Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28950

Experiment: 4-Hydroxybenzoic Acid (C) 1.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid (C) 1.5 mM
6,436,315	-		PFLU_RS28945	0.26	+0.5
6,436,423	+		PFLU_RS28945	0.34	+0.6
6,436,424	-		PFLU_RS28945	0.34	-0.7
6,436,470	-		PFLU_RS28945	0.38	-0.4
6,436,489	+		PFLU_RS28945	0.39	+0.1
6,436,489	+		PFLU_RS28945	0.39	+2.5
6,436,490	-		PFLU_RS28945	0.39	+0.5
6,436,490	-		PFLU_RS28945	0.39	-0.4
6,436,561	+		PFLU_RS28945	0.45	+0.9
6,436,561	+		PFLU_RS28945	0.45	+1.3
6,436,562	-		PFLU_RS28945	0.45	-1.1
6,436,562	-		PFLU_RS28945	0.45	-0.5
6,436,562	-		PFLU_RS28945	0.45	+0.5
6,436,562	-		PFLU_RS28945	0.45	-0.1
6,436,606	+		PFLU_RS28945	0.48	-0.0
6,436,642	+		PFLU_RS28945	0.51	+0.3
6,436,643	-		PFLU_RS28945	0.51	-0.2
6,436,766	+		PFLU_RS28945	0.60	-0.5
6,436,766	+		PFLU_RS28945	0.60	-0.3
6,436,767	-		PFLU_RS28945	0.60	-0.2
6,436,767	-		PFLU_RS28945	0.60	+0.1
6,436,767	-		PFLU_RS28945	0.60	-0.2
6,436,767	-		PFLU_RS28945	0.60	+1.1
6,436,767	-		PFLU_RS28945	0.60	+0.9
6,436,767	-		PFLU_RS28945	0.60	-1.7
6,436,767	-		PFLU_RS28945	0.60	-2.4
6,436,767	-		PFLU_RS28945	0.60	+0.9
6,436,768	+		PFLU_RS28945	0.60	+2.9
6,436,768	+		PFLU_RS28945	0.60	-0.0
6,436,769	-		PFLU_RS28945	0.60	+0.5
6,436,769	-		PFLU_RS28945	0.60	+0.1
6,436,841	+		PFLU_RS28945	0.66	+0.2
6,436,842	-		PFLU_RS28945	0.66	+0.4
6,436,842	-		PFLU_RS28945	0.66	+0.1
6,436,909	+		PFLU_RS28945	0.71	+1.0
6,436,909	+		PFLU_RS28945	0.71	+0.9
6,436,909	+		PFLU_RS28945	0.71	-1.5
6,436,910	-		PFLU_RS28945	0.71	+1.1
6,436,910	-		PFLU_RS28945	0.71	+2.9
6,436,910	-		PFLU_RS28945	0.71	-0.1
6,436,910	-		PFLU_RS28945	0.71	+0.5
6,436,910	-		PFLU_RS28945	0.71	-1.1
6,436,910	-		PFLU_RS28945	0.71	+1.0
6,436,965	-		PFLU_RS28945	0.75	+0.6
6,436,965	-		PFLU_RS28945	0.75	-2.6
6,437,071	+		PFLU_RS28945	0.83	-0.1
6,437,071	+		PFLU_RS28945	0.83	-0.8
6,437,072	-		PFLU_RS28945	0.83	+0.3
6,437,072	-		PFLU_RS28945	0.83	-0.3
6,437,072	-		PFLU_RS28945	0.83	+1.4
6,437,072	-		PFLU_RS28945	0.83	-2.1
6,437,072	-		PFLU_RS28945	0.83	-0.3
6,437,072	-		PFLU_RS28945	0.83	+0.9
6,437,072	-		PFLU_RS28945	0.83	+0.9
6,437,138	-		PFLU_RS28945	0.88	-0.8
6,437,161	+				+0.4
6,437,266	+				+0.6
6,437,282	+				+1.2
6,437,283	-				+0.6
6,437,284	+				+0.9
6,437,284	+				-1.4
6,437,284	+				+3.4
6,437,284	+				-0.0
6,437,284	+				-1.5
6,437,284	+				+1.3
6,437,284	+				+1.3
6,437,284	+				+1.4
6,437,284	+				+0.9
6,437,284	+				-0.1
6,437,284	+				+1.4
6,437,284	+				+2.4
6,437,284	+				+1.0
6,437,284	+				+2.3
6,437,284	+				+1.3
6,437,284	+				+3.0
6,437,284	+				+1.3
6,437,284	+				+0.9
6,437,284	+				+0.5
6,437,284	+				+0.8
6,437,284	+				+1.7
6,437,284	+				-0.0
6,437,284	+				+1.1
6,437,284	+				+1.3
