Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29960

Experiment: D-Glucose (C) 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 3 mM
6,663,187	+		PFLU_RS29950	0.64	+0.6
6,663,187	+		PFLU_RS29950	0.64	-2.0
6,663,188	-		PFLU_RS29950	0.64	+0.2
6,663,337	+		PFLU_RS29950	0.77	-2.1
6,663,338	-		PFLU_RS29950	0.77	-0.0
6,663,550	+				+0.9
6,663,550	+				+1.9
6,663,550	+				-1.1
6,663,550	+				+1.4
6,663,550	+				+0.2
6,663,550	+				+1.5
6,663,550	+				-0.0
6,663,550	+				+0.3
6,663,550	+				+0.4
6,663,550	+				+0.5
6,663,551	-				-0.7
6,663,551	-				-0.5
6,663,551	-				+0.2
6,663,551	-				+0.4
6,663,551	-				+2.2
6,663,551	-				-0.7
6,663,551	-				-2.3
6,663,551	-				+0.2
6,663,551	-				-0.4
6,663,551	-				-0.7
6,663,551	-				+0.7
6,663,551	-				-0.5
6,663,551	-				+0.6
6,663,600	-				-0.3
6,663,625	+				+0.1
6,663,625	+				+1.9
6,663,625	+				-0.4
6,663,625	+				+2.5
6,663,625	+				-0.9
6,663,625	+				-0.1
6,663,626	-				-0.6
6,663,626	-				+0.4
6,663,626	-				+0.4
6,663,626	-				-2.1
6,663,626	-				-0.7
6,663,626	-				-0.1
6,663,662	+				+1.4
6,663,663	-				-0.8
6,663,723	+		PFLU_RS29955	0.19	+0.4
6,663,723	+		PFLU_RS29955	0.19	-0.1
6,663,723	+		PFLU_RS29955	0.19	+0.4
6,663,723	+		PFLU_RS29955	0.19	+0.2
6,663,724	-		PFLU_RS29955	0.19	+0.2
6,663,724	-		PFLU_RS29955	0.19	-1.0
6,663,775	+		PFLU_RS29955	0.31	+1.4
6,663,776	-		PFLU_RS29955	0.32	-0.8
6,663,776	-		PFLU_RS29955	0.32	-0.4
6,663,776	-		PFLU_RS29955	0.32	-0.4
6,663,793	-		PFLU_RS29955	0.36	-1.4
6,664,012	+				+0.6
6,664,012	+				-1.2
6,664,012	+				+0.3
6,664,012	+				+0.4
6,664,012	+				+0.3
6,664,013	-				-0.3
6,664,013	-				+0.1
6,664,013	-				-0.9
6,664,013	-				-1.2
6,664,013	-				-0.8
6,664,013	-				-0.5
6,664,013	-				-2.1
6,664,156	+				-1.8
6,664,156	+				-0.1
6,664,156	+				+2.9
6,664,156	+				+2.9
6,664,156	+				-1.5
6,664,157	-				-0.5
6,664,157	-				+0.4
6,664,157	-				-0.9
6,664,157	-				+0.2
6,664,157	-				+0.5
6,664,186	+				-1.4
6,664,186	+				+0.1
6,664,186	+				-1.0
6,664,187	-				-1.2
6,664,205	+				-0.3
6,664,309	+		PFLU_RS29960	0.35	+0.4
6,664,309	+		PFLU_RS29960	0.35	+2.9
6,664,309	+		PFLU_RS29960	0.35	-0.6
6,664,310	-		PFLU_RS29960	0.35	-0.2
6,664,310	-		PFLU_RS29960	0.35	-0.3
6,664,310	-		PFLU_RS29960	0.35	-1.8
6,664,339	+		PFLU_RS29960	0.43	+0.8
6,664,339	+		PFLU_RS29960	0.43	-0.0
6,664,339	+		PFLU_RS29960	0.43	-0.1
6,664,339	+		PFLU_RS29960	0.43	+0.1
6,664,339	+		PFLU_RS29960	0.43	-2.2
6,664,340	-		PFLU_RS29960	0.43	-0.4
6,664,340	-		PFLU_RS29960	0.43	+0.4
6,664,340	-		PFLU_RS29960	0.43	+1.1
6,664,340	-		PFLU_RS29960	0.43	-0.2
6,664,340	-		PFLU_RS29960	0.43	+0.8
6,664,340	-		PFLU_RS29960	0.43	-0.5
6,664,351	+		PFLU_RS29960	0.46	+1.2
6,664,351	+		PFLU_RS29960	0.46	-0.6
6,664,351	+		PFLU_RS29960	0.46	-1.6
6,664,352	-		PFLU_RS29960	0.47	-2.0
6,664,352	-		PFLU_RS29960	0.47	-1.0
6,664,352	-		PFLU_RS29960	0.47	-0.1
6,664,352	-		PFLU_RS29960	0.47	-1.0
6,664,358	+		PFLU_RS29960	0.48	-0.5
6,664,358	+		PFLU_RS29960	0.48	-2.4
6,664,359	-		PFLU_RS29960	0.49	-1.2
6,664,455	+		PFLU_RS29960	0.75	-1.5
