Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21785

Experiment: 4-Hydroxybenzoic Acid (C) 1.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid (C) 1.5 mM
4,903,425	+		PFLU_RS21775	0.82	+1.6
4,903,425	+		PFLU_RS21775	0.82	+0.0
4,903,425	+		PFLU_RS21775	0.82	-0.7
4,903,425	+		PFLU_RS21775	0.82	+1.2
4,903,426	-		PFLU_RS21775	0.83	+0.2
4,903,426	-		PFLU_RS21775	0.83	+0.7
4,903,426	-		PFLU_RS21775	0.83	+0.8
4,903,426	-		PFLU_RS21775	0.83	+1.7
4,903,426	-		PFLU_RS21775	0.83	+0.9
4,903,426	-		PFLU_RS21775	0.83	+0.6
4,903,426	-		PFLU_RS21775	0.83	+0.9
4,903,474	+		PFLU_RS21775	0.85	+0.0
4,903,474	+		PFLU_RS21775	0.85	+1.9
4,903,475	-		PFLU_RS21775	0.85	+0.8
4,903,475	-		PFLU_RS21775	0.85	-0.2
4,903,540	+		PFLU_RS21775	0.89	+0.5
4,903,540	+		PFLU_RS21775	0.89	+0.4
4,903,540	+		PFLU_RS21775	0.89	+1.6
4,903,540	+		PFLU_RS21775	0.89	+1.4
4,903,541	-		PFLU_RS21775	0.89	-0.1
4,903,541	-		PFLU_RS21775	0.89	+0.7
4,903,541	-		PFLU_RS21775	0.89	-0.2
4,903,541	-		PFLU_RS21775	0.89	+1.0
4,903,541	-		PFLU_RS21775	0.89	+0.8
4,903,541	-		PFLU_RS21775	0.89	+0.3
4,903,541	-		PFLU_RS21775	0.89	+1.8
4,903,541	-		PFLU_RS21775	0.89	+0.6
4,903,541	-		PFLU_RS21775	0.89	+0.6
4,903,741	+				+0.6
4,903,741	+				+1.4
4,903,741	+				-0.2
4,903,741	+				+0.7
4,903,742	-				-0.7
4,903,742	-				+0.5
4,903,742	-				+0.7
4,903,742	-				+0.9
4,903,742	-				+1.1
4,903,742	-				+0.9
4,903,754	+				+1.0
4,903,755	-				+0.8
4,903,781	+				-0.4
4,903,781	+				+1.8
4,903,781	+				+0.1
4,903,782	-				+0.3
4,903,800	+		PFLU_RS21780	0.14	+0.0
4,903,800	+		PFLU_RS21780	0.14	+2.2
4,903,800	+		PFLU_RS21780	0.14	+0.4
4,903,800	+		PFLU_RS21780	0.14	+1.4
4,903,800	+		PFLU_RS21780	0.14	+1.6
4,903,801	-		PFLU_RS21780	0.15	+0.7
4,903,801	-		PFLU_RS21780	0.15	+0.0
4,903,801	-		PFLU_RS21780	0.15	+1.0
4,903,801	-		PFLU_RS21780	0.15	+0.8
4,903,864	-		PFLU_RS21780	0.34	+2.2
4,904,044	-		PFLU_RS21780	0.88	+0.4
4,904,121	+				+3.6
4,904,121	+				+1.1
4,904,122	-				-1.3
4,904,132	+				+1.4
4,904,132	+				+1.6
4,904,132	+				-0.2
4,904,132	+				+0.9
4,904,132	+				+0.0
4,904,132	+				+2.9
4,904,132	+				+0.1
4,904,133	-				+0.5
4,904,133	-				-1.2
4,904,133	-				-0.4
4,904,135	+				+0.4
4,904,143	+				-0.8
4,904,143	+				+1.4
4,904,143	+				-0.0
4,904,143	+				+0.8
4,904,143	+				+1.0
4,904,144	-				-0.7
4,904,144	-				-1.3
4,904,144	-				-1.5
4,904,144	-				-0.3