6,437,284	+				+2.9
6,437,284	+				-0.8
6,437,284	+				-0.1
6,437,284	+				+1.8
6,437,284	+				+1.2
6,437,284	+				-0.5
6,437,284	+				+1.9
6,437,284	+				-0.7
6,437,284	+				-1.1
6,437,284	+				+0.7
6,437,284	+				-0.6
6,437,284	+				+0.4
6,437,284	+				+0.3
6,437,284	+				+1.3
6,437,284	+				+0.9
6,437,284	+				+2.0
6,437,284	+				+0.4
6,437,284	+				+1.1
6,437,284	+				+0.6
6,437,284	+				+0.9
6,437,284	+				-0.3
6,437,284	+				+2.3
6,437,284	+				+2.4
6,437,284	+				+3.1
6,437,284	+				-1.7
6,437,284	+				+0.6
6,437,284	+				+0.2
6,437,284	+				-0.4
6,437,284	+				-0.5
6,437,284	+				-1.9
6,437,285	-				+0.5
6,437,285	-				-0.1
6,437,285	-				+1.7
6,437,285	-				+0.2
6,437,285	-				+1.1
6,437,285	-				+1.4
6,437,285	-				+0.1
6,437,285	-				+1.2
6,437,285	-				+0.1
6,437,285	-				+1.3
6,437,285	-				-0.8
6,437,285	-				+0.4
6,437,285	-				+0.5
6,437,285	-				+1.2
6,437,285	-				-1.1
6,437,285	-				+1.5
6,437,285	-				+0.3
6,437,285	-				+2.2
6,437,285	-				+2.0
6,437,285	-				+1.9
6,437,285	-				-0.1
6,437,285	-				+0.5
6,437,285	-				+0.4
6,437,285	-				-0.0
6,437,285	-				+1.1
6,437,285	-				+0.2
6,437,285	-				-0.2
6,437,285	-				+1.5
6,437,285	-				+0.6
6,437,285	-				+0.3
6,437,285	-				-0.6
6,437,285	-				+0.1
6,437,285	-				+0.1
6,437,285	-				+1.3
6,437,285	-				+2.0
6,437,285	-				-0.6
6,437,314	-				+0.0
6,437,314	-				+0.1
6,437,394	+		PFLU_RS28950	0.15	+1.8
6,437,394	+		PFLU_RS28950	0.15	+0.7
6,437,395	-		PFLU_RS28950	0.15	+1.9
6,437,395	-		PFLU_RS28950	0.15	+0.3
6,437,395	-		PFLU_RS28950	0.15	+1.3
6,437,412	+		PFLU_RS28950	0.18	+0.7
6,437,412	+		PFLU_RS28950	0.18	+0.5
6,437,412	+		PFLU_RS28950	0.18	+1.6
6,437,412	+		PFLU_RS28950	0.18	-0.1
6,437,412	+		PFLU_RS28950	0.18	-0.0
6,437,412	+		PFLU_RS28950	0.18	+0.5
6,437,413	-		PFLU_RS28950	0.18	+0.4
6,437,413	-		PFLU_RS28950	0.18	+1.3
6,437,413	-		PFLU_RS28950	0.18	-0.5
6,437,413	-		PFLU_RS28950	0.18	+0.7
6,437,413	-		PFLU_RS28950	0.18	+0.5
6,437,413	-		PFLU_RS28950	0.18	+0.1
6,437,413	-		PFLU_RS28950	0.18	+0.9
6,437,413	-		PFLU_RS28950	0.18	-0.0
6,437,413	-		PFLU_RS28950	0.18	+0.7
6,437,413	-		PFLU_RS28950	0.18	+0.2
6,437,413	-		PFLU_RS28950	0.18	+0.6
6,437,413	-		PFLU_RS28950	0.18	+0.9
6,437,413	-		PFLU_RS28950	0.18	+0.9
6,437,413	-		PFLU_RS28950	0.18	+0.2
6,437,413	-		PFLU_RS28950	0.18	+1.2
6,437,413	-		PFLU_RS28950	0.18	-1.3
6,437,680	+		PFLU_RS28950	0.66	+0.9
6,437,847	+				-1.7
6,437,863	+				+1.4
6,437,864	-				-0.1
6,437,864	-				+0.1
6,437,864	-				+0.7
6,437,864	-				+0.4
6,437,877	+				-0.4
6,437,877	+				+2.3
6,437,877	+				+0.5
6,437,878	-				+1.6
6,437,878	-				-2.8
6,437,900	+				+1.2
6,437,901	-				-0.0
6,437,901	-				+0.1
6,437,901	-				-0.5
6,437,901	-				-0.8
6,437,915	+				+1.9
6,437,915	+				-0.1
