Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1817
Experiment: Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM) |
|---|---|---|---|---|---|
| remove | |||||
| 1,880,846 | + | DVU1816 | 0.39 | -0.3 | |
| 1,880,854 | - | DVU1816 | 0.40 | +0.2 | |
| 1,880,887 | + | DVU1816 | 0.45 | -0.4 | |
| 1,880,900 | - | DVU1816 | 0.46 | -0.2 | |
| 1,881,029 | - | DVU1816 | 0.63 | +0.1 | |
| 1,881,039 | - | DVU1816 | 0.65 | -0.7 | |
| 1,881,076 | - | DVU1816 | 0.70 | -0.4 | |
| 1,881,331 | - | -0.3 | |||
| 1,881,407 | - | +0.4 | |||
| 1,881,479 | + | -0.1 | |||
| 1,881,640 | - | -2.0 | |||
| 1,881,823 | + | cyf | DVU1817 | 0.24 | -0.1 |
| 1,881,909 | + | cyf | DVU1817 | 0.52 | -1.1 |
| 1,881,943 | - | cyf | DVU1817 | 0.63 | -0.4 |
| 1,882,009 | - | cyf | DVU1817 | 0.84 | -2.2 |
| 1,882,101 | - | -0.1 | |||
| 1,882,125 | - | -0.3 |
Or see this region's nucleotide sequence