Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08515

Experiment: 4-Hydroxyphenylpropionic (C) 1.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxyphenylpropionic (C) 1.5 mM
1,897,912	+		PFLU_RS08510	0.35	-1.5
1,897,912	+		PFLU_RS08510	0.35	-0.6
1,897,912	+		PFLU_RS08510	0.35	-3.1
1,897,912	+		PFLU_RS08510	0.35	+1.1
1,897,912	+		PFLU_RS08510	0.35	-0.8
1,897,913	-		PFLU_RS08510	0.35	+0.5
1,897,913	-		PFLU_RS08510	0.35	-0.0
1,897,913	-		PFLU_RS08510	0.35	+0.2
1,897,913	-		PFLU_RS08510	0.35	-0.5
1,897,913	-		PFLU_RS08510	0.35	+0.7
1,897,913	-		PFLU_RS08510	0.35	-0.5
1,897,913	-		PFLU_RS08510	0.35	+1.1
1,898,042	+		PFLU_RS08510	0.46	-1.8
1,898,042	+		PFLU_RS08510	0.46	+0.3
1,898,042	+		PFLU_RS08510	0.46	-1.5
1,898,042	+		PFLU_RS08510	0.46	+0.3
1,898,042	+		PFLU_RS08510	0.46	-0.2
1,898,042	+		PFLU_RS08510	0.46	+0.1
1,898,042	+		PFLU_RS08510	0.46	-0.0
1,898,042	+		PFLU_RS08510	0.46	+0.3
1,898,042	+		PFLU_RS08510	0.46	+0.8
1,898,042	+		PFLU_RS08510	0.46	+0.0
1,898,042	+		PFLU_RS08510	0.46	-0.3
1,898,042	+		PFLU_RS08510	0.46	+1.4
1,898,042	+		PFLU_RS08510	0.46	-1.1
1,898,042	+		PFLU_RS08510	0.46	+0.9
1,898,042	+		PFLU_RS08510	0.46	+1.1
1,898,043	-		PFLU_RS08510	0.46	+1.9
1,898,043	-		PFLU_RS08510	0.46	-0.8
1,898,043	-		PFLU_RS08510	0.46	-2.8
1,898,043	-		PFLU_RS08510	0.46	-0.3
1,898,043	-		PFLU_RS08510	0.46	+0.6
1,898,043	-		PFLU_RS08510	0.46	+0.4
1,898,043	-		PFLU_RS08510	0.46	+0.3
1,898,043	-		PFLU_RS08510	0.46	-1.3
1,898,043	-		PFLU_RS08510	0.46	+1.9
1,898,043	-		PFLU_RS08510	0.46	-0.7
1,898,043	-		PFLU_RS08510	0.46	+0.5
1,898,043	-		PFLU_RS08510	0.46	+0.3
1,898,043	-		PFLU_RS08510	0.46	-1.5
1,898,043	-		PFLU_RS08510	0.46	+0.1
1,898,060	-		PFLU_RS08510	0.47	-0.4
1,898,060	-		PFLU_RS08510	0.47	-0.6
1,898,074	+		PFLU_RS08510	0.48	+0.4
1,898,074	+		PFLU_RS08510	0.48	-0.6
1,898,074	+		PFLU_RS08510	0.48	+0.5
1,898,074	+		PFLU_RS08510	0.48	+0.6
1,898,074	+		PFLU_RS08510	0.48	+0.3
1,898,075	-		PFLU_RS08510	0.48	+0.2
1,898,075	-		PFLU_RS08510	0.48	-2.4
1,898,075	-		PFLU_RS08510	0.48	+0.3
1,898,075	-		PFLU_RS08510	0.48	-2.7
1,898,075	-		PFLU_RS08510	0.48	+0.1
1,898,075	-		PFLU_RS08510	0.48	-0.7
1,898,075	-		PFLU_RS08510	0.48	+0.5
1,898,075	-		PFLU_RS08510	0.48	+0.4
1,898,075	-		PFLU_RS08510	0.48	+0.4