6,437,915	+				+0.6
6,437,915	+				+1.9
6,437,916	-				-0.3
6,437,916	-				-0.1
6,437,916	-				-1.8
6,437,916	-				-0.1
6,437,916	-				+1.4
6,437,921	-				-2.3
6,437,935	+				+1.9
6,437,935	+				+1.5
6,437,935	+				-2.1
6,437,935	+				-0.4
6,437,935	+				-0.5
6,437,935	+				+1.1
6,437,936	-				-1.1
6,437,936	-				-0.9
6,437,936	-				-0.1
6,437,936	-				+0.7
6,437,936	-				-0.9
6,437,936	-				+0.4
6,437,936	-				+0.0
6,437,936	-				-0.8
6,437,944	+				-0.1
6,437,944	+				+1.1
6,437,945	-				+1.3
6,437,945	-				-0.6
6,438,054	+		PFLU_RS28955	0.22	+0.9
6,438,054	+		PFLU_RS28955	0.22	-0.9
6,438,054	+		PFLU_RS28955	0.22	+0.3
6,438,054	+		PFLU_RS28955	0.22	-0.1
6,438,054	+		PFLU_RS28955	0.22	+0.9
6,438,055	-		PFLU_RS28955	0.22	-0.5
6,438,055	-		PFLU_RS28955	0.22	-1.1
6,438,055	-		PFLU_RS28955	0.22	+0.1
6,438,055	-		PFLU_RS28955	0.22	-0.8
6,438,055	-		PFLU_RS28955	0.22	+0.4
6,438,055	-		PFLU_RS28955	0.22	-1.1
6,438,055	-		PFLU_RS28955	0.22	+0.9
6,438,058	+		PFLU_RS28955	0.24	-0.7
6,438,058	+		PFLU_RS28955	0.24	+1.3
6,438,059	-		PFLU_RS28955	0.24	-1.8
6,438,059	-		PFLU_RS28955	0.24	-1.3
6,438,076	+		PFLU_RS28955	0.32	-0.1
6,438,076	+		PFLU_RS28955	0.32	-0.8
6,438,076	+		PFLU_RS28955	0.32	-1.5
6,438,076	+		PFLU_RS28955	0.32	-0.1
6,438,076	+		PFLU_RS28955	0.32	+0.3
6,438,076	+		PFLU_RS28955	0.32	-0.6
6,438,076	+		PFLU_RS28955	0.32	+0.4
6,438,077	-		PFLU_RS28955	0.33	+0.7
6,438,077	-		PFLU_RS28955	0.33	-1.1
6,438,077	-		PFLU_RS28955	0.33	-0.3
6,438,077	-		PFLU_RS28955	0.33	+0.3
6,438,077	-		PFLU_RS28955	0.33	-1.1
6,438,077	-		PFLU_RS28955	0.33	+2.9
6,438,077	-		PFLU_RS28955	0.33	-0.6
6,438,077	-		PFLU_RS28955	0.33	-1.7
6,438,077	-		PFLU_RS28955	0.33	-0.3
6,438,096	+		PFLU_RS28955	0.42	-0.2
6,438,096	+		PFLU_RS28955	0.42	-0.5
6,438,096	+		PFLU_RS28955	0.42	-2.4
6,438,096	+		PFLU_RS28955	0.42	+0.7
6,438,096	+		PFLU_RS28955	0.42	-0.8
6,438,096	+		PFLU_RS28955	0.42	+0.3
6,438,096	+		PFLU_RS28955	0.42	+0.3
6,438,096	+		PFLU_RS28955	0.42	+0.0
6,438,096	+		PFLU_RS28955	0.42	+0.7
6,438,096	+		PFLU_RS28955	0.42	-0.8
6,438,096	+		PFLU_RS28955	0.42	+0.9
6,438,096	+		PFLU_RS28955	0.42	-0.3
6,438,096	+		PFLU_RS28955	0.42	+1.1
6,438,097	-		PFLU_RS28955	0.42	-1.7
6,438,097	-		PFLU_RS28955	0.42	-0.5
6,438,097	-		PFLU_RS28955	0.42	-1.4
6,438,097	-		PFLU_RS28955	0.42	-1.5
6,438,097	-		PFLU_RS28955	0.42	+0.9
6,438,097	-		PFLU_RS28955	0.42	-0.7
6,438,097	-		PFLU_RS28955	0.42	-0.3
6,438,097	-		PFLU_RS28955	0.42	-0.5
6,438,097	-		PFLU_RS28955	0.42	-1.0
6,438,099	+		PFLU_RS28955	0.43	+3.7
6,438,099	+		PFLU_RS28955	0.43	+1.0
6,438,099	+		PFLU_RS28955	0.43	-0.5
6,438,099	+		PFLU_RS28955	0.43	+0.6
6,438,099	+		PFLU_RS28955	0.43	+0.9
6,438,099	+		PFLU_RS28955	0.43	+0.5
6,438,099	+		PFLU_RS28955	0.43	+0.2
