Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS05665

Experiment: 4-Hydroxybenzoic Acid (C) 1.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid (C) 1.5 mM
1,277,830	+		PFLU_RS05660	0.39	+0.5
1,277,830	+		PFLU_RS05660	0.39	+1.7
1,277,831	-		PFLU_RS05660	0.40	+2.4
1,277,850	-		PFLU_RS05660	0.41	+1.1
1,277,954	+		PFLU_RS05660	0.48	+0.1
1,277,954	+		PFLU_RS05660	0.48	+0.7
1,277,954	+		PFLU_RS05660	0.48	+1.0
1,277,954	+		PFLU_RS05660	0.48	+1.7
1,277,954	+		PFLU_RS05660	0.48	+2.1
1,277,954	+		PFLU_RS05660	0.48	-0.0
1,277,954	+		PFLU_RS05660	0.48	+0.6
1,277,955	-		PFLU_RS05660	0.48	+0.6
1,277,955	-		PFLU_RS05660	0.48	+1.4
1,277,955	-		PFLU_RS05660	0.48	+0.7
1,277,955	-		PFLU_RS05660	0.48	+1.1
1,277,955	-		PFLU_RS05660	0.48	+2.7
1,277,955	-		PFLU_RS05660	0.48	+1.5
1,278,052	-		PFLU_RS05660	0.54	+0.1
1,278,052	-		PFLU_RS05660	0.54	+0.1
1,278,052	-		PFLU_RS05660	0.54	+1.6
1,278,052	-		PFLU_RS05660	0.54	+0.4
1,278,059	+		PFLU_RS05660	0.55	+0.1
1,278,059	+		PFLU_RS05660	0.55	+2.3
1,278,059	+		PFLU_RS05660	0.55	+0.3
1,278,059	+		PFLU_RS05660	0.55	+1.0
1,278,059	+		PFLU_RS05660	0.55	+1.7
1,278,060	-		PFLU_RS05660	0.55	-0.7
1,278,060	-		PFLU_RS05660	0.55	+1.8
1,278,060	-		PFLU_RS05660	0.55	+0.9
1,278,060	-		PFLU_RS05660	0.55	+1.7
1,278,103	+		PFLU_RS05660	0.58	-0.3
1,278,103	+		PFLU_RS05660	0.58	+3.3
1,278,182	+		PFLU_RS05660	0.63	+2.2
1,278,182	+		PFLU_RS05660	0.63	+0.5
1,278,182	+		PFLU_RS05660	0.63	+2.7
1,278,182	+		PFLU_RS05660	0.63	+1.7
1,278,183	-		PFLU_RS05660	0.63	+0.3
1,278,183	-		PFLU_RS05660	0.63	+1.1
1,278,183	-		PFLU_RS05660	0.63	+3.3
1,278,183	-		PFLU_RS05660	0.63	+1.9
1,278,326	+		PFLU_RS05660	0.72	+1.7
1,278,326	+		PFLU_RS05660	0.72	+1.7
1,278,326	+		PFLU_RS05660	0.72	+1.7
1,278,326	+		PFLU_RS05660	0.72	+1.2
1,278,326	+		PFLU_RS05660	0.72	+1.3
1,278,326	+		PFLU_RS05660	0.72	+2.7
1,278,326	+		PFLU_RS05660	0.72	-0.1
1,278,326	+		PFLU_RS05660	0.72	+1.7
1,278,326	+		PFLU_RS05660	0.72	+0.6
1,278,326	+		PFLU_RS05660	0.72	+1.1
1,278,326	+		PFLU_RS05660	0.72	+1.1
1,278,327	-		PFLU_RS05660	0.72	+0.4
1,278,327	-		PFLU_RS05660	0.72	+2.7
1,278,327	-		PFLU_RS05660	0.72	-0.1
1,278,362	+		PFLU_RS05660	0.75	+0.9
1,278,362	+		PFLU_RS05660	0.75	+0.1
1,278,362	+		PFLU_RS05660	0.75	+2.1
1,278,362	+		PFLU_RS05660	0.75	+1.4
1,278,362	+		PFLU_RS05660	0.75	-0.1
1,278,362	+		PFLU_RS05660	0.75	-1.4
1,278,362	+		PFLU_RS05660	0.75	+3.9
1,278,362	+		PFLU_RS05660	0.75	+1.7
1,278,362	+		PFLU_RS05660	0.75	+1.0
1,278,362	+		PFLU_RS05660	0.75	+0.9
1,278,362	+		PFLU_RS05660	0.75	-0.3
1,278,362	+		PFLU_RS05660	0.75	-1.1
