Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS09335

Experiment: 4-Hydroxybenzoic Acid (C) 1.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid (C) 1.5 mM
2,064,176	-				-0.7
2,064,190	-				+0.4
2,064,204	+				+1.6
2,064,204	+				+0.6
2,064,205	-				+0.9
2,064,279	-				-1.4
2,064,279	-				-0.7
2,064,281	-				-0.4
2,064,293	+				-0.1
2,064,306	-				-1.3
2,064,324	+				-1.4
2,064,325	-				+0.6
2,064,355	+				+1.0
2,064,355	+				-1.4
2,064,358	+				-1.2
2,064,358	+				+0.5
2,064,359	-				+1.4
2,064,378	-				-1.0
2,064,378	-				-2.4
2,064,383	+				+0.2
2,064,387	+				+0.0
2,064,436	+		PFLU_RS30555	0.75	+0.6
2,064,436	+		PFLU_RS30555	0.75	+2.0
2,064,436	+		PFLU_RS30555	0.75	+1.1
2,064,437	-		PFLU_RS30555	0.76	-0.8
2,064,453	+				-0.6
2,064,490	+				+0.8
2,064,490	+				-0.4
2,064,491	-				-0.4
2,064,491	-				-0.7
2,064,511	+				+0.3
2,064,512	-				-1.5
2,064,512	-				-0.7
2,064,512	-				+0.2
2,064,568	+				-1.0
2,064,568	+				-1.4
2,064,575	+				-1.5
2,064,575	+				+1.0
2,064,575	+				-0.3
2,064,575	+				+1.2
2,064,576	-				+1.4
2,064,579	+				-0.4
2,064,580	-				-1.5
2,064,588	-				-1.8
2,064,588	-				+1.6
2,064,621	+				+1.6
2,064,630	-				-0.2
2,064,630	-				-1.2
2,064,630	-				+1.0
2,064,633	+				-0.4
2,064,633	+				-0.1
2,064,650	-				+0.5
2,064,689	-		PFLU_RS09330	0.13	+0.0
2,064,703	+		PFLU_RS09330	0.16	-1.7
2,064,703	+		PFLU_RS09330	0.16	+0.5
2,064,704	-		PFLU_RS09330	0.17	+0.2
2,064,704	-		PFLU_RS09330	0.17	+0.4
2,064,720	+		PFLU_RS09330	0.21	+1.0
2,064,720	+		PFLU_RS09330	0.21	+0.0
2,064,738	+		PFLU_RS09330	0.25	+0.2
2,064,738	+		PFLU_RS09330	0.25	+0.3
2,064,738	+		PFLU_RS09330	0.25	+1.3
2,064,738	+		PFLU_RS09330	0.25	+0.2
2,064,739	-		PFLU_RS09330	0.26	-0.2
2,064,739	-		PFLU_RS09330	0.26	+0.5
2,064,739	-		PFLU_RS09330	0.26	-0.3
2,064,780	+		PFLU_RS09330	0.36	+0.9
2,064,780	+		PFLU_RS09330	0.36	+1.2
2,064,780	+		PFLU_RS09330	0.36	-0.1
2,064,781	-		PFLU_RS09330	0.37	-0.1
2,064,885	+		PFLU_RS09330	0.64	+1.6
2,064,885	+		PFLU_RS09330	0.64	-0.6
2,064,886	-		PFLU_RS09330	0.64	-2.5
2,064,886	-		PFLU_RS09330	0.64	+0.7
2,064,908	+		PFLU_RS09330	0.70	-0.1
2,064,908	+		PFLU_RS09330	0.70	+0.3
2,064,909	-		PFLU_RS09330	0.70	-1.4
2,064,914	+		PFLU_RS09330	0.72	+0.9
2,064,914	+		PFLU_RS09330	0.72	-1.4
