVU2210	0.72	+3.4
2,306,301	-		DVU2210	0.73	+3.5
2,306,354	-		DVU2210	0.76	+3.4
2,306,441	+		DVU2210	0.81	+3.3
2,306,458	+		DVU2210	0.82	+2.7
2,306,552	-		DVU2210	0.88	+2.4
2,306,582	+		DVU2210	0.89	+3.8
2,306,742	+				+0.5
2,306,891	+				-0.8
2,306,892	+				+0.8
2,306,982	-				+0.7
2,307,002	-				+0.8
2,307,184	-		DVU2211	0.10	-0.1
2,307,184	-		DVU2211	0.10	+0.9
2,307,253	+		DVU2211	0.13	+1.1
2,307,253	+		DVU2211	0.13	+0.6
2,307,302	-		DVU2211	0.15	+1.0
2,307,358	-		DVU2211	0.17	+0.1
2,307,382	+		DVU2211	0.18	+0.7
2,307,437	+		DVU2211	0.20	+0.4
2,307,445	-		DVU2211	0.20	+0.6
2,307,459	-		DVU2211	0.21	+0.5
2,307,487	+		DVU2211	0.22	+0.8
2,307,550	-		DVU2211	0.24	+1.4
2,307,569	+		DVU2211	0.25	+0.8
2,307,651	+		DVU2211	0.28	+1.1
2,307,659	-		DVU2211	0.28	+3.5
2,307,666	-		DVU2211	0.29	+1.0
2,307,700	+		DVU2211	0.30	+0.8