Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS15225

Experiment: D-Glucose (C) 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 3 mM
3,411,113	+		PFLU_RS15215	0.80	-1.5
3,411,114	-		PFLU_RS15215	0.80	-1.1
3,411,138	+		PFLU_RS15215	0.84	+0.8
3,411,138	+		PFLU_RS15215	0.84	-1.1
3,411,139	-		PFLU_RS15215	0.84	-0.4
3,411,139	-		PFLU_RS15215	0.84	+0.2
3,411,139	-		PFLU_RS15215	0.84	-0.8
3,411,195	+				-2.8
3,411,255	+				+0.4
3,411,255	+				-0.5
3,411,256	-				+0.7
3,411,256	-				-0.6
3,411,298	+				-1.3
3,411,298	+				+0.4
3,411,299	-				+0.9
3,411,319	-				-0.4
3,411,363	+				-0.9
3,411,379	+				-0.6
3,411,379	+				+0.8
3,411,379	+				+0.2
3,411,380	-				-0.7
3,411,380	-				+0.6
3,411,444	-				-0.7
3,411,594	-		PFLU_RS15220	0.26	-1.8
3,411,641	+		PFLU_RS15220	0.33	+0.6
3,411,642	-		PFLU_RS15220	0.33	-0.1
3,411,680	-		PFLU_RS15220	0.39	+0.4
3,411,810	+		PFLU_RS15220	0.58	-1.7
3,411,964	+		PFLU_RS15220	0.81	+0.5
3,411,965	-		PFLU_RS15220	0.81	-0.5
3,411,965	-		PFLU_RS15220	0.81	-1.2
3,411,965	-		PFLU_RS15220	0.81	-0.6
3,411,965	-		PFLU_RS15220	0.81	-0.0
3,411,965	-		PFLU_RS15220	0.81	+1.5
3,411,965	-		PFLU_RS15220	0.81	-1.8
3,411,965	-		PFLU_RS15220	0.81	+0.6
3,411,965	-		PFLU_RS15220	0.81	-0.5
3,411,965	-		PFLU_RS15220	0.81	-0.7
3,411,967	+		PFLU_RS15220	0.81	+0.8
3,411,968	-		PFLU_RS15220	0.82	+1.4
3,411,968	-		PFLU_RS15220	0.82	-0.0
3,412,059	+				-0.6
3,412,060	-				+1.0
3,412,113	+				+0.5
3,412,181	+				+0.4
3,412,181	+				-1.0
3,412,181	+				+0.2
3,412,181	+				-0.6
3,412,181	+				-0.3
3,412,181	+				+0.0
3,412,182	-				+1.1
3,412,182	-				-0.7
3,412,209	-				+0.6
3,412,315	-		PFLU_RS15225	0.16	+1.0
3,412,406	+		PFLU_RS15225	0.22	+0.4
3,412,407	-		PFLU_RS15225	0.22	-0.8
3,412,407	-		PFLU_RS15225	0.22	-0.5
3,412,685	+		PFLU_RS15225	0.41	+2.4
3,412,686	-		PFLU_RS15225	0.41	-1.0
3,412,708	-		PFLU_RS15225	0.42	-2.5
3,412,986	+		PFLU_RS15225	0.61	-0.0
3,412,987	-		PFLU_RS15225	0.61	-0.4
3,413,106	-		PFLU_RS15225	0.69	+0.8
3,413,222	+		PFLU_RS15225	0.77	-0.7
3,413,222	+		PFLU_RS15225	0.77	+1.4
3,413,408	+		PFLU_RS15225	0.90	+0.1
3,413,408	+		PFLU_RS15225	0.90	-0.5
3,413,418	+				+0.7
3,413,418	+				+1.4
3,413,418	+				-0.7
3,413,418	+				-0.0
3,413,419	-				-1.0
3,413,419	-				+1.4
3,413,419	-				+0.4
3,413,501	-				-1.3
3,413,501	-				+0.8
3,413,665	+		PFLU_RS15230	0.16	+0.6
3,413,689	+		PFLU_RS15230	0.20	+0.4
3,413,689	+		PFLU_RS15230	0.20	+0.5
3,413,689	+		PFLU_RS15230	0.20	+0.7
3,413,689	+		PFLU_RS15230	0.20	-0.0
3,413,689	+		PFLU_RS15230	0.20	+1.0
3,413,689	+		PFLU_RS15230	0.20	+0.6
3,413,690	-		PFLU_RS15230	0.20	+0.7
3,413,690	-		PFLU_RS15230	0.20	+2.4
3,413,690	-		PFLU_RS15230	0.20	+0.4
3,413,692	+		PFLU_RS15230	0.20	+0.5
3,413,692	+		PFLU_RS15230	0.20	-0.5
3,413,692	+		PFLU_RS15230	0.20	+0.3
3,413,693	-		PFLU_RS15230	0.20	+0.9
3,413,693	-		PFLU_RS15230	0.20	+0.2
3,413,706	+		PFLU_RS15230	0.22	-0.2
3,413,706	+		PFLU_RS15230	0.22	+0.8
3,413,706	+		PFLU_RS15230	0.22	-1.4
3,413,782	+		PFLU_RS15230	0.33	+0.3
3,413,782	+		PFLU_RS15230	0.33	+0.2
3,413,783	-		PFLU_RS15230	0.33	-0.0
3,413,797	+		PFLU_RS15230	0.36	-0.9
3,413,798	-		PFLU_RS15230	0.36	-0.0
3,413,902	+		PFLU_RS15230	0.51	+0.4
3,413,902	+		PFLU_RS15230	0.51	+0.2
3,413,902	+		PFLU_RS15230	0.51	-0.2
3,413,902	+		PFLU_RS15230	0.51	+0.1
3,413,903	-		PFLU_RS15230	0.51	+2.2
3,413,903	-		PFLU_RS15230	0.51	-0.3
3,413,908	+		PFLU_RS15230	0.52	+1.8
3,413,908	+		PFLU_RS15230	0.52	+1.1
3,413,909	-		PFLU_RS15230	0.52	-0.9
3,413,909	-		PFLU_RS15230	0.52	+1.0
3,413,909	-		PFLU_RS15230	0.52	-0.2
3,414,047	-		PFLU_RS15230	0.73	+0.9
3,414,047	-		PFLU_RS15230	0.73	+0.3
3,414,047	-		PFLU_RS15230	0.73	+0.1
3,414,163	+		PFLU_RS15230	0.90	-0.9
3,414,163	+		PFLU_RS15230	0.90	-1.4
3,414,172	+				-0.4
3,414,172	+				-1.4
3,414,173	-				+0.8