Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22870

Experiment: 4-Hydroxybenzoic Acid (C) 1.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid (C) 1.5 mM
5,146,536	+		PFLU_RS22865	0.64	+1.3
5,146,536	+		PFLU_RS22865	0.64	-0.2
5,146,536	+		PFLU_RS22865	0.64	+0.3
5,146,536	+		PFLU_RS22865	0.64	-0.2
5,146,536	+		PFLU_RS22865	0.64	+0.1
5,146,536	+		PFLU_RS22865	0.64	-0.2
5,146,536	+		PFLU_RS22865	0.64	-1.2
5,146,536	+		PFLU_RS22865	0.64	+0.5
5,146,536	+		PFLU_RS22865	0.64	-0.1
5,146,536	+		PFLU_RS22865	0.64	-1.0
5,146,536	+		PFLU_RS22865	0.64	-0.8
5,146,536	+		PFLU_RS22865	0.64	-0.6
5,146,536	+		PFLU_RS22865	0.64	+0.3
5,146,536	+		PFLU_RS22865	0.64	+0.7
5,146,536	+		PFLU_RS22865	0.64	+1.7
5,146,536	+		PFLU_RS22865	0.64	-0.6
5,146,536	+		PFLU_RS22865	0.64	-0.8
5,146,536	+		PFLU_RS22865	0.64	-0.2
5,146,536	+		PFLU_RS22865	0.64	+2.0
5,146,536	+		PFLU_RS22865	0.64	+0.0
5,146,536	+		PFLU_RS22865	0.64	+0.3
5,146,536	+		PFLU_RS22865	0.64	+1.1
5,146,536	+		PFLU_RS22865	0.64	-0.2
5,146,536	+		PFLU_RS22865	0.64	-1.2
5,146,537	-		PFLU_RS22865	0.64	-0.9
5,146,537	-		PFLU_RS22865	0.64	-0.1
5,146,537	-		PFLU_RS22865	0.64	+1.0
5,146,555	+		PFLU_RS22865	0.65	-2.0
5,146,555	+		PFLU_RS22865	0.65	+1.1
5,146,556	-		PFLU_RS22865	0.66	-0.4
5,146,578	+		PFLU_RS22865	0.67	+2.9
5,146,578	+		PFLU_RS22865	0.67	+0.7
5,146,578	+		PFLU_RS22865	0.67	+0.3
5,146,578	+		PFLU_RS22865	0.67	+1.5
5,146,578	+		PFLU_RS22865	0.67	+0.8
5,146,578	+		PFLU_RS22865	0.67	+0.3
5,146,578	+		PFLU_RS22865	0.67	+0.5
5,146,578	+		PFLU_RS22865	0.67	-2.0
5,146,578	+		PFLU_RS22865	0.67	+0.2
5,146,578	+		PFLU_RS22865	0.67	-0.3
5,146,578	+		PFLU_RS22865	0.67	-1.0
5,146,579	-		PFLU_RS22865	0.67	-0.8
5,146,579	-		PFLU_RS22865	0.67	-0.8
5,146,579	-		PFLU_RS22865	0.67	-0.2
5,146,579	-		PFLU_RS22865	0.67	+0.4
5,146,579	-		PFLU_RS22865	0.67	-0.1
5,146,579	-		PFLU_RS22865	0.67	-0.9
5,146,579	-		PFLU_RS22865	0.67	-0.6
5,146,579	-		PFLU_RS22865	0.67	+1.1
5,146,579	-		PFLU_RS22865	0.67	+0.3
5,146,579	-		PFLU_RS22865	0.67	-0.5
5,146,579	-		PFLU_RS22865	0.67	+1.2
5,146,579	-		PFLU_RS22865	0.67	-0.1
5,146,579	-		PFLU_RS22865	0.67	+1.5
5,146,579	-		PFLU_RS22865	0.67	+0.9
5,146,579	-		PFLU_RS22865	0.67	-1.1
5,146,579	-		PFLU_RS22865	0.67	+0.7
5,146,579	-		PFLU_RS22865	0.67	-0.9
5,146,581	+		PFLU_RS22865	0.67	+1.0
5,146,581	+		PFLU_RS22865	0.67	+1.0
5,146,581	+		PFLU_RS22865	0.67	-1.6
5,146,581	+		PFLU_RS22865	0.67	+0.0
5,146,581	+		PFLU_RS22865	0.67	-0.0
5,146,581	+		PFLU_RS22865	0.67	+0.0
5,146,581	+		PFLU_RS22865	0.67	-0.5
5,146,581	+		PFLU_RS22865	0.67	-0.5
5,146,581	+		PFLU_RS22865	0.67	-0.0
5,146,581	+		PFLU_RS22865	0.67	-0.6
5,146,581	+		PFLU_RS22865	0.67	-0.2
5,146,581	+		PFLU_RS22865	0.67	+0.5
