Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1590

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,693,450	-		Psest_1588	0.56	-0.9
1,694,206	+				-1.0
1,694,207	-				+1.0
1,694,261	+				+0.2
1,694,261	+				+0.1
1,694,261	+				-0.1
1,694,297	+				+0.2
1,694,451	-		Psest_1590	0.14	+0.1
1,694,580	+		Psest_1590	0.22	+2.0
1,694,580	+		Psest_1590	0.22	+0.1
1,694,580	+		Psest_1590	0.22	+0.6
1,694,597	+		Psest_1590	0.22	+0.6
1,694,988	-		Psest_1590	0.44	+0.9
1,695,134	+		Psest_1590	0.53	+0.4
1,695,134	+		Psest_1590	0.53	+1.0
1,695,134	+		Psest_1590	0.53	-1.2
1,695,134	+		Psest_1590	0.53	+0.9
1,695,134	+		Psest_1590	0.53	-0.1
1,695,134	+		Psest_1590	0.53	+1.0
1,695,134	+		Psest_1590	0.53	+0.6
1,695,135	-		Psest_1590	0.53	+0.5
1,695,135	-		Psest_1590	0.53	-0.2
1,695,233	+		Psest_1590	0.58	+0.6
1,695,233	+		Psest_1590	0.58	-0.2
1,695,233	+		Psest_1590	0.58	-0.3
1,695,234	-		Psest_1590	0.58	-0.1
1,695,234	-		Psest_1590	0.58	+0.8
1,695,234	-		Psest_1590	0.58	-0.3
1,695,239	+		Psest_1590	0.59	+0.3
1,695,240	-		Psest_1590	0.59	-1.0
1,695,240	-		Psest_1590	0.59	+0.3
1,695,240	-		Psest_1590	0.59	-0.1
1,695,240	-		Psest_1590	0.59	+0.9
1,695,380	+		Psest_1590	0.66	-0.1
1,695,380	+		Psest_1590	0.66	+0.3
1,695,380	+		Psest_1590	0.66	-1.6
1,695,381	-		Psest_1590	0.67	+0.7
1,695,381	-		Psest_1590	0.67	-0.2
1,695,383	+		Psest_1590	0.67	-0.6
1,695,383	+		Psest_1590	0.67	+0.4
1,695,384	-		Psest_1590	0.67	+0.6
1,695,451	+		Psest_1590	0.70	+1.1
1,695,451	+		Psest_1590	0.70	+1.7
1,695,452	-		Psest_1590	0.71	-1.7
1,695,470	+		Psest_1590	0.72	+0.9
1,695,471	-		Psest_1590	0.72	+0.4
1,695,471	-		Psest_1590	0.72	-1.1
1,695,555	-		Psest_1590	0.76	-2.4
1,695,560	+		Psest_1590	0.77	-0.9
1,695,560	+		Psest_1590	0.77	-1.5
1,695,561	-		Psest_1590	0.77	-0.3
1,695,596	+		Psest_1590	0.79	-0.7
1,695,596	+		Psest_1590	0.79	-0.4
1,695,596	+		Psest_1590	0.79	+0.3
1,695,596	+		Psest_1590	0.79	-0.9
1,695,596	+		Psest_1590	0.79	-0.7
1,695,596	+		Psest_1590	0.79	+0.3
1,695,596	+		Psest_1590	0.79	+0.4
1,695,596	+		Psest_1590	0.79	+1.0
1,695,596	+		Psest_1590	0.79	+0.6
1,695,596	+		Psest_1590	0.79	-1.1
1,695,596	+		Psest_1590	0.79	-0.1
1,695,597	-		Psest_1590	0.79	-0.0
1,695,597	-		Psest_1590	0.79	-0.9
1,695,597	-		Psest_1590	0.79	+0.4
1,695,597	-		Psest_1590	0.79	-2.2
1,695,597	-		Psest_1590	0.79	-2.5
1,695,597	-		Psest_1590	0.79	+0.3
1,695,597	-		Psest_1590	0.79	-2.0
1,695,597	-		Psest_1590	0.79	-1.5
1,695,597	-		Psest_1590	0.79	-0.3
1,696,050	+				-0.2
1,696,051	-				-1.7
1,696,097	+				+0.5
1,696,177	+				+0.5
1,696,177	+				+2.0
1,696,178	-				-1.8
1,696,178	-				-0.1
1,696,178	-				-0.9
1,696,178	-				-1.7
1,696,209	+				-0.1
1,696,250	+		Psest_1591	0.12	+1.7
1,696,250	+		Psest_1591	0.12	+2.0
1,696,250	+		Psest_1591	0.12	+0.3
1,696,545	+		Psest_1591	0.57	+0.3
1,696,545	+		Psest_1591	0.57	+1.0
1,696,545	+		Psest_1591	0.57	+0.1
1,696,545	+		Psest_1591	0.57	-0.1
1,696,546	-		Psest_1591	0.57	+0.7
1,696,546	-		Psest_1591	0.57	+0.7
1,696,546	-		Psest_1591	0.57	-0.3
1,696,547	+		Psest_1591	0.57	+1.6
1,696,547	+		Psest_1591	0.57	-1.0
1,696,547	+		Psest_1591	0.57	+0.9
1,696,548	-		Psest_1591	0.57	+0.9
1,696,548	-		Psest_1591	0.57	-1.9
1,696,815	+				-0.1
1,696,815	+				-0.4
1,696,816	-				+3.3
1,696,816	-				-1.5
1,696,816	-				+0.2
1,696,816	-				+2.1
1,696,816	-				-1.6
1,696,858	-				+1.7
1,696,900	+		Psest_1592	0.14	+1.1
1,696,900	+		Psest_1592	0.14	-1.2
1,696,900	+		Psest_1592	0.14	-1.2
1,696,900	+		Psest_1592	0.14	-0.6
1,696,900	+		Psest_1592	0.14	+0.5
1,696,901	-		Psest_1592	0.14	-0.1
1,696,901	-		Psest_1592	0.14	-0.9
1,696,901	-		Psest_1592	0.14	-0.5
1,696,901	-		Psest_1592	0.14	-0.9