Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS18820

Experiment: 4-Hydroxybenzoic Acid (C) 1.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid (C) 1.5 mM
4,254,232	+		PFLU_RS18815	0.36	-0.5
4,254,232	+		PFLU_RS18815	0.36	-1.0
4,254,232	+		PFLU_RS18815	0.36	+1.5
4,254,232	+		PFLU_RS18815	0.36	+1.4
4,254,233	-		PFLU_RS18815	0.36	-0.3
4,254,233	-		PFLU_RS18815	0.36	+0.7
4,254,241	+		PFLU_RS18815	0.37	-0.1
4,254,241	+		PFLU_RS18815	0.37	-1.4
4,254,242	-		PFLU_RS18815	0.37	-0.1
4,254,242	-		PFLU_RS18815	0.37	-0.9
4,254,242	-		PFLU_RS18815	0.37	+0.8
4,254,250	+		PFLU_RS18815	0.38	-0.3
4,254,250	+		PFLU_RS18815	0.38	-0.5
4,254,251	-		PFLU_RS18815	0.38	+0.6
4,254,251	-		PFLU_RS18815	0.38	+0.7
4,254,251	-		PFLU_RS18815	0.38	-0.3
4,254,251	-		PFLU_RS18815	0.38	-0.0
4,254,414	+		PFLU_RS18815	0.49	-0.5
4,254,414	+		PFLU_RS18815	0.49	-1.3
4,254,415	-		PFLU_RS18815	0.49	-0.5
4,254,415	-		PFLU_RS18815	0.49	+0.0
4,254,473	-		PFLU_RS18815	0.53	-0.5
4,254,473	-		PFLU_RS18815	0.53	+0.4
4,254,473	-		PFLU_RS18815	0.53	-1.3
4,254,640	+		PFLU_RS18815	0.65	-0.9
4,254,641	-		PFLU_RS18815	0.65	-0.5
4,254,641	-		PFLU_RS18815	0.65	-0.8
4,254,655	+		PFLU_RS18815	0.66	-0.1
4,254,655	+		PFLU_RS18815	0.66	+1.0
4,254,655	+		PFLU_RS18815	0.66	-0.2
4,254,655	+		PFLU_RS18815	0.66	+1.5
4,254,656	-		PFLU_RS18815	0.66	+0.5
4,254,656	-		PFLU_RS18815	0.66	+0.4
4,254,667	+		PFLU_RS18815	0.67	-1.0
4,254,733	+		PFLU_RS18815	0.71	-0.0
4,254,734	-		PFLU_RS18815	0.71	-0.0
4,254,734	-		PFLU_RS18815	0.71	-0.2
4,254,734	-		PFLU_RS18815	0.71	+0.2
4,254,734	-		PFLU_RS18815	0.71	-1.0
4,254,949	+		PFLU_RS18815	0.86	-0.7
4,254,950	-		PFLU_RS18815	0.86	+1.3
4,254,950	-		PFLU_RS18815	0.86	-0.0
4,254,950	-		PFLU_RS18815	0.86	-0.5
4,254,950	-		PFLU_RS18815	0.86	-0.8
4,254,950	-		PFLU_RS18815	0.86	-1.2
4,254,958	+		PFLU_RS18815	0.87	-0.8
4,254,958	+		PFLU_RS18815	0.87	+0.1
4,254,958	+		PFLU_RS18815	0.87	+0.7
4,254,958	+		PFLU_RS18815	0.87	+0.5
4,254,958	+		PFLU_RS18815	0.87	-1.0
4,254,958	+		PFLU_RS18815	0.87	-0.5
4,254,958	+		PFLU_RS18815	0.87	+0.2
4,254,958	+		PFLU_RS18815	0.87	+0.6
4,254,958	+		PFLU_RS18815	0.87	+0.1
4,254,958	+		PFLU_RS18815	0.87	-0.0
4,254,958	+		PFLU_RS18815	0.87	-0.6
4,254,958	+		PFLU_RS18815	0.87	+0.2
4,254,958	+		PFLU_RS18815	0.87	+0.1
4,254,959	-		PFLU_RS18815	0.87	-0.6
4,254,959	-		PFLU_RS18815	0.87	-0.0
4,254,959	-		PFLU_RS18815	0.87	-2.0
4,254,959	-		PFLU_RS18815	0.87	-0.5
4,254,959	-		PFLU_RS18815	0.87	-0.3
4,254,959	-		PFLU_RS18815	0.87	+0.1
4,254,959	-		PFLU_RS18815	0.87	+0.1
4,254,959	-		PFLU_RS18815	0.87	-0.0
4,254,959	-		PFLU_RS18815	0.87	-0.2
4,254,959	-		PFLU_RS18815	0.87	+0.2
4,254,959	-		PFLU_RS18815	0.87	+0.3
4,255,033	+				+0.6
4,255,033	+				+1.9
4,255,048	+				+0.5
4,255,048	+				-0.8
4,255,048	+				+0.8