1,278,362	+		PFLU_RS05660	0.75	+2.5
1,278,362	+		PFLU_RS05660	0.75	+4.0
1,278,362	+		PFLU_RS05660	0.75	+1.7
1,278,362	+		PFLU_RS05660	0.75	+1.3
1,278,362	+		PFLU_RS05660	0.75	-0.1
1,278,362	+		PFLU_RS05660	0.75	+3.3
1,278,362	+		PFLU_RS05660	0.75	+0.3
1,278,362	+		PFLU_RS05660	0.75	+1.7
1,278,362	+		PFLU_RS05660	0.75	+0.6
1,278,363	-		PFLU_RS05660	0.75	-0.8
1,278,363	-		PFLU_RS05660	0.75	-0.6
1,278,363	-		PFLU_RS05660	0.75	+4.3
1,278,363	-		PFLU_RS05660	0.75	+2.3
1,278,363	-		PFLU_RS05660	0.75	-0.2
1,278,363	-		PFLU_RS05660	0.75	+1.1
1,278,363	-		PFLU_RS05660	0.75	+0.1
1,278,363	-		PFLU_RS05660	0.75	+0.3
1,278,363	-		PFLU_RS05660	0.75	+2.7
1,278,363	-		PFLU_RS05660	0.75	+3.3
1,278,363	-		PFLU_RS05660	0.75	+0.0
1,278,363	-		PFLU_RS05660	0.75	+2.5
1,278,363	-		PFLU_RS05660	0.75	+0.8
1,278,363	-		PFLU_RS05660	0.75	-0.1
1,278,363	-		PFLU_RS05660	0.75	+0.0
1,278,363	-		PFLU_RS05660	0.75	+0.7
1,278,363	-		PFLU_RS05660	0.75	+0.6
1,278,363	-		PFLU_RS05660	0.75	+0.4
1,278,363	-		PFLU_RS05660	0.75	+0.4
1,278,363	-		PFLU_RS05660	0.75	+2.5
1,278,363	-		PFLU_RS05660	0.75	+0.7
1,278,363	-		PFLU_RS05660	0.75	+0.1
1,278,363	-		PFLU_RS05660	0.75	-0.3
1,278,363	-		PFLU_RS05660	0.75	+0.4
1,278,437	+		PFLU_RS05660	0.80	+1.1
1,278,437	+		PFLU_RS05660	0.80	+1.4
1,278,437	+		PFLU_RS05660	0.80	+2.9
1,278,437	+		PFLU_RS05660	0.80	-1.1
1,278,437	+		PFLU_RS05660	0.80	+1.7
1,278,437	+		PFLU_RS05660	0.80	-0.1
1,278,437	+		PFLU_RS05660	0.80	+0.1
1,278,437	+		PFLU_RS05660	0.80	-0.4
1,278,437	+		PFLU_RS05660	0.80	+1.7
1,278,438	-		PFLU_RS05660	0.80	+0.2
1,278,438	-		PFLU_RS05660	0.80	+1.7
1,278,438	-		PFLU_RS05660	0.80	+1.2
1,278,438	-		PFLU_RS05660	0.80	+0.3
1,278,438	-		PFLU_RS05660	0.80	+2.0
1,278,438	-		PFLU_RS05660	0.80	+0.6
1,278,438	-		PFLU_RS05660	0.80	+1.9
1,278,469	+		PFLU_RS05660	0.82	-0.9
1,278,469	+		PFLU_RS05660	0.82	+0.1
1,278,469	+		PFLU_RS05660	0.82	+1.5
1,278,470	-		PFLU_RS05660	0.82	+3.3
1,278,470	-		PFLU_RS05660	0.82	+0.9
1,278,470	-		PFLU_RS05660	0.82	+2.1
1,278,470	-		PFLU_RS05660	0.82	+0.8
1,278,470	-		PFLU_RS05660	0.82	+0.8
1,278,470	-		PFLU_RS05660	0.82	+0.1
1,278,716	+				+1.7
1,278,716	+				+0.1
1,278,716	+				+1.0
1,278,716	+				+0.1
1,278,716	+				-0.1
1,278,716	+				+0.7
1,278,716	+				-0.9
1,278,716	+				+1.7
1,278,716	+				-0.6
1,278,716	+				+0.7
1,278,716	+				+3.3
1,278,716	+				+0.9
1,278,716	+				-0.3
1,278,716	+				+2.1
1,278,716	+				+2.2
1,278,716	+				+0.1
1,278,716	+				+0.1
1,278,716	+				+1.1
1,278,716	+				-0.3
1,278,716	+				+4.7
1,278,716	+				+1.0
1,278,717	-				+0.7
1,278,717	-				+0.1
