Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08265

Experiment: 4-Hydroxyphenylpropionic (C) 1.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxyphenylpropionic (C) 1.5 mM
1,847,733	+		PFLU_RS08255	0.89	-1.6
1,847,733	+		PFLU_RS08255	0.89	-0.9
1,847,733	+		PFLU_RS08255	0.89	-2.0
1,847,733	+		PFLU_RS08255	0.89	-1.9
1,847,733	+		PFLU_RS08255	0.89	+0.1
1,847,733	+		PFLU_RS08255	0.89	-0.6
1,847,734	-		PFLU_RS08255	0.90	+0.9
1,847,734	-		PFLU_RS08255	0.90	+0.3
1,847,734	-		PFLU_RS08255	0.90	+0.9
1,847,734	-		PFLU_RS08255	0.90	-2.7
1,847,734	-		PFLU_RS08255	0.90	+1.5
1,847,734	-		PFLU_RS08255	0.90	+1.1
1,847,734	-		PFLU_RS08255	0.90	+0.5
1,847,734	-		PFLU_RS08255	0.90	-0.1
1,847,734	-		PFLU_RS08255	0.90	+1.9
1,847,735	+				+0.0
1,847,774	+				+0.4
1,847,775	-				-1.6
1,847,775	-				+0.1
1,847,792	-				+0.4
1,847,792	-				-0.6
1,847,826	+				+0.1
1,847,826	+				-0.4
1,847,826	+				-0.9
1,847,827	-				+0.8
1,847,827	-				+2.0
1,847,827	-				+1.5
1,847,827	-				-0.3
1,847,827	-				-0.6
1,847,827	-				+2.0
1,847,853	+				-0.1
1,847,853	+				-0.0
1,847,853	+				-0.5
1,847,853	+				-1.5
1,847,853	+				-1.2
1,847,853	+				-0.0
1,847,853	+				-1.2
1,847,854	-				+0.2
1,847,854	-				-2.0
1,847,854	-				+0.0
1,847,854	-				+0.1
1,847,854	-				-1.0
1,847,854	-				-0.8
1,847,860	-				-2.3
1,848,001	+		PFLU_RS08260	0.26	+0.2
1,848,002	-		PFLU_RS08260	0.26	+0.5
1,848,053	+		PFLU_RS08260	0.33	-0.4
1,848,053	+		PFLU_RS08260	0.33	-0.7
1,848,054	-		PFLU_RS08260	0.33	+0.9
1,848,054	-		PFLU_RS08260	0.33	+1.8
1,848,054	-		PFLU_RS08260	0.33	-1.5
1,848,057	+		PFLU_RS08260	0.33	+0.3
1,848,057	+		PFLU_RS08260	0.33	+1.8
1,848,058	-		PFLU_RS08260	0.33	+0.5
1,848,058	-		PFLU_RS08260	0.33	+0.7
1,848,578	+				-0.3
1,848,578	+				-0.9
1,848,579	-				-1.0
1,848,579	-				-1.0
1,848,590	-				-1.8
1,848,598	+				-1.0
1,848,618	+				-1.9
1,848,618	+				-3.0
1,848,619	-				-1.7
1,848,619	-				+0.3
1,848,664	+				+1.5
1,848,664	+				-0.4
1,848,664	+				+0.4
1,848,771	-		PFLU_RS08265	0.14	+1.7
1,848,771	-		PFLU_RS08265	0.14	+0.3
1,848,771	-		PFLU_RS08265	0.14	+0.5
1,848,844	-		PFLU_RS08265	0.24	+0.8
1,848,866	+		PFLU_RS08265	0.26	+1.1
1,848,866	+		PFLU_RS08265	0.26	-0.4
1,848,866	+		PFLU_RS08265	0.26	+0.2
1,848,866	+		PFLU_RS08265	0.26	-0.3
1,848,867	-		PFLU_RS08265	0.26	+0.4
1,848,867	-		PFLU_RS08265	0.26	+1.5
1,848,951	+		PFLU_RS08265	0.37	+0.6
1,848,951	+		PFLU_RS08265	0.37	+0.3