1,898,075	-		PFLU_RS08510	0.48	-0.8
1,898,149	+		PFLU_RS08510	0.55	-1.2
1,898,149	+		PFLU_RS08510	0.55	+0.3
1,898,150	-		PFLU_RS08510	0.55	+0.8
1,898,150	-		PFLU_RS08510	0.55	-0.0
1,898,150	-		PFLU_RS08510	0.55	-0.3
1,898,198	+		PFLU_RS08510	0.59	-0.5
1,898,199	-		PFLU_RS08510	0.59	+1.3
1,898,266	+		PFLU_RS08510	0.64	+1.9
1,898,266	+		PFLU_RS08510	0.64	+0.5
1,898,266	+		PFLU_RS08510	0.64	-0.8
1,898,266	+		PFLU_RS08510	0.64	-0.1
1,898,266	+		PFLU_RS08510	0.64	-0.1
1,898,266	+		PFLU_RS08510	0.64	-0.8
1,898,266	+		PFLU_RS08510	0.64	-0.4
1,898,266	+		PFLU_RS08510	0.64	-0.7
1,898,266	+		PFLU_RS08510	0.64	-1.3
1,898,267	-		PFLU_RS08510	0.64	+0.0
1,898,267	-		PFLU_RS08510	0.64	-0.3
1,898,267	-		PFLU_RS08510	0.64	+1.0
1,898,267	-		PFLU_RS08510	0.64	-0.6
1,898,267	-		PFLU_RS08510	0.64	-0.7
1,898,267	-		PFLU_RS08510	0.64	+0.9
1,898,267	-		PFLU_RS08510	0.64	-0.0
1,898,318	-		PFLU_RS08510	0.68	-0.7
1,898,318	-		PFLU_RS08510	0.68	+0.0
1,898,407	+		PFLU_RS08510	0.76	-0.6
1,898,407	+		PFLU_RS08510	0.76	+0.3
1,898,407	+		PFLU_RS08510	0.76	-0.4
1,898,407	+		PFLU_RS08510	0.76	-0.5
1,898,407	+		PFLU_RS08510	0.76	-1.5
1,898,407	+		PFLU_RS08510	0.76	-1.1
1,898,407	+		PFLU_RS08510	0.76	+0.6
1,898,407	+		PFLU_RS08510	0.76	-1.2
1,898,408	-		PFLU_RS08510	0.76	+0.9
1,898,408	-		PFLU_RS08510	0.76	-0.1
1,898,408	-		PFLU_RS08510	0.76	+1.3
1,898,408	-		PFLU_RS08510	0.76	+0.3
1,898,408	-		PFLU_RS08510	0.76	+0.3
1,898,408	-		PFLU_RS08510	0.76	-0.0
1,898,408	-		PFLU_RS08510	0.76	+0.8
1,898,408	-		PFLU_RS08510	0.76	-1.7
1,898,408	-		PFLU_RS08510	0.76	+1.4
1,898,408	-		PFLU_RS08510	0.76	-0.4
1,898,408	-		PFLU_RS08510	0.76	+0.3
1,898,408	-		PFLU_RS08510	0.76	-1.5
1,898,449	+		PFLU_RS08510	0.79	-0.6
1,898,449	+		PFLU_RS08510	0.79	-0.6
1,898,449	+		PFLU_RS08510	0.79	+1.2
1,898,449	+		PFLU_RS08510	0.79	+1.4
1,898,450	-		PFLU_RS08510	0.79	-0.9
1,898,450	-		PFLU_RS08510	0.79	+1.4
1,898,452	+		PFLU_RS08510	0.80	-1.6
1,898,452	+		PFLU_RS08510	0.80	-1.6
1,898,452	+		PFLU_RS08510	0.80	-0.1
1,898,452	+		PFLU_RS08510	0.80	+0.7
1,898,452	+		PFLU_RS08510	0.80	+0.4
1,898,452	+		PFLU_RS08510	0.80	-0.2
1,898,452	+		PFLU_RS08510	0.80	+0.5
1,898,452	+		PFLU_RS08510	0.80	-1.7
1,898,452	+		PFLU_RS08510	0.80	-0.8