1,278,717	-				+3.0
1,278,717	-				-0.9
1,278,717	-				-1.4
1,278,717	-				+0.3
1,278,717	-				+0.1
1,278,717	-				+1.3
1,278,717	-				+0.1
1,278,717	-				+0.5
1,278,717	-				+0.5
1,278,717	-				+1.2
1,278,717	-				+1.7
1,278,717	-				+2.0
1,278,717	-				+0.9
1,278,717	-				+1.6
1,278,717	-				-0.4
1,278,717	-				+1.0
1,278,717	-				+0.7
1,278,717	-				-0.3
1,278,717	-				-0.3
1,278,723	+				-0.1
1,278,723	+				+1.2
1,278,723	+				+0.7
1,278,723	+				+1.4
1,278,724	-				+0.4
1,278,724	-				+1.4
1,278,724	-				+2.1
1,278,724	-				+0.7
1,278,754	-				-0.4
1,278,754	-				-0.2
1,278,764	+				+3.3
1,278,764	+				-0.1
1,278,765	-				+0.2
1,278,765	-				-0.9
1,278,765	-				+0.9
1,278,765	-				-1.4
1,278,772	+				-0.3
1,278,772	+				+1.9
1,278,772	+				+0.6
1,278,772	+				-0.1
1,278,772	+				+0.9
1,278,773	-				-0.3
1,278,773	-				-1.9
1,278,773	-				-0.9
1,278,773	-				-0.6
1,278,773	-				-1.6
1,278,773	-				-1.6
1,278,773	-				-0.3
1,278,831	+				+1.3
1,278,831	+				+0.7
1,278,832	-				-0.6
1,278,832	-				-2.3
1,278,874	+				+0.7
1,278,874	+				+0.5
1,278,874	+				+0.1
1,278,874	+				+1.2
1,278,874	+				+1.7
1,278,874	+				+1.1
1,278,874	+				+1.7
1,278,874	+				+1.7
1,278,874	+				+1.7
1,278,874	+				-0.1
1,278,874	+				+2.3
1,278,874	+				-2.2
1,278,874	+				+3.0
1,278,875	-				-0.4
1,278,875	-				-2.9
1,278,875	-				+1.7
1,278,875	-				+3.3
1,278,875	-				+0.3
1,278,875	-				-1.0
1,278,875	-				-1.3
1,278,875	-				-0.6
1,278,875	-				-1.3
1,278,875	-				-1.7
1,278,875	-				-1.1
1,278,875	-				-2.1
1,278,875	-				+0.1
1,278,875	-				-0.3
1,278,875	-				+1.7
1,278,876	+				+0.1
1,278,876	+				+1.5
1,278,876	+				+1.1
1,278,876	+				+1.7
1,278,876	+				+1.1
1,278,876	+				+1.7
1,278,876	+				+1.7
1,278,876	+				+1.3
1,278,877	-				-3.7
1,278,877	-				-1.1
1,278,877	-				-1.5
1,278,877	-				-0.5
1,278,877	-				-0.3
1,278,877	-				-0.6
1,278,877	-				-2.1
1,278,877	-				-1.3
1,278,977	+		PFLU_RS05665	0.18	+1.7
1,278,977	+		PFLU_RS05665	0.18	+1.7
1,278,977	+		PFLU_RS05665	0.18	+0.5
1,278,977	+		PFLU_RS05665	0.18	+0.9
1,278,977	+		PFLU_RS05665	0.18	+1.3
1,278,977	+		PFLU_RS05665	0.18	-0.3
1,278,977	+		PFLU_RS05665	0.18	+0.9
1,278,977	+		PFLU_RS05665	0.18	+1.7
1,278,977	+		PFLU_RS05665	0.18	-2.1
1,278,978	-		PFLU_RS05665	0.18	+1.1
1,278,978	-		PFLU_RS05665	0.18	+1.7
1,278,978	-		PFLU_RS05665	0.18	+0.1
1,278,978	-		PFLU_RS05665	0.18	+0.1
1,278,978	-		PFLU_RS05665	0.18	+0.1
1,279,186	+		PFLU_RS05665	0.42	-1.0
1,279,186	+		PFLU_RS05665	0.42	+2.5
1,279,186	+		PFLU_RS05665	0.42	+0.7
1,279,186	+		PFLU_RS05665	0.42	+1.3