5,146,581	+		PFLU_RS22865	0.67	+0.6
5,146,581	+		PFLU_RS22865	0.67	+0.3
5,146,581	+		PFLU_RS22865	0.67	+0.6
5,146,581	+		PFLU_RS22865	0.67	+1.9
5,146,581	+		PFLU_RS22865	0.67	+0.7
5,146,582	-		PFLU_RS22865	0.67	-1.3
5,146,582	-		PFLU_RS22865	0.67	-0.1
5,146,582	-		PFLU_RS22865	0.67	+1.7
5,146,582	-		PFLU_RS22865	0.67	-1.1
5,146,582	-		PFLU_RS22865	0.67	-1.2
5,146,582	-		PFLU_RS22865	0.67	-1.5
5,146,582	-		PFLU_RS22865	0.67	-0.3
5,146,582	-		PFLU_RS22865	0.67	+1.7
5,146,629	+		PFLU_RS22865	0.71	-0.2
5,146,629	+		PFLU_RS22865	0.71	+0.3
5,146,629	+		PFLU_RS22865	0.71	+0.3
5,146,630	-		PFLU_RS22865	0.71	+0.4
5,146,671	+		PFLU_RS22865	0.74	+0.3
5,146,672	-		PFLU_RS22865	0.74	+0.4
5,146,737	+		PFLU_RS22865	0.78	+0.7
5,146,737	+		PFLU_RS22865	0.78	-0.2
5,146,737	+		PFLU_RS22865	0.78	+0.0
5,146,737	+		PFLU_RS22865	0.78	-1.1
5,146,737	+		PFLU_RS22865	0.78	-0.3
5,146,738	-		PFLU_RS22865	0.78	+0.5
5,146,738	-		PFLU_RS22865	0.78	-0.5
5,146,738	-		PFLU_RS22865	0.78	+0.0
5,146,756	+		PFLU_RS22865	0.80	+1.5
5,146,756	+		PFLU_RS22865	0.80	-0.7
5,146,756	+		PFLU_RS22865	0.80	+0.3
5,146,756	+		PFLU_RS22865	0.80	-0.3
5,146,756	+		PFLU_RS22865	0.80	+0.3
5,146,756	+		PFLU_RS22865	0.80	+0.2
5,146,756	+		PFLU_RS22865	0.80	+2.1
5,146,756	+		PFLU_RS22865	0.80	+1.7
5,146,756	+		PFLU_RS22865	0.80	-0.9
5,146,756	+		PFLU_RS22865	0.80	-1.3
5,146,756	+		PFLU_RS22865	0.80	-1.5
5,146,756	+		PFLU_RS22865	0.80	+0.3
5,146,756	+		PFLU_RS22865	0.80	+0.1
5,146,756	+		PFLU_RS22865	0.80	+0.2
5,146,756	+		PFLU_RS22865	0.80	+1.4
5,146,757	-		PFLU_RS22865	0.80	-0.0
5,146,757	-		PFLU_RS22865	0.80	+0.7
5,146,757	-		PFLU_RS22865	0.80	+0.6
5,146,757	-		PFLU_RS22865	0.80	-1.5
5,146,757	-		PFLU_RS22865	0.80	-1.5
5,146,757	-		PFLU_RS22865	0.80	-0.2
5,146,757	-		PFLU_RS22865	0.80	+1.7
5,146,757	-		PFLU_RS22865	0.80	-0.4
5,146,757	-		PFLU_RS22865	0.80	+0.7
5,146,757	-		PFLU_RS22865	0.80	+1.7
5,146,757	-		PFLU_RS22865	0.80	-0.1
5,146,757	-		PFLU_RS22865	0.80	-0.1
5,146,757	-		PFLU_RS22865	0.80	-0.3
5,146,759	+		PFLU_RS22865	0.80	-0.4
5,146,759	+		PFLU_RS22865	0.80	-0.7
5,146,759	+		PFLU_RS22865	0.80	+0.3
5,146,759	+		PFLU_RS22865	0.80	-1.2
5,146,760	-		PFLU_RS22865	0.80	+0.1
5,146,760	-		PFLU_RS22865	0.80	-0.1
5,146,760	-		PFLU_RS22865	0.80	+1.0
5,146,760	-		PFLU_RS22865	0.80	-0.6
5,146,760	-		PFLU_RS22865	0.80	+0.6
5,146,760	-		PFLU_RS22865	0.80	+3.3
5,146,875	+		PFLU_RS22865	0.88	-0.5
5,147,013	+				+0.4
5,147,013	+				+0.8
5,147,013	+				+0.6
5,147,013	+				+0.2
5,147,013	+				-1.1
5,147,013	+				+0.1
5,147,013	+				+1.2
5,147,014	-				+0.4
5,147,014	-				+0.2
5,147,014	-				+0.1
5,147,014	-				-1.3
5,147,014	-				+2.0
5,147,014	-				+1.0
5,147,014	-				-0.2
5,147,014	-				+0.1
5,147,014	-				+0.8
