Experiment: D-Glucose (C) 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS19635 and PFLU_RS19640 are separated by 94 nucleotides PFLU_RS19640 and PFLU_RS19645 overlap by 4 nucleotides PFLU_RS19645 and PFLU_RS19650 overlap by 4 nucleotides PFLU_RS19650 and PFLU_RS19655 overlap by 4 nucleotides
PFLU_RS19635: PFLU_RS19635 - SDR family oxidoreductase, at 4,445,510 to 4,446,262
_RS19635
PFLU_RS19640: PFLU_RS19640 - 5-oxoprolinase subunit PxpA, at 4,446,357 to 4,447,130
_RS19640
PFLU_RS19645: PFLU_RS19645 - hypothetical protein, at 4,447,127 to 4,447,519
_RS19645
PFLU_RS19650: PFLU_RS19650 - biotin-dependent carboxyltransferase family protein, at 4,447,516 to 4,448,490
_RS19650
PFLU_RS19655: PFLU_RS19655 - 5-oxoprolinase subunit PxpB, at 4,448,487 to 4,449,143
_RS19655
Position (kb)
4447
4448 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4446.185 kb on + strand, within PFLU_RS19635 at 4446.185 kb on + strand, within PFLU_RS19635 at 4446.185 kb on + strand, within PFLU_RS19635 at 4446.300 kb on + strand at 4446.358 kb on + strand at 4446.359 kb on - strand at 4446.389 kb on + strand at 4446.389 kb on + strand at 4446.389 kb on + strand at 4446.389 kb on + strand at 4446.389 kb on + strand at 4446.389 kb on + strand at 4446.389 kb on + strand at 4446.390 kb on - strand at 4446.390 kb on - strand at 4446.865 kb on + strand, within PFLU_RS19640 at 4446.865 kb on + strand, within PFLU_RS19640 at 4446.865 kb on + strand, within PFLU_RS19640 at 4446.866 kb on - strand, within PFLU_RS19640 at 4446.866 kb on - strand, within PFLU_RS19640 at 4446.866 kb on - strand, within PFLU_RS19640 at 4446.874 kb on + strand, within PFLU_RS19640 at 4446.874 kb on + strand, within PFLU_RS19640 at 4446.874 kb on + strand, within PFLU_RS19640 at 4446.874 kb on + strand, within PFLU_RS19640 at 4446.874 kb on + strand, within PFLU_RS19640 at 4446.875 kb on - strand, within PFLU_RS19640 at 4447.130 kb on + strand at 4447.193 kb on + strand, within PFLU_RS19645 at 4447.193 kb on + strand, within PFLU_RS19645 at 4447.193 kb on + strand, within PFLU_RS19645 at 4447.193 kb on + strand, within PFLU_RS19645 at 4447.193 kb on + strand, within PFLU_RS19645 at 4447.193 kb on + strand, within PFLU_RS19645 at 4447.193 kb on + strand, within PFLU_RS19645 at 4447.193 kb on + strand, within PFLU_RS19645 at 4447.193 kb on + strand, within PFLU_RS19645 at 4447.193 kb on + strand, within PFLU_RS19645 at 4447.193 kb on + strand, within PFLU_RS19645 at 4447.193 kb on + strand, within PFLU_RS19645 at 4447.193 kb on + strand, within PFLU_RS19645 at 4447.193 kb on + strand, within PFLU_RS19645 at 4447.194 kb on - strand, within PFLU_RS19645 at 4447.194 kb on - strand, within