1,848,951	+		PFLU_RS08265	0.37	+1.4
1,848,951	+		PFLU_RS08265	0.37	+2.1
1,848,951	+		PFLU_RS08265	0.37	-1.8
1,848,951	+		PFLU_RS08265	0.37	+0.9
1,848,951	+		PFLU_RS08265	0.37	-0.3
1,848,951	+		PFLU_RS08265	0.37	-0.3
1,848,951	+		PFLU_RS08265	0.37	-0.7
1,848,951	+		PFLU_RS08265	0.37	-0.8
1,848,951	+		PFLU_RS08265	0.37	-1.0
1,848,951	+		PFLU_RS08265	0.37	+0.9
1,848,951	+		PFLU_RS08265	0.37	+0.7
1,848,952	-		PFLU_RS08265	0.37	+1.2
1,848,952	-		PFLU_RS08265	0.37	+0.9
1,848,952	-		PFLU_RS08265	0.37	+0.1
1,848,952	-		PFLU_RS08265	0.37	-0.0
1,848,952	-		PFLU_RS08265	0.37	-0.3
1,848,952	-		PFLU_RS08265	0.37	-0.3
1,848,952	-		PFLU_RS08265	0.37	+0.2
1,848,952	-		PFLU_RS08265	0.37	+0.8
1,848,952	-		PFLU_RS08265	0.37	+0.1
1,848,952	-		PFLU_RS08265	0.37	-0.7
1,849,049	+		PFLU_RS08265	0.49	+0.3
1,849,049	+		PFLU_RS08265	0.49	-0.3
1,849,049	+		PFLU_RS08265	0.49	-0.0
1,849,049	+		PFLU_RS08265	0.49	+2.5
1,849,049	+		PFLU_RS08265	0.49	+0.4
1,849,049	+		PFLU_RS08265	0.49	+0.0
1,849,050	-		PFLU_RS08265	0.49	+0.9
1,849,050	-		PFLU_RS08265	0.49	+0.1
1,849,050	-		PFLU_RS08265	0.49	-0.3
1,849,050	-		PFLU_RS08265	0.49	+3.1
1,849,050	-		PFLU_RS08265	0.49	-1.2
1,849,050	-		PFLU_RS08265	0.49	+1.8
1,849,050	-		PFLU_RS08265	0.49	-0.8
1,849,050	-		PFLU_RS08265	0.49	+1.2
1,849,051	+		PFLU_RS08265	0.49	+1.2
1,849,051	+		PFLU_RS08265	0.49	+0.6
1,849,051	+		PFLU_RS08265	0.49	-2.2
1,849,051	+		PFLU_RS08265	0.49	+1.3
1,849,052	-		PFLU_RS08265	0.50	+0.1
1,849,052	-		PFLU_RS08265	0.50	+0.8
1,849,201	+		PFLU_RS08265	0.68	+1.1
1,849,201	+		PFLU_RS08265	0.68	+0.5
1,849,201	+		PFLU_RS08265	0.68	+0.7
1,849,201	+		PFLU_RS08265	0.68	+0.5
1,849,201	+		PFLU_RS08265	0.68	-0.1
1,849,201	+		PFLU_RS08265	0.68	-0.8
1,849,201	+		PFLU_RS08265	0.68	+1.1
1,849,201	+		PFLU_RS08265	0.68	+1.5
1,849,201	+		PFLU_RS08265	0.68	+0.8
1,849,201	+		PFLU_RS08265	0.68	+0.4
1,849,201	+		PFLU_RS08265	0.68	-0.5
1,849,201	+		PFLU_RS08265	0.68	+0.8
1,849,201	+		PFLU_RS08265	0.68	+0.1
1,849,201	+		PFLU_RS08265	0.68	+0.2
1,849,201	+		PFLU_RS08265	0.68	-0.6
1,849,201	+		PFLU_RS08265	0.68	+0.9
1,849,201	+		PFLU_RS08265	0.68	+1.1
1,849,201	+		PFLU_RS08265	0.68	+1.4
1,849,201	+		PFLU_RS08265	0.68	+1.0
1,849,201	+		PFLU_RS08265	0.68	-0.5
1,849,201	+		PFLU_RS08265	0.68	+0.5
1,849,201	+		PFLU_RS08265	0.68	-0.3
1,849,201	+		PFLU_RS08265	0.68	+0.3
1,849,201	+		PFLU_RS08265	0.68	-0.9