2,064,914	+		PFLU_RS09330	0.72	-0.5
2,064,974	+		PFLU_RS09330	0.87	-0.8
2,064,974	+		PFLU_RS09330	0.87	+0.0
2,064,974	+		PFLU_RS09330	0.87	+0.7
2,064,974	+		PFLU_RS09330	0.87	+0.8
2,064,974	+		PFLU_RS09330	0.87	-1.5
2,064,975	-		PFLU_RS09330	0.88	-1.1
2,064,975	-		PFLU_RS09330	0.88	-0.1
2,064,975	-		PFLU_RS09330	0.88	+0.2
2,065,021	+				+0.8
2,065,021	+				-0.3
2,065,021	+				-1.7
2,065,021	+				+0.5
2,065,022	-				-2.4
2,065,022	-				-1.5
2,065,022	-				-0.7
2,065,022	-				-0.5
2,065,022	-				-2.8
2,065,025	+				-2.4
2,065,025	+				+0.0
2,065,026	-				-0.6
2,065,026	-				+0.5
2,065,026	-				-0.4
2,065,026	-				-0.7
2,065,074	+				-0.4
2,065,075	-				-0.8
2,065,077	+				-0.8
2,065,077	+				-0.5
2,065,092	+				-1.4
2,065,092	+				-0.2
2,065,113	+				-1.7
2,065,126	+				+3.6
2,065,141	+				+0.3
2,065,141	+				-0.1
2,065,141	+				+0.6
2,065,142	-				+0.2
2,065,142	-				-0.5
2,065,144	+				-0.1
2,065,197	+		PFLU_RS09335	0.28	+0.6
2,065,197	+		PFLU_RS09335	0.28	+1.9
2,065,197	+		PFLU_RS09335	0.28	+1.4
2,065,197	+		PFLU_RS09335	0.28	-0.4
2,065,197	+		PFLU_RS09335	0.28	-1.4
2,065,197	+		PFLU_RS09335	0.28	-1.2
2,065,198	-		PFLU_RS09335	0.28	+0.2
2,065,198	-		PFLU_RS09335	0.28	-0.1
2,065,198	-		PFLU_RS09335	0.28	+1.0
2,065,198	-		PFLU_RS09335	0.28	+1.0
2,065,198	-		PFLU_RS09335	0.28	+0.2
2,065,284	+		PFLU_RS09335	0.72	+0.1
2,065,284	+		PFLU_RS09335	0.72	-0.4
2,065,284	+		PFLU_RS09335	0.72	+1.0
2,065,284	+		PFLU_RS09335	0.72	+1.1
2,065,284	+		PFLU_RS09335	0.72	+0.5
2,065,284	+		PFLU_RS09335	0.72	+0.3
2,065,285	-		PFLU_RS09335	0.73	-0.4
2,065,320	+				+1.2
2,065,320	+				+1.1
2,065,321	-				-0.5
2,065,321	-				-0.3
2,065,321	-				-1.0
2,065,321	-				-0.3
2,065,321	-				+0.2
2,065,321	-				+0.0
2,065,321	-				+0.1
2,065,321	-				+0.6
2,065,355	+				-2.5
2,065,355	+				-0.5
2,065,356	-				-0.4
2,065,356	-				-0.0
2,065,356	-				-1.9
2,065,363	+				-1.3
2,065,363	+				-1.1
2,065,363	+				-1.8
2,065,363	+				-0.7
2,065,364	-				-2.3
2,065,364	-				+0.0
2,065,364	-				-0.7
2,065,364	-				+0.4
2,065,364	-				-0.9
2,065,364	-				-1.2
2,065,364	-				+0.4
2,065,365	+				-1.2
2,065,365	+				+0.7
2,065,365	+				-0.4
2,065,365	+				-0.8
2,065,366	-				+0.3
2,065,366	-				+1.2
2,065,366	-				+0.9
2,065,366	-				+1.4
2,065,366	-				+0.9
