Experiment: 4-Hydroxybenzoic Acid (C) 1.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS02820 and PFLU_RS02825 are separated by 71 nucleotides PFLU_RS02825 and PFLU_RS02830 are separated by 229 nucleotides PFLU_RS02830 and PFLU_RS02835 are separated by 124 nucleotides
PFLU_RS02820: PFLU_RS02820 - AraC family transcriptional regulator, at 646,489 to 647,277
_RS02820
PFLU_RS02825: PFLU_RS02825 - phosphate starvation-inducible protein PsiF, at 647,349 to 647,651
_RS02825
PFLU_RS02830: PFLU_RS02830 - AI-2E family transporter, at 647,881 to 648,894
_RS02830
PFLU_RS02835: PFLU_RS02835 - Hsp70 family protein, at 649,019 to 650,287
_RS02835
Position (kb) 647
648
649 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 646.945 kb on + strand, within PFLU_RS02820 at 647.119 kb on + strand, within PFLU_RS02820 at 647.185 kb on + strand, within PFLU_RS02820 at 647.206 kb on - strand at 647.263 kb on - strand at 647.263 kb on - strand at 647.263 kb on - strand at 647.283 kb on + strand at 647.283 kb on + strand at 647.283 kb on + strand at 647.284 kb on - strand at 647.284 kb on - strand at 647.284 kb on - strand at 647.284 kb on - strand at 647.284 kb on - strand at 647.284 kb on - strand at 647.284 kb on - strand at 647.284 kb on - strand at 647.298 kb on - strand at 647.332 kb on - strand at 647.615 kb on + strand, within PFLU_RS02825 at 647.616 kb on - strand, within PFLU_RS02825 at 647.624 kb on + strand at 647.624 kb on + strand at 647.645 kb on + strand at 647.645 kb on + strand at 647.645 kb on + strand at 647.646 kb on - strand at 647.646 kb on - strand at 647.646 kb on - strand at 647.646 kb on - strand at 647.646 kb on - strand at 647.654 kb on - strand at 647.726 kb on + strand at 647.726 kb on + strand at 647.726 kb on + strand at 647.812 kb on - strand at 647.812 kb on - strand at 647.857 kb on + strand at 647.880 kb on + strand at 647.880 kb on + strand at 647.880 kb on + strand at 647.880 kb on + strand at 647.880 kb on + strand at 647.880 kb on + strand at 647.880 kb on + strand at 647.880 kb on + strand at 647.880 kb on + strand at 647.880 kb on + strand at 647.881 kb on - strand at 647.881 kb on - strand at 647.881 kb on - strand at 647.881 kb on - strand at 647.881 kb on - strand at 647.881 kb on - strand at 647.881 kb on - strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.923 kb on + strand at 647.924 kb on - strand at 647.924 kb on - strand at 647.924 kb on - strand at 647.924 kb on - strand at 647.924 kb on - strand at 647.924 kb on - strand at 647.924 kb on - strand at 647.924 kb on - strand at 647.924 kb on - strand at 647.924 kb on - strand at 647.924 kb on - strand at 647.924 kb on - strand at 647.924 kb on - strand at 647.924 kb on - strand at 647.924 kb on - strand at 647.924 kb on - strand at 647.924 kb on - strand at 647.924 kb on - strand at 647.924 kb on - strand at 647.924 kb on - strand at 647.924 kb on - strand at 647.924 kb on - strand at 647.924 kb on - strand at 648.001 kb on + strand, within PFLU_RS02830 at 648.001 kb on + strand, within PFLU_RS02830 at 648.001 kb on + strand, within PFLU_RS02830 at 648.001 kb on + strand, within PFLU_RS02830 at 648.002 kb on - strand, within PFLU_RS02830 at 648.002 kb on - strand, within PFLU_RS02830 at 648.235 kb on + strand, within PFLU_RS02830 at 648.235 kb on + strand, within PFLU_RS02830 at 648.235 kb on + strand, within PFLU_RS02830 at 648.236 kb on - strand, within PFLU_RS02830 at 648.236 kb on - strand, within PFLU_RS02830 at 648.236 kb on - strand, within PFLU_RS02830 at 648.236 kb on - strand, within PFLU_RS02830 at 648.236 kb on - strand, within PFLU_RS02830 at 648.236 kb on - strand, within PFLU_RS02830 at 648.342 kb on + strand, within PFLU_RS02830 at 648.342 kb on + strand, within PFLU_RS02830 at 648.342 kb on + strand, within PFLU_RS02830 at 648.342 kb on + strand, within PFLU_RS02830 at 648.342 kb on + strand, within PFLU_RS02830 at 648.342 kb on + strand, within PFLU_RS02830 at 648.343 kb on - strand, within PFLU_RS02830 at 648.343 kb on - strand, within PFLU_RS02830 at 648.343 kb on - strand, within PFLU_RS02830 at 648.343 kb on - strand, within PFLU_RS02830 at 648.524 kb on + strand, within PFLU_RS02830 