PFLU_RS19645 at 4447.194 kb on - strand, within PFLU_RS19645 at 4447.194 kb on - strand, within PFLU_RS19645 at 4447.525 kb on + strand at 4447.526 kb on - strand at 4447.526 kb on - strand at 4447.572 kb on - strand at 4447.610 kb on + strand at 4447.610 kb on + strand at 4447.610 kb on + strand at 4447.610 kb on + strand at 4447.919 kb on + strand, within PFLU_RS19650 at 4447.919 kb on + strand, within PFLU_RS19650 at 4447.919 kb on + strand, within PFLU_RS19650 at 4447.920 kb on - strand, within PFLU_RS19650 at 4448.152 kb on + strand, within PFLU_RS19650 at 4448.152 kb on + strand, within PFLU_RS19650 at 4448.152 kb on + strand, within PFLU_RS19650 at 4448.152 kb on + strand, within PFLU_RS19650 at 4448.152 kb on + strand, within PFLU_RS19650 at 4448.152 kb on + strand, within PFLU_RS19650 at 4448.152 kb on + strand, within PFLU_RS19650 at 4448.152 kb on + strand, within PFLU_RS19650 at 4448.152 kb on + strand, within PFLU_RS19650 at 4448.152 kb on + strand, within PFLU_RS19650 at 4448.153 kb on - strand, within PFLU_RS19650 at 4448.153 kb on - strand, within PFLU_RS19650 at 4448.153 kb on - strand, within PFLU_RS19650 at 4448.153 kb on - strand, within PFLU_RS19650 at 4448.153 kb on - strand, within PFLU_RS19650 at 4448.156 kb on + strand, within PFLU_RS19650 at 4448.156 kb on + strand, within PFLU_RS19650 at 4448.156 kb on + strand, within PFLU_RS19650 at 4448.157 kb on - strand, within PFLU_RS19650 at 4448.157 kb on - strand, within PFLU_RS19650 at 4448.157 kb on - strand, within PFLU_RS19650 at 4448.216 kb on + strand, within PFLU_RS19650 at 4448.217 kb on - strand, within PFLU_RS19650 at 4448.217 kb on - strand, within PFLU_RS19650 at 4448.217 kb on - strand, within PFLU_RS19650 at 4448.305 kb on + strand, within PFLU_RS19650 at 4448.305 kb on + strand, within PFLU_RS19650 at 4448.305 kb on + strand, within PFLU_RS19650 at 4448.305 kb on + strand, within PFLU_RS19650 at 4448.305 kb on + strand, within PFLU_RS19650 at 4448.306 kb on - strand, within PFLU_RS19650 at 4448.306 kb on - strand, within PFLU_RS19650 at 4448.306 kb on - strand, within PFLU_RS19650 at 4448.306 kb on - strand, within PFLU_RS19650 at 4448.326 kb on + strand, within PFLU_RS19650 at 4448.327 kb on - strand, within PFLU_RS19650 at 4448.327 kb on - strand, within PFLU_RS19650