6,438,099	+		PFLU_RS28955	0.43	-0.1
6,438,099	+		PFLU_RS28955	0.43	+0.9
6,438,100	-		PFLU_RS28955	0.44	-1.8
6,438,100	-		PFLU_RS28955	0.44	-1.8
6,438,100	-		PFLU_RS28955	0.44	+1.9
6,438,100	-		PFLU_RS28955	0.44	-0.7
6,438,100	-		PFLU_RS28955	0.44	-0.5
6,438,100	-		PFLU_RS28955	0.44	+2.3
6,438,100	-		PFLU_RS28955	0.44	-0.5
6,438,100	-		PFLU_RS28955	0.44	-2.4
6,438,228	+				+0.3
6,438,228	+				-1.4
6,438,228	+				+0.2
6,438,229	-				+0.4
6,438,229	-				+1.1
6,438,259	+		PFLU_RS28960	0.14	+0.2
6,438,259	+		PFLU_RS28960	0.14	-0.7
6,438,259	+		PFLU_RS28960	0.14	+0.7
6,438,259	+		PFLU_RS28960	0.14	+0.1
6,438,260	-		PFLU_RS28960	0.14	-1.5
6,438,260	-		PFLU_RS28960	0.14	-0.8
6,438,260	-		PFLU_RS28960	0.14	+0.7
6,438,260	-		PFLU_RS28960	0.14	-0.9
6,438,313	+		PFLU_RS28960	0.31	-0.5
6,438,417	+		PFLU_RS28960	0.64	-0.9
6,438,417	+		PFLU_RS28960	0.64	+0.3
6,438,417	+		PFLU_RS28960	0.64	+0.2
6,438,417	+		PFLU_RS28960	0.64	+0.3
6,438,417	+		PFLU_RS28960	0.64	+1.1
6,438,417	+		PFLU_RS28960	0.64	-0.2
6,438,417	+		PFLU_RS28960	0.64	-0.7
6,438,418	-		PFLU_RS28960	0.64	-0.1
6,438,418	-		PFLU_RS28960	0.64	+0.5
6,438,418	-		PFLU_RS28960	0.64	+2.3
6,438,418	-		PFLU_RS28960	0.64	-0.2
6,438,418	-		PFLU_RS28960	0.64	+0.6
6,438,498	-		PFLU_RS28960	0.89	-0.5
6,438,551	+				+0.9
6,438,552	-				+1.4
6,438,552	-				+0.5
6,438,553	+				+1.9
6,438,553	+				+0.2
6,438,553	+				-2.8
6,438,553	+				-0.8
6,438,553	+				-0.5
6,438,553	+				-0.8
6,438,553	+				-2.9
6,438,553	+				+0.9
6,438,553	+				-0.1
6,438,553	+				+1.9
6,438,553	+				+0.1
6,438,553	+				+0.9
6,438,553	+				-1.7
6,438,553	+				+0.3
6,438,553	+				-0.8
6,438,553	+				+3.2
6,438,553	+				-0.1
6,438,553	+				-0.6
6,438,553	+				-1.6
6,438,553	+				-1.3
6,438,553	+				-2.0
6,438,553	+				-1.1
6,438,553	+				-1.4
6,438,553	+				+1.4
6,438,554	-				+0.3
6,438,554	-				+0.6
6,438,554	-				+0.7
6,438,554	-				-0.3
6,438,554	-				-0.1
6,438,554	-				-1.4
6,438,554	-				-1.7
6,438,554	-				-0.1
6,438,554	-				-0.5
6,438,554	-				-0.1
6,438,554	-				-1.5
6,438,554	-				-1.1
6,438,554	-				-0.2
6,438,554	-				-1.1
6,438,554	-				-1.9
6,438,613	-				-1.7
6,438,613	-				-0.7
6,438,666	+				-1.3
6,438,666	+				-1.3
6,438,666	+				+0.5
6,438,667	-				-2.2
6,438,673	+				-1.2
6,438,673	+				+0.4
6,438,673	+				-1.7
6,438,673	+				-1.0
6,438,673	+				-0.9
6,438,673	+				-1.6
6,438,674	-				-1.3
6,438,674	-				-2.9
6,438,674	-				-0.7
6,438,674	-				+0.3
6,438,711	+				-0.1
6,438,711	+				+1.9
6,438,711	+				-1.2
6,438,712	-				+1.9
6,438,712	-				-0.4
6,438,783	+				+0.3
6,438,783	+				+0.3
6,438,784	-				+0.7
6,438,784	-				+0.5
6,438,784	-				+0.4
6,438,784	-				-0.1
6,438,784	-				+1.1
6,438,784	-				-0.5
6,438,784	-				+0.1
6,438,784	-				-1.0