Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1993

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,109,544	+		Psest_1991	0.57	-0.9
2,109,552	+		Psest_1991	0.58	+0.0
2,109,577	+		Psest_1991	0.62	-0.6
2,109,577	+		Psest_1991	0.62	+0.3
2,109,646	+		Psest_1991	0.74	+0.6
2,109,646	+		Psest_1991	0.74	+0.1
2,109,647	-		Psest_1991	0.74	+0.9
2,109,664	+		Psest_1991	0.77	+0.5
2,109,665	-		Psest_1991	0.77	-0.6
2,109,686	+		Psest_1991	0.80	+0.3
2,109,686	+		Psest_1991	0.80	-1.3
2,109,686	+		Psest_1991	0.80	+0.5
2,109,686	+		Psest_1991	0.80	-2.1
2,109,687	-		Psest_1991	0.80	+1.6
2,109,687	-		Psest_1991	0.80	+0.4
2,109,688	+		Psest_1991	0.81	+0.4
2,109,688	+		Psest_1991	0.81	+1.5
2,109,688	+		Psest_1991	0.81	-1.4
2,109,688	+		Psest_1991	0.81	+0.1
2,109,688	+		Psest_1991	0.81	-0.4
2,109,688	+		Psest_1991	0.81	-0.2
2,109,688	+		Psest_1991	0.81	-0.1
2,109,688	+		Psest_1991	0.81	+0.2
2,109,689	-		Psest_1991	0.81	-0.2
2,109,689	-		Psest_1991	0.81	+0.4
2,109,689	-		Psest_1991	0.81	-0.9
2,109,694	+		Psest_1991	0.82	-0.4
2,109,694	+		Psest_1991	0.82	-1.1
2,109,694	+		Psest_1991	0.82	-1.3
2,109,695	-		Psest_1991	0.82	+0.2
2,109,695	-		Psest_1991	0.82	-0.6
2,109,695	-		Psest_1991	0.82	-0.4
2,109,793	-				+0.1
2,109,796	+				+0.3
2,109,797	-				+1.8
2,109,797	-				+0.0
2,110,465	+				-1.1
2,110,465	+				-2.2
2,110,534	+				-2.0
2,110,534	+				+0.8
2,110,534	+				+0.0
2,110,534	+				+0.6
2,110,534	+				+1.1
2,110,534	+				+0.3
2,110,535	-				+0.7
2,110,535	-				-0.1
2,110,535	-				+0.5
2,110,535	-				-0.5
2,110,686	+		Psest_1993	0.35	-0.3
2,110,686	+		Psest_1993	0.35	-0.8
2,110,687	-		Psest_1993	0.35	-0.4
2,110,840	+		Psest_1993	0.63	-0.6
2,110,841	-		Psest_1993	0.63	-0.6
2,110,860	+		Psest_1993	0.66	-0.2
2,110,860	+		Psest_1993	0.66	-0.1
2,110,860	+		Psest_1993	0.66	+0.3
2,110,860	+		Psest_1993	0.66	-1.1
2,110,861	-		Psest_1993	0.66	+0.1
2,110,915	-		Psest_1993	0.76	-0.0
2,110,959	-		Psest_1993	0.84	-0.1
2,110,959	-		Psest_1993	0.84	-1.9
2,111,120	+				+0.3
2,111,120	+				-0.6
2,111,120	+				-2.2
2,111,120	+				-1.1
2,111,120	+				-0.1
2,111,120	+				+1.8
2,111,120	+				-1.1
2,111,120	+				-2.0
2,111,120	+				-0.3
2,111,121	-				+0.1
2,111,121	-				+0.6
2,111,121	-				+1.3
2,111,121	-				-1.3
2,111,121	-				+1.7
2,111,121	-				-0.3
2,111,121	-				+0.5
2,111,121	-				-1.4
2,111,121	-				+0.3
2,111,121	-				+0.4
2,111,121	-				-0.0
2,111,121	-				+1.8
2,111,121	-				-0.6
2,111,121	-				-0.9
2,111,156	+				+1.4
2,111,157	-				+0.4
2,111,157	-				-2.7
2,111,165	+				-1.1
2,111,165	+				+0.2
2,111,166	-				+0.6
2,111,207	+				+1.3
2,111,207	+				+0.2
2,111,245	+				-0.4
2,111,349	+		Psest_1994	0.27	+1.1
2,111,349	+		Psest_1994	0.27	-2.0
2,111,350	-		Psest_1994	0.27	-1.7
2,111,375	-		Psest_1994	0.31	-0.3
2,111,588	+		Psest_1994	0.67	+0.7
2,111,588	+		Psest_1994	0.67	+0.4
2,111,588	+		Psest_1994	0.67	+1.6
2,111,588	+		Psest_1994	0.67	+1.9
2,111,588	+		Psest_1994	0.67	-0.4
2,111,588	+		Psest_1994	0.67	+0.5
2,111,588	+		Psest_1994	0.67	-0.1
2,111,589	-		Psest_1994	0.67	-0.8
2,111,685	+		Psest_1994	0.83	+2.3
2,111,742	+				+2.2
2,111,742	+				-0.3
2,111,742	+				-0.2
2,111,742	+				+0.2
2,111,742	+				-1.6
2,111,742	+				-1.1
2,111,742	+				-1.3
2,111,742	+				-0.2
2,111,742	+				+0.7
2,111,742	+				+1.6
2,111,742	+				+1.5
2,111,743	-				+1.5
2,111,743	-				-0.3
2,111,743	-				-0.5
2,111,743	-				+0.2
2,111,743	-				+1.4
2,111,743	-				+0.7
2,111,743	-				-1.2
2,111,743	-				-0.1
2,111,746	+				-1.3
2,111,746	+				-1.7
2,111,897	+				+2.5
2,111,897	+				+0.8
2,111,934	+				+1.7
2,111,977	-				+0.3