1,898,452	+		PFLU_RS08510	0.80	-0.0
1,898,452	+		PFLU_RS08510	0.80	+0.2
1,898,453	-		PFLU_RS08510	0.80	+0.9
1,898,453	-		PFLU_RS08510	0.80	-0.8
1,898,453	-		PFLU_RS08510	0.80	-0.2
1,898,453	-		PFLU_RS08510	0.80	-0.1
1,898,453	-		PFLU_RS08510	0.80	+0.3
1,898,453	-		PFLU_RS08510	0.80	-0.0
1,898,453	-		PFLU_RS08510	0.80	-0.9
1,898,500	+		PFLU_RS08510	0.83	+0.9
1,898,500	+		PFLU_RS08510	0.83	-0.8
1,898,500	+		PFLU_RS08510	0.83	-0.5
1,898,501	-		PFLU_RS08510	0.84	-0.9
1,898,501	-		PFLU_RS08510	0.84	-0.0
1,898,659	+				-0.5
1,898,660	-				-1.5
1,898,744	+				+0.3
1,898,745	-				+0.9
1,898,745	-				+0.6
1,898,749	+				+0.9
1,898,749	+				+0.5
1,898,749	+				-2.0
1,898,749	+				+0.3
1,898,749	+				-1.6
1,898,749	+				-0.9
1,898,749	+				-0.1
1,898,749	+				-1.5
1,898,749	+				-0.1
1,898,749	+				-0.8
1,898,749	+				+1.9
1,898,749	+				-0.4
1,898,749	+				-1.7
1,898,750	-				+1.0
1,898,750	-				+0.2
1,898,750	-				+2.3
1,898,750	-				-1.1
1,898,750	-				+0.3
1,898,750	-				+0.9
1,898,750	-				+0.1
1,898,750	-				-0.6
1,898,778	+				-0.4
1,898,778	+				-1.2
1,898,778	+				-1.9
1,898,778	+				-1.8
1,898,778	+				+0.3
1,898,778	+				-0.2
1,898,778	+				-1.7
1,898,779	-				-0.6
1,898,779	-				+0.6
1,898,779	-				+0.3
1,898,779	-				-0.1
1,898,779	-				-1.1
1,898,782	+				+0.6
1,898,782	+				+0.5
1,898,782	+				+0.9
1,898,782	+				+1.4
1,898,782	+				+0.3
1,898,783	-				+0.9
1,898,783	-				-0.8
1,898,783	-				-0.8
1,898,783	-				-0.1
1,898,783	-				+0.3
1,898,783	-				-0.3
1,898,783	-				+0.7
1,898,783	-				-0.5
1,898,783	-				-1.7
1,898,783	-				+0.6
1,898,783	-				+1.1
1,898,839	+				+0.6
1,898,839	+				+0.6
1,898,839	+				+0.4
1,898,839	+				+0.0
1,898,839	+				-0.0
1,898,839	+				-1.2
1,898,839	+				+0.0
1,898,839	+				+0.7
1,898,839	+				-0.6
1,898,839	+				-0.7
1,898,839	+				-0.3
1,898,839	+				-0.3
1,898,840	-				+1.0
1,898,840	-				-3.1
1,898,840	-				+0.3
1,898,840	-				+0.5
1,898,840	-				+0.3
1,898,840	-				-0.7
1,898,840	-				-2.5
1,898,840	-				+0.7
1,898,840	-				-0.3
1,898,840	-				+1.4
1,898,840	-				+0.3
1,898,855	+				-0.6
1,898,855	+				-1.9
1,898,855	+				-1.8
1,898,855	+				-0.1
1,898,855	+				+0.3
1,898,855	+				-0.5
1,898,855	+				+1.3
1,898,856	-				+1.4
1,898,856	-				+1.9