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) 3 mM remove 4,446,185 + PFLU_RS19635 0.90 +1.0 4,446,185 + PFLU_RS19635 0.90 -0.6 4,446,185 + PFLU_RS19635 0.90 -1.0 4,446,300 + -0.2 4,446,358 + +0.0 4,446,359 - +0.1 4,446,389 + +0.1 4,446,389 + -1.1 4,446,389 + -0.3 4,446,389 + -0.9 4,446,389 + +0.8 4,446,389 + +0.6 4,446,389 + +1.0 4,446,390 - -0.2 4,446,390 - -0.8 4,446,865 + PFLU_RS19640 0.66 -0.0 4,446,865 + PFLU_RS19640 0.66 +0.3 4,446,865 + PFLU_RS19640 0.66 -0.2 4,446,866 - PFLU_RS19640 0.66 +1.0 4,446,866 - PFLU_RS19640 0.66 -0.0 4,446,866 - PFLU_RS19640 0.66 -1.2 4,446,874 + PFLU_RS19640 0.67 -0.5 4,446,874 + PFLU_RS19640 0.67 +1.1 4,446,874 + PFLU_RS19640 0.67 +1.1 4,446,874 + PFLU_RS19640 0.67 -0.3 4,446,874 + PFLU_RS19640 0.67 -3.1 4,446,875 - PFLU_RS19640 0.67 +0.3 4,447,130 + +0.8 4,447,193 + PFLU_RS19645 0.17 -0.4 4,447,193 + PFLU_RS19645 0.17 -0.1 4,447,193 + PFLU_RS19645 0.17 +0.2 4,447,193 + PFLU_RS19645 0.17 -0.3 4,447,193 + PFLU_RS19645 0.17 -0.2 4,447,193 + PFLU_RS19645 0.17 -0.1 4,447,193 + PFLU_RS19645 0.17 +2.6 4,447,193 + PFLU_RS19645 0.17 -0.7 4,447,193 + PFLU_RS19645 0.17 +0.2 4,447,193 + PFLU_RS19645 0.17 -0.5 4,447,193 + PFLU_RS19645 0.17 -0.6 4,447,193 + PFLU_RS19645 0.17 -1.2 4,447,193 + PFLU_RS19645 0.17 +0.5 4,447,193 + PFLU_RS19645 0.17 +1.6 4,447,194 - PFLU_RS19645 0.17 -2.8 4,447,194 - PFLU_RS19645 0.17 -0.3 4,447,194 - PFLU_RS19645 0.17 +0.5 4,447,194 - PFLU_RS19645 0.17 -0.0 4,447,525 + +1.5 4,447,526 - -0.1 4,447,526 - +0.8 4,447,572 - +0.6 4,447,610 + +1.3 4,447,610 + +0.7 4,447,610 + +1.6 4,447,610 + -0.6 4,447,919 + PFLU_RS19650 0.41 -0.4 4,447,919 + PFLU_RS19650 0.41 +0.7 4,447,919 + PFLU_RS19650 0.41 -0.2 4,447,920 - PFLU_RS19650 0.41 +0.4 4,448,152 + PFLU_RS19650 0.65 +0.4 4,448,152 + PFLU_RS19650 0.65 +0.4 4,448,152 + PFLU_RS19650 0.65 +3.2 4,448,152 + PFLU_RS19650 0.65 -0.3 4,448,152 + PFLU_RS19650 0.65 +0.0 4,448,152 + PFLU_RS19650 0.65 +1.3 4,448,152 + PFLU_RS19650 0.65 +0.2 4,448,152 + PFLU_RS19650 0.65 -1.1 4,448,152 + PFLU_RS19650 0.65 +3.0 4,448,152 + PFLU_RS19650 0.65 +0.6 4,448,153 - PFLU_RS19650 0.65 +0.8 4,448,153 - PFLU_RS19650 0.65 -0.3 4,448,153 - PFLU_RS19650 0.65 -1.6 4,448,153 - PFLU_RS19650 0.65 -0.6 4,448,153 - PFLU_RS19650 0.65 -0.4 4,448,156 + PFLU_RS19650 0.66 +0.2 4,448,156 + PFLU_RS19650 0.66 +0.8 4,448,156 + PFLU_RS19650 0.66 +0.8 4,448,157 - PFLU_RS19650 0.66 -1.5 4,448,157 - PFLU_RS19650 0.66 +0.7 4,448,157 - PFLU_RS19650 0.66 -0.7 4,448,216 + PFLU_RS19650 0.72 +1.2 4,448,217 - PFLU_RS19650 0.72 -0.9 4,448,217 - PFLU_RS19650 0.72 -1.1 4,448,217 - PFLU_RS19650 0.72 +1.6 4,448,305 + PFLU_RS19650 0.81 +0.2 4,448,305 + PFLU_RS19650 0.81 -0.7 4,448,305 + PFLU_RS19650 0.81 -0.2 4,448,305 + PFLU_RS19650 0.81 -0.6 4,448,305 + PFLU_RS19650 0.81 -0.0 4,448,306 - PFLU_RS19650 0.81 -0.2 4,448,306 - PFLU_RS19650 0.81 -1.0 4,448,306 - PFLU_RS19650 0.81 -0.4 4,448,306 - PFLU_RS19650 0.81 -1.1 4,448,326 + PFLU_RS19650 0.83 +0.5 4,448,327 - PFLU_RS19650 0.83 +0.2 4,448,327 - PFLU_RS19650 0.83 -0.0
Or see this region's nucleotide sequence