4,904,215	+				-1.1
4,904,215	+				-0.2
4,904,215	+				+0.5
4,904,215	+				-0.0
4,904,215	+				-1.3
4,904,215	+				+0.7
4,904,215	+				+0.4
4,904,215	+				+0.1
4,904,216	-				+2.6
4,904,216	-				-0.2
4,904,216	-				-0.7
4,904,216	-				-0.4
4,904,216	-				-0.6
4,904,216	-				+0.6
4,904,216	-				-1.4
4,904,216	-				+0.2
4,904,230	+				-0.2
4,904,230	+				+0.2
4,904,230	+				+1.8
4,904,230	+				+0.3
4,904,230	+				-0.7
4,904,230	+				+0.0
4,904,231	-				+0.5
4,904,231	-				+0.6
4,904,276	-				+0.8
4,904,276	-				+0.0
4,904,569	+		PFLU_RS21785	0.26	+1.4
4,904,570	-		PFLU_RS21785	0.26	+0.6
4,904,726	-		PFLU_RS21785	0.37	+1.0
4,905,082	+		PFLU_RS21785	0.63	-0.0
4,905,082	+		PFLU_RS21785	0.63	+1.3
4,905,082	+		PFLU_RS21785	0.63	+0.5
4,905,082	+		PFLU_RS21785	0.63	-1.5
4,905,082	+		PFLU_RS21785	0.63	+1.4
4,905,082	+		PFLU_RS21785	0.63	+0.6
4,905,082	+		PFLU_RS21785	0.63	-0.4
4,905,082	+		PFLU_RS21785	0.63	+0.5
4,905,082	+		PFLU_RS21785	0.63	+0.7
4,905,083	-		PFLU_RS21785	0.63	-1.3
4,905,083	-		PFLU_RS21785	0.63	+0.2
4,905,083	-		PFLU_RS21785	0.63	-0.6
4,905,269	+		PFLU_RS21785	0.77	+1.6
4,905,269	+		PFLU_RS21785	0.77	-0.5
4,905,270	-		PFLU_RS21785	0.77	+1.5
4,905,270	-		PFLU_RS21785	0.77	+0.7
4,905,292	+		PFLU_RS21785	0.78	-0.7
4,905,293	-		PFLU_RS21785	0.78	-0.3
4,905,429	+		PFLU_RS21785	0.88	+0.1
4,905,429	+		PFLU_RS21785	0.88	+0.3
4,905,429	+		PFLU_RS21785	0.88	+1.4
4,905,429	+		PFLU_RS21785	0.88	+0.5
4,905,429	+		PFLU_RS21785	0.88	+0.3
4,905,429	+		PFLU_RS21785	0.88	+0.4
4,905,429	+		PFLU_RS21785	0.88	+0.6
4,905,429	+		PFLU_RS21785	0.88	-0.0
4,905,429	+		PFLU_RS21785	0.88	+0.4
4,905,429	+		PFLU_RS21785	0.88	+1.3
4,905,429	+		PFLU_RS21785	0.88	-0.0
4,905,429	+		PFLU_RS21785	0.88	+0.9
4,905,429	+		PFLU_RS21785	0.88	-0.1
4,905,429	+		PFLU_RS21785	0.88	+0.6
4,905,429	+		PFLU_RS21785	0.88	+1.0
4,905,429	+		PFLU_RS21785	0.88	+1.6
4,905,429	+		PFLU_RS21785	0.88	+1.5
4,905,429	+		PFLU_RS21785	0.88	-0.4
4,905,429	+		PFLU_RS21785	0.88	-0.7
4,905,429	+		PFLU_RS21785	0.88	+0.0
4,905,429	+		PFLU_RS21785	0.88	+0.7
4,905,429	+		PFLU_RS21785	0.88	+0.5
4,905,429	+		PFLU_RS21785	0.88	-0.8
4,905,430	-		PFLU_RS21785	0.88	-0.4
4,905,430	-		PFLU_RS21785	0.88	+2.3
4,905,430	-		PFLU_RS21785	0.88	-0.1
4,905,430	-		PFLU_RS21785	0.88	+0.1
4,905,430	-		PFLU_RS21785	0.88	-0.9
4,905,430	-		PFLU_RS21785	0.88	+0.5
4,905,430	-		PFLU_RS21785	0.88	+0.2