4,255,049	-				-0.7
4,255,049	-				-0.8
4,255,049	-				+0.8
4,255,049	-				-0.5
4,255,049	-				-0.0
4,255,049	-				+0.2
4,255,167	+				-0.1
4,255,167	+				+1.8
4,255,167	+				+0.3
4,255,167	+				+0.6
4,255,167	+				-0.1
4,255,167	+				-0.1
4,255,167	+				+0.5
4,255,167	+				-0.5
4,255,167	+				+1.0
4,255,167	+				-0.4
4,255,167	+				+1.1
4,255,167	+				+0.5
4,255,167	+				-2.5
4,255,167	+				+0.1
4,255,167	+				-1.1
4,255,167	+				-0.8
4,255,168	-				+0.2
4,255,168	-				+0.3
4,255,168	-				-1.1
4,255,168	-				+0.3
4,255,168	-				+1.0
4,255,168	-				+1.5
4,255,168	-				-0.8
4,255,168	-				+0.2
4,255,168	-				-3.3
4,255,168	-				+2.4
4,255,168	-				+1.5
4,255,168	-				+1.1
4,255,171	+				-2.5
4,255,398	+		PFLU_RS18820	0.77	+0.1
4,255,398	+		PFLU_RS18820	0.77	+0.3
4,255,399	-		PFLU_RS18820	0.78	-0.9
4,255,399	-		PFLU_RS18820	0.78	+1.1
4,255,399	-		PFLU_RS18820	0.78	+1.4
4,255,399	-		PFLU_RS18820	0.78	+0.4
4,255,476	+				+0.1
4,255,476	+				+1.0
4,255,546	+				-1.0
4,255,547	-				-1.3
4,255,547	-				+1.7
4,255,547	-				+1.3
4,255,580	+				-1.2
4,255,581	-				+0.3
4,255,610	+		PFLU_RS18825	0.10	+1.1
4,255,610	+		PFLU_RS18825	0.10	-0.8
4,255,610	+		PFLU_RS18825	0.10	+0.3
4,255,611	-		PFLU_RS18825	0.11	-1.3
4,255,611	-		PFLU_RS18825	0.11	+1.5
4,255,611	-		PFLU_RS18825	0.11	-0.5
4,255,611	-		PFLU_RS18825	0.11	-0.1
4,255,611	-		PFLU_RS18825	0.11	-0.4
4,255,611	-		PFLU_RS18825	0.11	+0.7
4,255,901	-		PFLU_RS18825	0.35	-0.7
4,255,901	-		PFLU_RS18825	0.35	+0.3
4,255,901	-		PFLU_RS18825	0.35	+1.2
4,255,901	-		PFLU_RS18825	0.35	-1.0
4,256,037	+		PFLU_RS18825	0.46	+0.9
4,256,174	+		PFLU_RS18825	0.58	+0.7
4,256,209	+		PFLU_RS18825	0.60	-0.6
4,256,209	+		PFLU_RS18825	0.60	-0.9
4,256,209	+		PFLU_RS18825	0.60	-0.3
4,256,210	-		PFLU_RS18825	0.61	-1.4
4,256,210	-		PFLU_RS18825	0.61	-1.1
4,256,210	-		PFLU_RS18825	0.61	+0.1
4,256,210	-		PFLU_RS18825	0.61	+0.1
4,256,230	+		PFLU_RS18825	0.62	+1.3
4,256,231	-		PFLU_RS18825	0.62	-1.2
4,256,231	-		PFLU_RS18825	0.62	+1.4
4,256,231	-		PFLU_RS18825	0.62	-0.9
4,256,341	+		PFLU_RS18825	0.72	-1.6
4,256,341	+		PFLU_RS18825	0.72	-1.5
4,256,342	-		PFLU_RS18825	0.72	+0.9
4,256,342	-		PFLU_RS18825	0.72	+0.8
4,256,342	-		PFLU_RS18825	0.72	+0.4
4,256,342	-		PFLU_RS18825	0.72	-0.7
4,256,470	+		PFLU_RS18825	0.82	+0.5
4,256,470	+		PFLU_RS18825	0.82	-1.1
4,256,470	+		PFLU_RS18825	0.82	-0.3
4,256,470	+		PFLU_RS18825	0.82	+0.0
4,256,470	+		PFLU_RS18825	0.82	+0.8
4,256,470	+		PFLU_RS18825	0.82	-1.4
4,256,471	-		PFLU_RS18825	0.82	+1.1
4,256,471	-		PFLU_RS18825	0.82	-0.5
4,256,471	-		PFLU_RS18825	0.82	-0.8
4,256,471	-		PFLU_RS18825	0.82	-1.4
4,256,471	-		PFLU_RS18825	0.82	+0.1
4,256,471	-		PFLU_RS18825	0.82	+0.3
4,256,471	-		PFLU_RS18825	0.82	-2.9
4,256,471	-		PFLU_RS18825	0.82	-0.5
4,256,471	-		PFLU_RS18825	0.82	+0.1