Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1620
Experiment: Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Hydrogen/Acetate-Thiosulfate (90%atm/5mM-20mM) |
|---|---|---|---|---|---|
| remove | |||||
| 1,704,914 | + | DVU1620 | 0.51 | -0.8 | |
| 1,704,937 | + | DVU1620 | 0.60 | -0.7 | |
| 1,705,077 | + | -0.9 | |||
| 1,705,193 | - | DVU1621 | 0.14 | +0.2 | |
| 1,705,337 | + | DVU1621 | 0.48 | +1.0 | |
| 1,705,566 | + | +2.3 | |||
| 1,705,592 | + | -0.1 | |||
| 1,705,713 | + | -0.2 | |||
| 1,705,720 | + | +1.6 | |||
| 1,705,720 | + | -0.1 | |||
| 1,705,745 | - | +0.5 | |||
| 1,705,762 | - | DORF12360 | 0.12 | +0.1 | |
| 1,705,824 | + | DORF12360 | 0.26 | +0.1 | |
| 1,705,910 | - | DORF12360 | 0.44 | -1.1 | |
| 1,705,944 | + | DORF12360 | 0.51 | -2.1 |
Or see this region's nucleotide sequence