1,279,186	+		PFLU_RS05665	0.42	+1.7
1,279,186	+		PFLU_RS05665	0.42	+2.7
1,279,187	-		PFLU_RS05665	0.42	+1.7
1,279,187	-		PFLU_RS05665	0.42	+0.4
1,279,187	-		PFLU_RS05665	0.42	-0.9
1,279,187	-		PFLU_RS05665	0.42	+0.5
1,279,187	-		PFLU_RS05665	0.42	+1.3
1,279,259	+		PFLU_RS05665	0.51	+0.1
1,279,259	+		PFLU_RS05665	0.51	-0.3
1,279,260	-		PFLU_RS05665	0.51	+1.1
1,279,260	-		PFLU_RS05665	0.51	-0.6
1,279,260	-		PFLU_RS05665	0.51	-0.1
1,279,328	+		PFLU_RS05665	0.59	+2.1
1,279,329	-		PFLU_RS05665	0.59	-0.1
1,279,349	+		PFLU_RS05665	0.61	+0.1
1,279,358	+		PFLU_RS05665	0.62	-0.3
1,279,358	+		PFLU_RS05665	0.62	+0.7
1,279,358	+		PFLU_RS05665	0.62	+1.7
1,279,358	+		PFLU_RS05665	0.62	+2.3
1,279,358	+		PFLU_RS05665	0.62	+0.7
1,279,359	-		PFLU_RS05665	0.62	+2.3
1,279,359	-		PFLU_RS05665	0.62	+2.7
1,279,359	-		PFLU_RS05665	0.62	+0.4
1,279,359	-		PFLU_RS05665	0.62	-0.1
1,279,359	-		PFLU_RS05665	0.62	+2.9
1,279,359	-		PFLU_RS05665	0.62	+1.7
1,279,359	-		PFLU_RS05665	0.62	+0.7
1,279,405	-		PFLU_RS05665	0.68	-0.6
1,279,406	+		PFLU_RS05665	0.68	+2.0
1,279,406	+		PFLU_RS05665	0.68	-1.1
1,279,406	+		PFLU_RS05665	0.68	+3.3
1,279,406	+		PFLU_RS05665	0.68	-0.3
1,279,406	+		PFLU_RS05665	0.68	-0.0
1,279,406	+		PFLU_RS05665	0.68	+0.1
1,279,406	+		PFLU_RS05665	0.68	+1.7
1,279,406	+		PFLU_RS05665	0.68	+2.7
1,279,406	+		PFLU_RS05665	0.68	+0.4
1,279,406	+		PFLU_RS05665	0.68	+2.5
1,279,406	+		PFLU_RS05665	0.68	+0.4
1,279,406	+		PFLU_RS05665	0.68	+0.5
1,279,406	+		PFLU_RS05665	0.68	+0.7
1,279,406	+		PFLU_RS05665	0.68	+0.9
1,279,406	+		PFLU_RS05665	0.68	+2.3
1,279,406	+		PFLU_RS05665	0.68	+1.7
1,279,406	+		PFLU_RS05665	0.68	-0.3
1,279,406	+		PFLU_RS05665	0.68	+2.0
1,279,406	+		PFLU_RS05665	0.68	+2.7
1,279,406	+		PFLU_RS05665	0.68	+1.7
1,279,407	-		PFLU_RS05665	0.68	+1.7
1,279,407	-		PFLU_RS05665	0.68	+0.7
1,279,407	-		PFLU_RS05665	0.68	-0.3
1,279,407	-		PFLU_RS05665	0.68	+3.5
1,279,407	-		PFLU_RS05665	0.68	+4.3
1,279,407	-		PFLU_RS05665	0.68	+0.7
1,279,407	-		PFLU_RS05665	0.68	+2.1
1,279,407	-		PFLU_RS05665	0.68	+2.7
1,279,407	-		PFLU_RS05665	0.68	+0.7
1,279,407	-		PFLU_RS05665	0.68	+2.3
1,279,407	-		PFLU_RS05665	0.68	+0.9
1,279,407	-		PFLU_RS05665	0.68	+0.4
1,279,407	-		PFLU_RS05665	0.68	+0.4
1,279,407	-		PFLU_RS05665	0.68	+0.7
1,279,407	-		PFLU_RS05665	0.68	+2.7
1,279,407	-		PFLU_RS05665	0.68	-0.3
1,279,407	-		PFLU_RS05665	0.68	+2.7
1,279,407	-		PFLU_RS05665	0.68	+0.4
1,279,407	-		PFLU_RS05665	0.68	+0.1
1,279,407	-		PFLU_RS05665	0.68	+0.7
1,279,407	-		PFLU_RS05665	0.68	-0.4
1,279,407	-		PFLU_RS05665	0.68	-0.3
1,279,407	-		PFLU_RS05665	0.68	-1.6