6,664,455	+		PFLU_RS29960	0.75	+0.7
6,664,455	+		PFLU_RS29960	0.75	+0.0
6,664,455	+		PFLU_RS29960	0.75	+2.4
6,664,455	+		PFLU_RS29960	0.75	-3.1
6,664,455	+		PFLU_RS29960	0.75	-0.2
6,664,455	+		PFLU_RS29960	0.75	-1.1
6,664,455	+		PFLU_RS29960	0.75	-0.3
6,664,455	+		PFLU_RS29960	0.75	-0.9
6,664,455	+		PFLU_RS29960	0.75	+1.9
6,664,456	-		PFLU_RS29960	0.75	-2.4
6,664,456	-		PFLU_RS29960	0.75	+0.9
6,664,456	-		PFLU_RS29960	0.75	+0.8
6,664,456	-		PFLU_RS29960	0.75	-0.1
6,664,456	-		PFLU_RS29960	0.75	-0.6
6,664,546	+				-2.1
6,664,546	+				-0.1
6,664,546	+				-0.9
6,664,585	+				-0.6
6,664,585	+				-1.3
6,664,585	+				-0.3
6,664,585	+				+0.6
6,664,585	+				-0.5
6,664,585	+				-1.1
6,664,585	+				-0.9
6,664,585	+				+0.7
6,664,585	+				+0.2
6,664,585	+				+0.1
6,664,585	+				-0.7
6,664,585	+				-0.7
6,664,585	+				+0.8
6,664,585	+				+0.1
6,664,585	+				+0.6
6,664,585	+				-0.1
6,664,585	+				+0.6
6,664,585	+				-1.6
6,664,585	+				+1.0
6,664,585	+				+0.7
6,664,585	+				-0.6
6,664,585	+				-0.1
6,664,585	+				-2.9
6,664,585	+				-0.9
6,664,585	+				-1.1
6,664,585	+				+0.4
6,664,586	-				-1.4
6,664,586	-				-0.7
6,664,586	-				-0.3
6,664,586	-				-0.6
6,664,586	-				-0.9
6,664,586	-				+1.9
6,664,586	-				+0.7
6,664,586	-				-0.1
6,664,586	-				+0.1
6,664,586	-				+0.4
6,664,586	-				-1.1
6,664,586	-				+1.8
6,664,586	-				+0.5
6,664,586	-				-0.6
6,664,586	-				-0.5
6,664,586	-				-0.4
6,664,586	-				+0.5
6,664,586	-				-0.9
6,664,586	-				+0.3
6,664,586	-				-1.5
6,664,586	-				-0.1
6,664,586	-				+0.6
6,664,586	-				+2.6
6,664,586	-				-0.9
6,664,586	-				+1.9
6,664,586	-				+0.9
6,664,586	-				-0.1
6,664,616	-				-0.1
6,664,616	-				-0.8
6,664,703	+		PFLU_RS29965	0.13	-1.4
6,664,703	+		PFLU_RS29965	0.13	+0.4
6,664,703	+		PFLU_RS29965	0.13	+0.1
6,664,865	+		PFLU_RS29965	0.27	-0.7
6,664,865	+		PFLU_RS29965	0.27	+0.4
6,664,866	-		PFLU_RS29965	0.27	-0.1
6,665,005	+		PFLU_RS29965	0.38	-0.6
6,665,005	+		PFLU_RS29965	0.38	+1.8
6,665,005	+		PFLU_RS29965	0.38	-1.6
6,665,005	+		PFLU_RS29965	0.38	-0.1
6,665,005	+		PFLU_RS29965	0.38	-1.3
6,665,005	+		PFLU_RS29965	0.38	+1.9
6,665,005	+		PFLU_RS29965	0.38	+0.7
6,665,005	+		PFLU_RS29965	0.38	-0.1
6,665,005	+		PFLU_RS29965	0.38	+0.4
6,665,005	+		PFLU_RS29965	0.38	+0.3
6,665,005	+		PFLU_RS29965	0.38	-0.1
6,665,005	+		PFLU_RS29965	0.38	-1.2
6,665,005	+		PFLU_RS29965	0.38	+2.4
6,665,006	-		PFLU_RS29965	0.38	+0.9
6,665,006	-		PFLU_RS29965	0.38	-1.1
6,665,006	-		PFLU_RS29965	0.38	+1.9
6,665,006	-		PFLU_RS29965	0.38	-1.2
6,665,006	-		PFLU_RS29965	0.38	-0.8
6,665,006	-		PFLU_RS29965	0.38	-0.2
6,665,006	-		PFLU_RS29965	0.38	+0.9
6,665,006	-		PFLU_RS29965	0.38	-1.4
6,665,006	-		PFLU_RS29965	0.38	+1.4
6,665,006	-		PFLU_RS29965	0.38	-1.3
6,665,060	+		PFLU_RS29965	0.43	-0.1
6,665,061	-		PFLU_RS29965	0.43	-0.6
6,665,061	-		PFLU_RS29965	0.43	-0.2
6,665,061	-		PFLU_RS29965	0.43	-0.1
6,665,061	-		PFLU_RS29965	0.43	-1.0
6,665,331	+		PFLU_RS29965	0.65	+0.7
6,665,332	-		PFLU_RS29965	0.65	-1.4
6,665,332	-		PFLU_RS29965	0.65	-0.8