1,849,201	+		PFLU_RS08265	0.68	-0.9
1,849,201	+		PFLU_RS08265	0.68	-0.4
1,849,201	+		PFLU_RS08265	0.68	+0.4
1,849,201	+		PFLU_RS08265	0.68	+1.3
1,849,201	+		PFLU_RS08265	0.68	+0.9
1,849,201	+		PFLU_RS08265	0.68	-0.4
1,849,201	+		PFLU_RS08265	0.68	+0.2
1,849,201	+		PFLU_RS08265	0.68	-0.5
1,849,201	+		PFLU_RS08265	0.68	+1.3
1,849,201	+		PFLU_RS08265	0.68	+0.2
1,849,202	-		PFLU_RS08265	0.68	-1.5
1,849,202	-		PFLU_RS08265	0.68	-0.2
1,849,202	-		PFLU_RS08265	0.68	-0.0
1,849,202	-		PFLU_RS08265	0.68	+1.1
1,849,202	-		PFLU_RS08265	0.68	-0.5
1,849,202	-		PFLU_RS08265	0.68	+0.1
1,849,202	-		PFLU_RS08265	0.68	+0.4
1,849,202	-		PFLU_RS08265	0.68	+0.4
1,849,202	-		PFLU_RS08265	0.68	-0.6
1,849,202	-		PFLU_RS08265	0.68	+0.1
1,849,202	-		PFLU_RS08265	0.68	+1.1
1,849,202	-		PFLU_RS08265	0.68	+1.5
1,849,202	-		PFLU_RS08265	0.68	+0.1
1,849,202	-		PFLU_RS08265	0.68	-0.4
1,849,202	-		PFLU_RS08265	0.68	-2.3
1,849,202	-		PFLU_RS08265	0.68	-0.5
1,849,202	-		PFLU_RS08265	0.68	+0.7
1,849,202	-		PFLU_RS08265	0.68	+1.4
1,849,202	-		PFLU_RS08265	0.68	+1.4
1,849,202	-		PFLU_RS08265	0.68	+0.4
1,849,202	-		PFLU_RS08265	0.68	+0.7
1,849,202	-		PFLU_RS08265	0.68	-0.7
1,849,202	-		PFLU_RS08265	0.68	+0.6
1,849,202	-		PFLU_RS08265	0.68	-0.5
1,849,202	-		PFLU_RS08265	0.68	-0.1
1,849,202	-		PFLU_RS08265	0.68	+1.2
1,849,202	-		PFLU_RS08265	0.68	+1.2
1,849,202	-		PFLU_RS08265	0.68	+1.2
1,849,202	-		PFLU_RS08265	0.68	+0.3
1,849,202	-		PFLU_RS08265	0.68	-0.5
1,849,202	-		PFLU_RS08265	0.68	+0.5
1,849,202	-		PFLU_RS08265	0.68	+0.5
1,849,202	-		PFLU_RS08265	0.68	+0.5
1,849,202	-		PFLU_RS08265	0.68	-0.5
1,849,202	-		PFLU_RS08265	0.68	+0.8
1,849,202	-		PFLU_RS08265	0.68	+1.3
1,849,202	-		PFLU_RS08265	0.68	+1.5
1,849,202	-		PFLU_RS08265	0.68	+2.0
1,849,203	+		PFLU_RS08265	0.69	+0.1
1,849,203	+		PFLU_RS08265	0.69	+0.4
1,849,203	+		PFLU_RS08265	0.69	+0.1
1,849,203	+		PFLU_RS08265	0.69	-1.0
1,849,203	+		PFLU_RS08265	0.69	-0.0
1,849,203	+		PFLU_RS08265	0.69	+1.4
1,849,203	+		PFLU_RS08265	0.69	+0.6
1,849,203	+		PFLU_RS08265	0.69	+1.4
1,849,203	+		PFLU_RS08265	0.69	+1.4
1,849,203	+		PFLU_RS08265	0.69	-0.6
1,849,203	+		PFLU_RS08265	0.69	+0.3
1,849,203	+		PFLU_RS08265	0.69	+0.8
1,849,204	-		PFLU_RS08265	0.69	-0.2
1,849,204	-		PFLU_RS08265	0.69	-0.2
1,849,204	-		PFLU_RS08265	0.69	+0.3
1,849,204	-		PFLU_RS08265	0.69	-1.6
1,849,204	-		PFLU_RS08265	0.69	+0.1
1,849,204	-		PFLU_RS08265	0.69	-1.1