2,065,366	-				-1.2
2,065,370	+				-0.4
2,065,378	+				+0.2
2,065,378	+				-0.4
2,065,378	+				+2.9
2,065,378	+				+0.0
2,065,379	-				+0.3
2,065,379	-				-1.5
2,065,379	-				-1.3
2,065,382	+				+0.3
2,065,382	+				-0.1
2,065,382	+				-1.0
2,065,382	+				-1.1
2,065,382	+				+0.6
2,065,383	-				+0.3
2,065,383	-				-0.4
2,065,383	-				+0.3
2,065,383	-				+0.6
2,065,383	-				+0.8
2,065,383	-				+1.7
2,065,386	+				+0.4
2,065,386	+				-1.5
2,065,386	+				+0.0
2,065,386	+				-1.7
2,065,386	+				-0.2
2,065,386	+				+0.8
2,065,386	+				-0.4
2,065,386	+				+1.0
2,065,386	+				-0.2
2,065,386	+				-0.0
2,065,387	-				+1.3
2,065,387	-				+0.0
2,065,387	-				-1.5
2,065,387	-				-1.1
2,065,387	-				-0.4
2,065,387	-				-0.7
2,065,387	-				-0.3
2,065,387	-				+0.2
2,065,387	-				+0.5
2,065,446	+				+0.0
2,065,446	+				+0.9
2,065,446	+				+1.6
2,065,447	-				-0.3
2,065,447	-				-1.0
2,065,447	-				-0.7
2,065,474	+		PFLU_RS09340	0.10	-0.5
2,065,474	+		PFLU_RS09340	0.10	-2.0
2,065,474	+		PFLU_RS09340	0.10	-2.2
2,065,474	+		PFLU_RS09340	0.10	-0.2
2,065,475	-		PFLU_RS09340	0.10	-1.7
2,065,591	-		PFLU_RS09340	0.19	+4.2
2,065,608	+		PFLU_RS09340	0.21	+0.4
2,065,608	+		PFLU_RS09340	0.21	+0.0
2,065,608	+		PFLU_RS09340	0.21	+0.8
2,065,608	+		PFLU_RS09340	0.21	+2.1
2,065,608	+		PFLU_RS09340	0.21	-1.1
2,065,609	-		PFLU_RS09340	0.21	+0.4
2,065,609	-		PFLU_RS09340	0.21	+0.1
2,065,617	-		PFLU_RS09340	0.21	-0.8
2,065,643	+		PFLU_RS09340	0.23	-1.2
2,065,643	+		PFLU_RS09340	0.23	+1.0
2,065,643	+		PFLU_RS09340	0.23	+0.6
2,065,643	+		PFLU_RS09340	0.23	+0.0
2,065,643	+		PFLU_RS09340	0.23	-1.0
2,065,644	-		PFLU_RS09340	0.23	-1.1
2,065,644	-		PFLU_RS09340	0.23	-1.1
2,065,644	-		PFLU_RS09340	0.23	-2.0
2,065,660	+		PFLU_RS09340	0.25	-0.4
2,065,660	+		PFLU_RS09340	0.25	-0.3
2,065,660	+		PFLU_RS09340	0.25	+2.2
2,065,660	+		PFLU_RS09340	0.25	+0.0
2,065,661	-		PFLU_RS09340	0.25	+0.6
2,065,661	-		PFLU_RS09340	0.25	+1.4
2,065,688	+		PFLU_RS09340	0.27	-0.8
2,065,688	+		PFLU_RS09340	0.27	-0.7
2,065,688	+		PFLU_RS09340	0.27	+2.6
2,065,688	+		PFLU_RS09340	0.27	+1.0
2,065,689	-		PFLU_RS09340	0.27	+3.6
2,065,689	-		PFLU_RS09340	0.27	+0.3
2,065,689	-		PFLU_RS09340	0.27	+0.5
2,065,689	-		PFLU_RS09340	0.27	-0.2
2,065,689	-		PFLU_RS09340	0.27	+0.5
2,065,689	-		PFLU_RS09340	0.27	+1.2