5,147,014	-				-1.8
5,147,014	-				-0.7
5,147,014	-				+0.6
5,147,025	+				+1.3
5,147,025	+				+0.0
5,147,025	+				+1.3
5,147,026	-				+1.4
5,147,026	-				+1.6
5,147,026	-				+0.1
5,147,028	+				+0.7
5,147,028	+				+0.3
5,147,028	+				+1.1
5,147,028	+				+1.0
5,147,028	+				-1.1
5,147,028	+				+0.7
5,147,028	+				-0.9
5,147,029	-				+1.1
5,147,029	-				-0.9
5,147,029	-				+0.2
5,147,029	-				+0.2
5,147,029	-				-0.2
5,147,029	-				+0.1
5,147,029	-				-0.6
5,147,029	-				+0.2
5,147,098	+				+0.8
5,147,210	+				+0.1
5,147,221	+				+0.5
5,147,221	+				+0.1
5,147,293	+				+0.1
5,147,293	+				-1.1
5,147,368	+				+0.4
5,147,368	+				-0.7
5,147,369	-				+1.2
5,147,369	-				-1.7
5,147,369	-				+2.2
5,147,381	+				+0.6
5,147,446	+				-0.3
5,147,446	+				+0.7
5,147,446	+				+2.3
5,147,446	+				+0.2
5,147,446	+				+0.4
5,147,446	+				-0.7
5,147,447	-				+0.1
5,147,447	-				-0.1
5,147,452	+				+0.5
5,147,452	+				+0.0
5,147,452	+				-0.3
5,147,453	-				-0.3
5,147,453	-				-0.8
5,147,453	-				+1.3
5,147,453	-				+0.7
5,147,453	-				-0.3
5,147,453	-				-0.5
5,147,453	-				-0.5
5,147,459	+				-0.9
5,147,459	+				+0.6
5,147,459	+				+0.4
5,147,459	+				+0.1
5,147,459	+				+0.5
5,147,459	+				+0.1
5,147,459	+				+1.3
5,147,460	-				-3.4
5,147,460	-				+0.0
5,147,460	-				-1.2
5,147,460	-				-1.5
5,147,460	-				+0.7
5,147,460	-				-1.3
5,147,460	-				+1.4
5,147,460	-				+0.3
5,147,460	-				+0.5
5,147,460	-				+0.9
5,147,460	-				+0.2
5,147,460	-				-0.4
5,147,460	-				+1.0
5,147,468	-				-0.3
5,147,557	+		PFLU_RS22870	0.29	-0.3
5,147,557	+		PFLU_RS22870	0.29	+1.0
5,147,557	+		PFLU_RS22870	0.29	-1.7
5,147,557	+		PFLU_RS22870	0.29	+2.7
5,147,557	+		PFLU_RS22870	0.29	-0.3
5,147,557	+		PFLU_RS22870	0.29	+4.0
5,147,558	-		PFLU_RS22870	0.29	+0.5
5,147,558	-		PFLU_RS22870	0.29	+1.4
5,147,558	-		PFLU_RS22870	0.29	-0.6
5,147,567	+		PFLU_RS22870	0.32	+2.0
5,147,567	+		PFLU_RS22870	0.32	+0.3
5,147,567	+		PFLU_RS22870	0.32	+1.3
5,147,567	+		PFLU_RS22870	0.32	-0.5
5,147,567	+		PFLU_RS22870	0.32	+0.1
5,147,568	-		PFLU_RS22870	0.32	+0.1
5,147,571	+		PFLU_RS22870	0.33	+0.1
5,147,571	+		PFLU_RS22870	0.33	+0.7
5,147,600	+		PFLU_RS22870	0.42	+1.8
5,147,702	+		PFLU_RS22870	0.71	+1.2
5,147,703	-		PFLU_RS22870	0.72	-0.4
5,147,703	-		PFLU_RS22870	0.72	+0.9
5,147,786	+				-0.8
5,147,786	+				+0.4
5,147,787	-				-0.2
5,147,787	-				-1.0
5,147,825	+				-0.1
5,147,826	-				+1.0
5,147,826	-				-1.1
5,147,826	-				+1.7
5,147,857	+				+0.5
5,147,857	+				-0.4
5,147,873	-				+0.5
5,147,880	+				-0.2
5,147,880	+				-0.3
5,147,880	+				+0.8
5,147,880	+				+1.0
5,147,881	-				+0.4
5,147,881	-				-0.7
5,147,907	+				+0.6
5,147,907	+				+1.7
5,147,907	+				-0.1
5,147,907	+				+1.0
5,147,907	+				-1.0