1,849,204	-		PFLU_RS08265	0.69	+0.7
1,849,204	-		PFLU_RS08265	0.69	+0.2
1,849,204	-		PFLU_RS08265	0.69	+0.5
1,849,204	-		PFLU_RS08265	0.69	+1.0
1,849,204	-		PFLU_RS08265	0.69	+0.7
1,849,204	-		PFLU_RS08265	0.69	-1.0
1,849,204	-		PFLU_RS08265	0.69	-1.0
1,849,204	-		PFLU_RS08265	0.69	+0.5
1,849,204	-		PFLU_RS08265	0.69	-0.6
1,849,204	-		PFLU_RS08265	0.69	-1.6
1,849,213	-		PFLU_RS08265	0.70	+0.2
1,849,337	+		PFLU_RS08265	0.85	-0.9
1,849,337	+		PFLU_RS08265	0.85	+0.2
1,849,337	+		PFLU_RS08265	0.85	-1.8
1,849,337	+		PFLU_RS08265	0.85	-2.5
1,849,338	-		PFLU_RS08265	0.85	+0.2
1,849,340	+		PFLU_RS08265	0.86	+0.9
1,849,340	+		PFLU_RS08265	0.86	+0.5
1,849,340	+		PFLU_RS08265	0.86	+1.5
1,849,340	+		PFLU_RS08265	0.86	-0.5
1,849,340	+		PFLU_RS08265	0.86	+0.2
1,849,340	+		PFLU_RS08265	0.86	-1.1
1,849,340	+		PFLU_RS08265	0.86	-0.4
1,849,340	+		PFLU_RS08265	0.86	-0.6
1,849,340	+		PFLU_RS08265	0.86	+0.4
1,849,340	+		PFLU_RS08265	0.86	+0.7
1,849,340	+		PFLU_RS08265	0.86	-0.8
1,849,340	+		PFLU_RS08265	0.86	+1.5
1,849,341	-		PFLU_RS08265	0.86	-0.3
1,849,341	-		PFLU_RS08265	0.86	+0.7
1,849,341	-		PFLU_RS08265	0.86	-0.3
1,849,341	-		PFLU_RS08265	0.86	+0.5
1,849,341	-		PFLU_RS08265	0.86	-0.5
1,849,341	-		PFLU_RS08265	0.86	-0.0
1,849,341	-		PFLU_RS08265	0.86	+0.4
1,849,341	-		PFLU_RS08265	0.86	+0.5
1,849,341	-		PFLU_RS08265	0.86	-0.4
1,849,341	-		PFLU_RS08265	0.86	+2.0
1,849,341	-		PFLU_RS08265	0.86	+0.9
1,849,341	-		PFLU_RS08265	0.86	+0.3
1,849,341	-		PFLU_RS08265	0.86	+1.1
1,849,341	-		PFLU_RS08265	0.86	+0.7
1,849,341	-		PFLU_RS08265	0.86	-0.2
1,849,341	-		PFLU_RS08265	0.86	+0.7
1,849,341	-		PFLU_RS08265	0.86	+0.1
1,849,393	-				+0.0
1,849,549	+		PFLU_RS08270	0.26	-1.3
1,849,549	+		PFLU_RS08270	0.26	+2.5
1,849,550	-		PFLU_RS08270	0.26	+0.7
1,849,550	-		PFLU_RS08270	0.26	+0.4
1,849,560	+		PFLU_RS08270	0.29	-0.8
1,849,561	-		PFLU_RS08270	0.29	-1.1
1,849,599	+		PFLU_RS08270	0.39	+0.5
1,849,599	+		PFLU_RS08270	0.39	+1.5
1,849,600	-		PFLU_RS08270	0.40	-0.5
1,849,711	-		PFLU_RS08270	0.70	+0.5
1,849,772	+		PFLU_RS08270	0.87	-0.1
1,849,772	+		PFLU_RS08270	0.87	-1.8
1,849,772	+		PFLU_RS08270	0.87	-1.8
1,849,772	+		PFLU_RS08270	0.87	-0.1
1,849,773	-		PFLU_RS08270	0.87	+1.5
1,849,773	-		PFLU_RS08270	0.87	-0.0
1,849,776	+		PFLU_RS08270	0.88	+3.0
1,849,776	+		PFLU_RS08270	0.88	-0.5
1,849,776	+		PFLU_RS08270	0.88	+0.0
1,849,776	+		PFLU_RS08270	0.88	-0.2
1,849,776	+		PFLU_RS08270	0.88	-0.2