4,905,430	-		PFLU_RS21785	0.88	+0.0
4,905,430	-		PFLU_RS21785	0.88	+0.2
4,905,430	-		PFLU_RS21785	0.88	-1.6
4,905,430	-		PFLU_RS21785	0.88	+1.1
4,905,430	-		PFLU_RS21785	0.88	-0.9
4,905,430	-		PFLU_RS21785	0.88	+0.6
4,905,430	-		PFLU_RS21785	0.88	+1.7
4,905,430	-		PFLU_RS21785	0.88	-0.3
4,905,430	-		PFLU_RS21785	0.88	+1.6
4,905,430	-		PFLU_RS21785	0.88	+1.7
4,905,430	-		PFLU_RS21785	0.88	-0.3
4,905,430	-		PFLU_RS21785	0.88	-0.0
4,905,430	-		PFLU_RS21785	0.88	-0.1
4,905,430	-		PFLU_RS21785	0.88	+0.8
4,905,430	-		PFLU_RS21785	0.88	-0.3
4,905,430	-		PFLU_RS21785	0.88	+0.1
4,905,430	-		PFLU_RS21785	0.88	+0.1
4,905,430	-		PFLU_RS21785	0.88	+1.3
4,905,430	-		PFLU_RS21785	0.88	+0.6
4,905,573	+				+0.2
4,905,573	+				+0.4
4,905,573	+				-0.2
4,905,573	+				+0.5
4,905,573	+				+0.4
4,905,574	-				-0.4
4,905,574	-				-1.3
4,905,574	-				+1.6
4,905,574	-				+0.0
4,905,574	-				+0.9
4,905,574	-				+0.0
4,905,574	-				-0.9
4,905,574	-				+1.9
4,905,574	-				+1.3
4,905,574	-				+0.3
4,905,574	-				+1.7
4,905,574	-				-0.3
4,905,585	-				+0.6
4,905,585	-				+0.6
4,905,599	+				+1.1
4,905,599	+				+1.0
4,905,600	-				-0.4
4,905,600	-				+2.1
4,905,845	+		PFLU_RS21790	0.20	+0.5
4,905,845	+		PFLU_RS21790	0.20	-0.6
4,905,845	+		PFLU_RS21790	0.20	+0.4
4,905,845	+		PFLU_RS21790	0.20	-1.6
4,905,846	-		PFLU_RS21790	0.20	+0.6
4,905,846	-		PFLU_RS21790	0.20	+1.5
4,905,846	-		PFLU_RS21790	0.20	+0.8
4,905,846	-		PFLU_RS21790	0.20	-0.4
4,905,846	-		PFLU_RS21790	0.20	+1.0
4,905,846	-		PFLU_RS21790	0.20	+0.7
4,905,846	-		PFLU_RS21790	0.20	+2.0
4,906,190	+		PFLU_RS21790	0.49	-0.3
4,906,190	+		PFLU_RS21790	0.49	-0.1
4,906,190	+		PFLU_RS21790	0.49	-0.0
4,906,190	+		PFLU_RS21790	0.49	+0.7
4,906,190	+		PFLU_RS21790	0.49	+0.1
4,906,190	+		PFLU_RS21790	0.49	+0.8
4,906,190	+		PFLU_RS21790	0.49	-2.4
4,906,190	+		PFLU_RS21790	0.49	+1.3
4,906,190	+		PFLU_RS21790	0.49	+0.6
4,906,190	+		PFLU_RS21790	0.49	-0.6
4,906,191	-		PFLU_RS21790	0.49	+1.3
4,906,191	-		PFLU_RS21790	0.49	-0.1
4,906,191	-		PFLU_RS21790	0.49	-0.3
4,906,191	-		PFLU_RS21790	0.49	-0.0
4,906,191	-		PFLU_RS21790	0.49	-0.3
4,906,191	-		PFLU_RS21790	0.49	-0.2
4,906,191	-		PFLU_RS21790	0.49	+0.1
4,906,191	-		PFLU_RS21790	0.49	+0.2
4,906,191	-		PFLU_RS21790	0.49	+0.1
4,906,191	-		PFLU_RS21790	0.49	+1.1
4,906,191	-		PFLU_RS21790	0.49	+1.3
4,906,191	-		PFLU_RS21790	0.49	-0.3