2,065,689	-		PFLU_RS09340	0.27	-2.0
2,065,689	-		PFLU_RS09340	0.27	+0.0
2,065,763	+		PFLU_RS09340	0.33	-0.8
2,065,764	-		PFLU_RS09340	0.33	-0.0
2,065,764	-		PFLU_RS09340	0.33	-0.1
2,065,764	-		PFLU_RS09340	0.33	+0.0
2,065,815	+		PFLU_RS09340	0.37	-1.8
2,065,887	+		PFLU_RS09340	0.42	-1.5
2,065,887	+		PFLU_RS09340	0.42	-0.1
2,065,887	+		PFLU_RS09340	0.42	+0.7
2,065,887	+		PFLU_RS09340	0.42	+0.5
2,065,887	+		PFLU_RS09340	0.42	-1.8
2,065,888	-		PFLU_RS09340	0.42	-1.1
2,065,888	-		PFLU_RS09340	0.42	-1.7
2,065,888	-		PFLU_RS09340	0.42	+0.3
2,065,888	-		PFLU_RS09340	0.42	+1.0
2,065,888	-		PFLU_RS09340	0.42	-1.4
2,065,913	+		PFLU_RS09340	0.44	-1.8
2,065,916	+		PFLU_RS09340	0.45	+2.6
2,065,916	+		PFLU_RS09340	0.45	-0.7
2,065,916	+		PFLU_RS09340	0.45	-0.3
2,065,916	+		PFLU_RS09340	0.45	-2.0
2,065,916	+		PFLU_RS09340	0.45	+0.3
2,065,916	+		PFLU_RS09340	0.45	+0.9
2,065,916	+		PFLU_RS09340	0.45	-2.0
2,065,916	+		PFLU_RS09340	0.45	+0.1
2,065,916	+		PFLU_RS09340	0.45	+0.9
2,065,916	+		PFLU_RS09340	0.45	+0.6
2,065,916	+		PFLU_RS09340	0.45	-0.8
2,065,916	+		PFLU_RS09340	0.45	-0.5
2,065,916	+		PFLU_RS09340	0.45	+1.6
2,065,916	+		PFLU_RS09340	0.45	+0.0
2,065,916	+		PFLU_RS09340	0.45	+1.1
2,065,916	+		PFLU_RS09340	0.45	+1.6
2,065,917	-		PFLU_RS09340	0.45	+0.2
2,065,917	-		PFLU_RS09340	0.45	+0.5
2,065,917	-		PFLU_RS09340	0.45	+0.9
2,065,917	-		PFLU_RS09340	0.45	-0.0
2,065,917	-		PFLU_RS09340	0.45	-0.5
2,065,917	-		PFLU_RS09340	0.45	-1.5
2,065,917	-		PFLU_RS09340	0.45	+0.0
2,065,917	-		PFLU_RS09340	0.45	+1.6
2,065,917	-		PFLU_RS09340	0.45	+0.1
2,065,917	-		PFLU_RS09340	0.45	-0.3
2,065,917	-		PFLU_RS09340	0.45	+0.4
2,065,917	-		PFLU_RS09340	0.45	+3.2
2,065,917	-		PFLU_RS09340	0.45	+0.3
2,065,917	-		PFLU_RS09340	0.45	-0.2
2,065,917	-		PFLU_RS09340	0.45	-0.3
2,065,917	-		PFLU_RS09340	0.45	+1.1
2,065,917	-		PFLU_RS09340	0.45	-2.0
2,065,917	-		PFLU_RS09340	0.45	-0.7
2,065,917	-		PFLU_RS09340	0.45	-0.3
2,065,917	-		PFLU_RS09340	0.45	+0.1
2,065,920	+		PFLU_RS09340	0.45	-1.0
2,065,920	+		PFLU_RS09340	0.45	+0.0
2,065,920	+		PFLU_RS09340	0.45	-0.4
2,065,921	-		PFLU_RS09340	0.45	+1.8
2,065,921	-		PFLU_RS09340	0.45	-0.1
2,065,921	-		PFLU_RS09340	0.45	-0.2
2,065,921	-		PFLU_RS09340	0.45	-0.7
2,065,980	+		PFLU_RS09340	0.50	-0.1