1,898,856	-				+0.9
1,898,856	-				-0.6
1,898,866	+				+0.5
1,898,866	+				-0.5
1,898,866	+				-2.0
1,898,866	+				+0.9
1,898,866	+				-0.5
1,898,867	-				-0.3
1,898,897	+				-0.7
1,898,897	+				+2.3
1,898,898	-				+0.1
1,898,898	-				+0.1
1,898,898	-				+3.4
1,898,959	+		PFLU_RS08515	0.15	-2.0
1,898,959	+		PFLU_RS08515	0.15	-0.2
1,898,959	+		PFLU_RS08515	0.15	-0.1
1,898,959	+		PFLU_RS08515	0.15	-0.9
1,898,959	+		PFLU_RS08515	0.15	-0.9
1,898,959	+		PFLU_RS08515	0.15	-2.5
1,898,959	+		PFLU_RS08515	0.15	-0.5
1,898,959	+		PFLU_RS08515	0.15	-0.6
1,898,959	+		PFLU_RS08515	0.15	-0.1
1,898,960	-		PFLU_RS08515	0.15	-1.4
1,898,960	-		PFLU_RS08515	0.15	+0.3
1,898,960	-		PFLU_RS08515	0.15	-0.1
1,898,960	-		PFLU_RS08515	0.15	+0.3
1,898,960	-		PFLU_RS08515	0.15	+1.2
1,898,960	-		PFLU_RS08515	0.15	-0.7
1,898,960	-		PFLU_RS08515	0.15	-1.5
1,899,007	+		PFLU_RS08515	0.27	-1.2
1,899,007	+		PFLU_RS08515	0.27	+1.6
1,899,007	+		PFLU_RS08515	0.27	+0.3
1,899,007	+		PFLU_RS08515	0.27	-0.7
1,899,007	+		PFLU_RS08515	0.27	+0.0
1,899,007	+		PFLU_RS08515	0.27	+1.9
1,899,007	+		PFLU_RS08515	0.27	-0.0
1,899,007	+		PFLU_RS08515	0.27	-0.9
1,899,007	+		PFLU_RS08515	0.27	+1.9
1,899,007	+		PFLU_RS08515	0.27	+0.8
1,899,007	+		PFLU_RS08515	0.27	-0.8
1,899,007	+		PFLU_RS08515	0.27	+0.9
1,899,007	+		PFLU_RS08515	0.27	-0.3
1,899,007	+		PFLU_RS08515	0.27	-0.1
1,899,008	-		PFLU_RS08515	0.27	-0.3
1,899,008	-		PFLU_RS08515	0.27	+2.3
1,899,008	-		PFLU_RS08515	0.27	-0.0
1,899,008	-		PFLU_RS08515	0.27	-0.9
1,899,008	-		PFLU_RS08515	0.27	+0.6
1,899,008	-		PFLU_RS08515	0.27	-0.9
1,899,008	-		PFLU_RS08515	0.27	+1.9
1,899,008	-		PFLU_RS08515	0.27	+1.9
1,899,034	+		PFLU_RS08515	0.34	-1.9
1,899,034	+		PFLU_RS08515	0.34	+1.1
1,899,034	+		PFLU_RS08515	0.34	-1.1
1,899,035	-		PFLU_RS08515	0.34	-2.2
1,899,035	-		PFLU_RS08515	0.34	-0.7
1,899,035	-		PFLU_RS08515	0.34	-1.4
1,899,035	-		PFLU_RS08515	0.34	-1.0
1,899,112	+		PFLU_RS08515	0.53	+0.7
1,899,113	-		PFLU_RS08515	0.54	-1.4
1,899,113	-		PFLU_RS08515	0.54	+0.6
1,899,113	-		PFLU_RS08515	0.54	-1.7
1,899,306	+				-0.9
1,899,306	+				+0.2
1,899,306	+				-2.1
1,899,307	-				-1.1
1,899,307	-				+3.4
1,899,307	-				-0.6
1,899,307	-				-1.1
1,899,307	-				+0.1
1,899,359	-				+0.5
1,899,359	-				-0.9