1,279,407	-		PFLU_RS05665	0.68	-0.3
1,279,407	-		PFLU_RS05665	0.68	+0.7
1,279,407	-		PFLU_RS05665	0.68	+1.9
1,279,407	-		PFLU_RS05665	0.68	+1.7
1,279,407	-		PFLU_RS05665	0.68	+0.4
1,279,407	-		PFLU_RS05665	0.68	+0.6
1,279,407	-		PFLU_RS05665	0.68	+2.7
1,279,407	-		PFLU_RS05665	0.68	-1.1
1,279,407	-		PFLU_RS05665	0.68	+0.3
1,279,407	-		PFLU_RS05665	0.68	-0.3
1,279,407	-		PFLU_RS05665	0.68	+2.7
1,279,407	-		PFLU_RS05665	0.68	-0.4
1,279,443	+		PFLU_RS05665	0.72	+2.1
1,279,488	+		PFLU_RS05665	0.78	-0.3
1,279,502	+		PFLU_RS05665	0.79	+3.0
1,279,502	+		PFLU_RS05665	0.79	+2.3
1,279,503	-		PFLU_RS05665	0.79	+0.7
1,279,503	-		PFLU_RS05665	0.79	-0.3
1,279,503	-		PFLU_RS05665	0.79	+1.4
1,279,536	+		PFLU_RS05665	0.83	-0.1
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1,279,537	-		PFLU_RS05665	0.83	+1.7
1,279,537	-		PFLU_RS05665	0.83	+2.5
1,279,537	-		PFLU_RS05665	0.83	+3.7
1,279,537	-		PFLU_RS05665	0.83	+1.3
1,279,537	-		PFLU_RS05665	0.83	+2.7
1,279,596	+				+1.1
1,279,597	-				+2.1
1,279,798	+				-0.7
1,279,798	+				+0.5
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1,279,799	-				-3.0
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1,279,799	-				-0.6
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1,279,805	-				-0.7
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1,279,829	+				+0.1
1,279,830	-				+0.4
1,279,885	+				+0.9
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1,279,886	-				-0.2
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1,279,886	-				-2.7
1,279,931	+				+1.0
1,279,931	+				-1.1
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1,279,932	-				-1.6
1,279,946	+				-1.3
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1,279,947	-				-0.7
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1,280,067	-		PFLU_RS05670	0.12	-1.1
1,280,093	+		PFLU_RS05670	0.18	+0.1
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1,280,294	+		PFLU_RS05670	0.61	-0.7
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1,280,348	-		PFLU_RS05670	0.72	-0.8
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1,280,443	+				+1.9
1,280,443	+				-1.1
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1,280,541	+				-0.9
1,280,541	+				-1.2
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1,280,553	+				-2.6
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1,280,553	+				-1.9
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1,280,599	+				+2.0
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1,280,600	-				-1.4
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