2,065,981	-		PFLU_RS09340	0.50	+0.5
2,065,981	-		PFLU_RS09340	0.50	-0.7
2,066,037	-		PFLU_RS09340	0.54	-1.2
2,066,037	-		PFLU_RS09340	0.54	-1.0
2,066,109	-		PFLU_RS09340	0.60	+0.8
2,066,114	+		PFLU_RS09340	0.60	+2.4
2,066,127	+		PFLU_RS09340	0.61	-0.5
2,066,127	+		PFLU_RS09340	0.61	+0.0
2,066,127	+		PFLU_RS09340	0.61	+0.9
2,066,127	+		PFLU_RS09340	0.61	-1.4
2,066,127	+		PFLU_RS09340	0.61	+2.2
2,066,127	+		PFLU_RS09340	0.61	-0.4
2,066,127	+		PFLU_RS09340	0.61	-2.5
2,066,128	-		PFLU_RS09340	0.61	+0.5
2,066,128	-		PFLU_RS09340	0.61	+1.0
2,066,128	-		PFLU_RS09340	0.61	-0.2
2,066,128	-		PFLU_RS09340	0.61	+1.6
2,066,128	-		PFLU_RS09340	0.61	-1.7
2,066,128	-		PFLU_RS09340	0.61	-0.7
2,066,131	+		PFLU_RS09340	0.61	+0.9
2,066,131	+		PFLU_RS09340	0.61	+0.3
2,066,132	-		PFLU_RS09340	0.61	+0.5
2,066,132	-		PFLU_RS09340	0.61	+1.0
2,066,132	-		PFLU_RS09340	0.61	+0.2
2,066,180	+		PFLU_RS09340	0.65	+0.1
2,066,205	+		PFLU_RS09340	0.67	-0.2
2,066,206	-		PFLU_RS09340	0.67	-0.3
2,066,206	-		PFLU_RS09340	0.67	-0.3
2,066,206	-		PFLU_RS09340	0.67	-0.4
2,066,206	-		PFLU_RS09340	0.67	-0.3
2,066,206	-		PFLU_RS09340	0.67	-1.8
2,066,224	+		PFLU_RS09340	0.68	-0.1
2,066,224	+		PFLU_RS09340	0.68	-0.4
2,066,224	+		PFLU_RS09340	0.68	+0.4
2,066,224	+		PFLU_RS09340	0.68	-0.1
2,066,224	+		PFLU_RS09340	0.68	+1.3
2,066,224	+		PFLU_RS09340	0.68	-0.2
2,066,224	+		PFLU_RS09340	0.68	+0.6
2,066,225	-		PFLU_RS09340	0.69	-0.7
2,066,225	-		PFLU_RS09340	0.69	+1.6
2,066,225	-		PFLU_RS09340	0.69	-1.5
2,066,225	-		PFLU_RS09340	0.69	+1.8
2,066,238	+		PFLU_RS09340	0.70	+0.3
2,066,239	-		PFLU_RS09340	0.70	+0.4
2,066,239	-		PFLU_RS09340	0.70	-1.5
2,066,239	-		PFLU_RS09340	0.70	-1.7
2,066,261	+		PFLU_RS09340	0.71	+0.9
2,066,261	+		PFLU_RS09340	0.71	+0.4
2,066,262	-		PFLU_RS09340	0.71	+0.6
2,066,262	-		PFLU_RS09340	0.71	+1.3
2,066,268	+		PFLU_RS09340	0.72	+1.0
2,066,268	+		PFLU_RS09340	0.72	+2.6
2,066,268	+		PFLU_RS09340	0.72	+0.2
2,066,269	-		PFLU_RS09340	0.72	-0.3
2,066,269	-		PFLU_RS09340	0.72	+0.6
2,066,286	+		PFLU_RS09340	0.73	-0.7
2,066,287	-		PFLU_RS09340	0.73	-0.2
2,066,287	-		PFLU_RS09340	0.73	-0.2
2,066,287	-		PFLU_RS09340	0.73	+0.6
2,066,332	+		PFLU_RS09340	0.77	+1.6
2,066,332	+		PFLU_RS09340	0.77	-0.7
2,066,333	-		PFLU_RS09340	0.77	+4.8
2,066,333	-		PFLU_RS09340	0.77	-2.0