1,849,777	-		PFLU_RS08270	0.88	-1.5
1,849,777	-		PFLU_RS08270	0.88	-0.2
1,849,777	-		PFLU_RS08270	0.88	-0.6
1,849,777	-		PFLU_RS08270	0.88	-0.0
1,849,777	-		PFLU_RS08270	0.88	-0.2
1,849,861	+				+0.5
1,849,861	+				+0.9
1,849,909	+				+0.2
1,849,909	+				-0.5
1,849,909	+				-0.9
1,849,909	+				+0.8
1,849,909	+				+0.7
1,849,910	-				-2.3
1,849,910	-				+1.1
1,849,910	-				-1.0
1,849,910	-				+0.2
1,849,910	-				+0.2
1,849,910	-				+2.0
1,849,910	-				-0.0
1,849,910	-				-0.6
1,849,910	-				+1.6
1,849,910	-				-0.2
1,849,946	+				+2.0
1,849,946	+				+0.1
1,849,946	+				+0.3
1,849,946	+				-0.3
1,849,947	-				-1.3
1,850,021	+		PFLU_RS08275	0.22	+0.2
1,850,021	+		PFLU_RS08275	0.22	-0.1
1,850,022	-		PFLU_RS08275	0.22	+0.5
1,850,022	-		PFLU_RS08275	0.22	-1.8
1,850,022	-		PFLU_RS08275	0.22	-0.5
1,850,022	-		PFLU_RS08275	0.22	-0.4
1,850,022	-		PFLU_RS08275	0.22	+0.7
1,850,076	+		PFLU_RS08275	0.36	+1.0
1,850,077	-		PFLU_RS08275	0.36	+0.1
1,850,077	-		PFLU_RS08275	0.36	-0.5
1,850,090	+		PFLU_RS08275	0.40	-0.5
1,850,096	+		PFLU_RS08275	0.41	+1.1
1,850,096	+		PFLU_RS08275	0.41	-1.5
1,850,096	+		PFLU_RS08275	0.41	-2.3
1,850,096	+		PFLU_RS08275	0.41	+1.2
1,850,096	+		PFLU_RS08275	0.41	-0.1
1,850,096	+		PFLU_RS08275	0.41	-0.2
1,850,096	+		PFLU_RS08275	0.41	-0.5
1,850,096	+		PFLU_RS08275	0.41	+1.5
1,850,096	+		PFLU_RS08275	0.41	-1.9
1,850,097	-		PFLU_RS08275	0.41	+1.5
1,850,097	-		PFLU_RS08275	0.41	-0.8
1,850,097	-		PFLU_RS08275	0.41	-1.2
1,850,097	-		PFLU_RS08275	0.41	+0.2
1,850,097	-		PFLU_RS08275	0.41	+1.1
1,850,097	-		PFLU_RS08275	0.41	-0.3
1,850,116	+		PFLU_RS08275	0.46	-1.3
1,850,119	+		PFLU_RS08275	0.47	+0.5
1,850,119	+		PFLU_RS08275	0.47	+0.3
1,850,119	+		PFLU_RS08275	0.47	+0.2
1,850,119	+		PFLU_RS08275	0.47	-0.0
1,850,120	-		PFLU_RS08275	0.47	+1.0
1,850,120	-		PFLU_RS08275	0.47	-1.5
1,850,120	-		PFLU_RS08275	0.47	+3.1
1,850,124	+		PFLU_RS08275	0.48	-0.0
1,850,129	+		PFLU_RS08275	0.50	-1.1
1,850,129	+		PFLU_RS08275	0.50	-1.1
1,850,129	+		PFLU_RS08275	0.50	+0.5
1,850,129	+		PFLU_RS08275	0.50	-1.2
1,850,129	+		PFLU_RS08275	0.50	+1.0
1,850,130	-		PFLU_RS08275	0.50	-0.5
1,850,130	-		PFLU_RS08275	0.50	-0.3
1,850,130	-		PFLU_RS08275	0.50	+0.2
1,850,172	+		PFLU_RS08275	0.61	+0.4
1,850,173	-		PFLU_RS08275	0.61	+1.0
1,850,193	-		PFLU_RS08275	0.66	+1.1
1,850,283	-		PFLU_RS08275	0.89	-0.3
1,850,341	-				-0.5
1,850,348	-				+0.4
1,850,378	-				+0.3