5,147,907	+				-0.6
5,147,907	+				+1.2
5,147,907	+				+0.6
5,147,907	+				+0.0
5,147,907	+				+0.2
5,147,907	+				+0.2
5,147,908	-				+3.3
5,147,908	-				-1.3
5,147,908	-				-1.5
5,147,908	-				+0.6
5,147,908	-				+0.7
5,147,908	-				-0.4
5,147,908	-				+0.4
5,147,927	+				+0.7
5,147,959	+				+1.0
5,147,959	+				-1.5
5,147,960	-				+0.7
5,147,970	+				+1.9
5,147,970	+				+0.7
5,147,970	+				+1.4
5,147,971	-				-0.1
5,147,971	-				+0.4
5,147,971	-				-1.6
5,147,971	-				+0.1
5,147,971	-				+0.8
5,147,971	-				+2.3
5,147,971	-				+0.8
5,147,971	-				-0.0
5,147,971	-				+0.3
5,147,971	-				-1.1
5,147,971	-				-2.0
5,147,971	-				-0.4
5,147,971	-				+0.9
5,147,971	-				-1.3
5,147,971	-				+1.0
5,147,971	-				+0.3
5,147,971	-				+1.7
5,147,993	+				+0.9
5,147,993	+				-0.4
5,147,994	-				-0.4
5,148,010	+				-1.5
5,148,010	+				-2.4
5,148,045	+		PFLU_RS22875	0.14	-0.7
5,148,046	-		PFLU_RS22875	0.14	-0.7
5,148,075	+		PFLU_RS22875	0.26	-1.5
5,148,075	+		PFLU_RS22875	0.26	-0.0
5,148,075	+		PFLU_RS22875	0.26	+0.6
5,148,076	-		PFLU_RS22875	0.27	+0.8
5,148,076	-		PFLU_RS22875	0.27	+0.1
5,148,076	-		PFLU_RS22875	0.27	-0.1
5,148,231	+				-0.7
5,148,231	+				-0.8
5,148,231	+				-0.8
5,148,232	-				+0.4
5,148,265	-				+1.1
5,148,265	-				-0.0
5,148,283	+				-0.1
5,148,283	+				+0.2
5,148,283	+				-0.4
5,148,283	+				-0.5
5,148,283	+				+0.2
5,148,284	+				-0.6
5,148,284	-				-0.7
5,148,284	-				+1.3
5,148,284	-				-0.8
5,148,284	-				-0.5
5,148,284	-				+1.2
5,148,284	-				+0.6
5,148,289	+				-0.8
5,148,289	+				-0.1
5,148,289	+				+0.0
5,148,289	+				-0.9
5,148,290	-				+1.1
5,148,290	-				+0.1
5,148,290	-				-0.8
5,148,465	+		PFLU_RS22880	0.18	+1.4
5,148,465	+		PFLU_RS22880	0.18	-0.7
5,148,465	+		PFLU_RS22880	0.18	-0.5
5,148,465	+		PFLU_RS22880	0.18	+0.3
5,148,465	+		PFLU_RS22880	0.18	-0.1
5,148,465	+		PFLU_RS22880	0.18	+0.9
5,148,465	+		PFLU_RS22880	0.18	-0.4
5,148,465	+		PFLU_RS22880	0.18	+0.2
5,148,466	-		PFLU_RS22880	0.19	-0.3
5,148,466	-		PFLU_RS22880	0.19	-0.9
5,148,466	-		PFLU_RS22880	0.19	-0.3
5,148,466	-		PFLU_RS22880	0.19	+0.2
5,148,518	+		PFLU_RS22880	0.27	+0.2
5,148,518	+		PFLU_RS22880	0.27	-0.6
5,148,518	+		PFLU_RS22880	0.27	+1.0
5,148,519	-		PFLU_RS22880	0.27	+0.2
5,148,533	+		PFLU_RS22880	0.30	-0.5
5,148,534	-		PFLU_RS22880	0.30	-0.3
5,148,559	-		PFLU_RS22880	0.34	-0.3
5,148,559	-		PFLU_RS22880	0.34	-0.8
5,148,559	-		PFLU_RS22880	0.34	-1.1
5,148,559	-		PFLU_RS22880	0.34	-0.2
5,148,672	+		PFLU_RS22880	0.53	+1.1
5,148,672	+		PFLU_RS22880	0.53	+0.1
5,148,672	+		PFLU_RS22880	0.53	+0.4
5,148,672	+		PFLU_RS22880	0.53	-0.1
5,148,672	+		PFLU_RS22880	0.53	-2.0
5,148,672	+		PFLU_RS22880	0.53	-0.7
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