Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2084

Experiment: Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM)
2,170,007	-	relA	DVU2083	0.67	-1.1
2,170,467	+	relA	DVU2083	0.88	+0.2
2,170,499	-	relA	DVU2083	0.89	-0.4
2,170,598	-				-1.3
2,170,598	-				-1.2
2,170,690	-				+1.6
2,170,741	-				+3.3
2,170,905	-	appA	DVU2084	0.10	-0.8
2,170,935	-	appA	DVU2084	0.12	-1.7
2,170,965	+	appA	DVU2084	0.14	-0.7
2,170,990	-	appA	DVU2084	0.15	-0.3
2,171,035	+	appA	DVU2084	0.18	-0.5
2,171,044	+	appA	DVU2084	0.18	+0.6
2,171,046	+	appA	DVU2084	0.19	-1.3
2,171,091	-	appA	DVU2084	0.21	-0.4
2,171,144	+	appA	DVU2084	0.24	+0.2
2,171,341	+	appA	DVU2084	0.36	-1.9
2,171,341	+	appA	DVU2084	0.36	-1.2
2,171,341	+	appA	DVU2084	0.36	-0.0
2,171,341	-	appA	DVU2084	0.36	-0.1
2,171,349	-	appA	DVU2084	0.36	+0.1
2,171,349	-	appA	DVU2084	0.36	-0.4
2,171,351	+	appA	DVU2084	0.37	-0.9
2,171,355	+	appA	DVU2084	0.37	-0.4
2,171,426	-	appA	DVU2084	0.41	-0.3
2,171,582	+	appA	DVU2084	0.50	-0.0
2,171,591	-	appA	DVU2084	0.51	-0.8
2,171,664	+	appA	DVU2084	0.55	+0.1
2,171,669	+	appA	DVU2084	0.55	-1.4
2,171,934	+	appA	DVU2084	0.71	-0.6
2,171,983	+	appA	DVU2084	0.74	-2.4
2,172,016	+	appA	DVU2084	0.76	+0.7
2,172,024	-	appA	DVU2084	0.76	+0.4
2,172,042	+	appA	DVU2084	0.77	-0.4
2,172,050	-	appA	DVU2084	0.78	-0.6
2,172,095	-	appA	DVU2084	0.80	+0.5
2,172,095	-	appA	DVU2084	0.80	-0.6
2,172,095	-	appA	DVU2084	0.80	+0.0
2,172,129	-	appA	DVU2084	0.82	-0.4
2,172,134	-	appA	DVU2084	0.83	-1.0
2,172,322	+				-1.1
2,172,474	-				-0.1
2,172,511	+				+0.3
2,172,511	+				-0.2
2,172,519	-				+0.3
2,172,519	-				+0.7
2,172,560	-				+2.2
2,172,670	-				+3.4
2,172,675	-				+2.6
2,172,865	+				+2.8
2,172,873	-				+2.6
2,172,983	+		DVU2085	0.10	+4.7
2,172,991	-		DVU2085	0.10	+3.5
2,173,038	+		DVU2085	0.12	+3.4
2,173,239	-		DVU2085	0.18	+3.3
2,173,251	-		DVU2085	0.18	+4.7
2,173,283	-		DVU2085	0.19	+5.7
2,173,407	-		DVU2085	0.23	+2.9