at 648.588 kb on - strand, within PFLU_RS02830 at 648.588 kb on - strand, within PFLU_RS02830 at 648.700 kb on + strand, within PFLU_RS02830 at 648.700 kb on + strand, within PFLU_RS02830 at 648.701 kb on - strand, within PFLU_RS02830 at 648.727 kb on + strand, within PFLU_RS02830 at 648.727 kb on + strand, within PFLU_RS02830 at 648.727 kb on + strand, within PFLU_RS02830 at 648.728 kb on - strand, within PFLU_RS02830 at 648.728 kb on - strand, within PFLU_RS02830 at 648.847 kb on + strand at 648.847 kb on + strand at 648.847 kb on + strand at 648.847 kb on + strand at 648.847 kb on + strand at 648.848 kb on - strand at 648.848 kb on - strand at 648.848 kb on - strand at 648.850 kb on + strand at 648.850 kb on + strand at 648.851 kb on - strand at 648.856 kb on + strand at 648.856 kb on + strand at 648.856 kb on + strand at 648.856 kb on + strand at 648.856 kb on + strand at 648.857 kb on - strand at 648.857 kb on - strand at 648.857 kb on - strand at 648.857 kb on - strand at 648.892 kb on + strand at 648.892 kb on + strand at 648.893 kb on - strand at 648.893 kb on - strand at 648.959 kb on + strand at 648.959 kb on + strand at 648.959 kb on + strand at 649.036 kb on + strand at 649.036 kb on + strand at 649.037 kb on - strand at 649.078 kb on + strand at 649.078 kb on + strand at 649.078 kb on + strand at 649.078 kb on + strand at 649.079 kb on - strand at 649.079 kb on - strand at 649.079 kb on - strand at 649.079 kb on - strand at 649.443 kb on + strand, within PFLU_RS02835 at 649.444 kb on - strand, within PFLU_RS02835 at 649.482 kb on + strand, within PFLU_RS02835 at 649.482 kb on + strand, within PFLU_RS02835 at 649.539 kb on + strand, within PFLU_RS02835 at 649.539 kb on + strand, within PFLU_RS02835 at 649.539 kb on + strand, within PFLU_RS02835 at 649.539 kb on + strand, within PFLU_RS02835 at 649.539 kb on + strand, within PFLU_RS02835 at 649.539 kb on + strand, within PFLU_RS02835 at 649.539 kb on + strand, within PFLU_RS02835 at 649.539 kb on + strand, within PFLU_RS02835 at 649.539 kb on + strand, within PFLU_RS02835 at 649.539 kb on + strand, within PFLU_RS02835 at 649.539 kb on + strand, within PFLU_RS02835 at 649.539 kb on + strand, within PFLU_RS02835 at 649.539 kb on + strand, within PFLU_RS02835 at 649.539 kb on + strand, within PFLU_RS02835 at 649.539 kb on + strand, within PFLU_RS02835 at 649.539 kb on + strand, within PFLU_RS02835 at 649.540 kb on - strand, within PFLU_RS02835 at 649.540 kb on - strand, within PFLU_RS02835 at 649.540 kb on - strand, within PFLU_RS02835 at 649.540 kb on - strand, within PFLU_RS02835 at 649.540 kb on - strand, within PFLU_RS02835 at 649.540 kb on - strand, within PFLU_RS02835 at 649.540 kb on - strand, within PFLU_RS02835 at 649.540 kb on - strand, within PFLU_RS02835 at 649.540 kb on - strand, within PFLU_RS02835 at 649.540 kb on - strand, within PFLU_RS02835 at 649.540 kb on - strand, within PFLU_RS02835 at 649.540 kb on - strand, within PFLU_RS02835 at 649.540 kb on - strand, within PFLU_RS02835 at 649.540 kb on - strand, within PFLU_RS02835 at 649.540 kb on - strand, within PFLU_RS02835 at 649.540 kb on - strand, within PFLU_RS02835 at 649.540 kb on - strand, within PFLU_RS02835 at 649.540 kb on - strand, within PFLU_RS02835 at 649.540 kb on - strand, within PFLU_RS02835 at 649.717 kb on + strand, within PFLU_RS02835 at 649.717 kb on + strand, within PFLU_RS02835 at 649.717 kb on + strand, within PFLU_RS02835 at 649.718 kb on - strand, within PFLU_RS02835 at 649.773 kb on + strand, within PFLU_RS02835 at 649.774 kb on - strand, within PFLU_RS02835 at 649.801 kb on - strand, within PFLU_RS02835
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) 1.5 mM remove 646,945 + PFLU_RS02820 0.58 -0.5 647,119 + PFLU_RS02820 0.80 +0.6 647,185 + PFLU_RS02820 0.88 -1.3 647,206 - -1.5 647,263 - +0.0 647,263 - +0.2 647,263 - +0.6 647,283 + +0.4 647,283 + +2.4 647,283 + +1.8 647,284 - +1.5 647,284 - -0.6 647,284 - +1.1 647,284 - -0.0 647,284 - +0.3 647,284 - -2.1 647,284 - -0.7 647,284 - -0.6 647,298 - +0.4 647,332 - +0.1 647,615 + PFLU_RS02825 0.88 +0.3 647,616 - PFLU_RS02825 0.88 +0.5 647,624 + +0.1 647,624 + -0.5 647,645 + -1.5 647,645 + +0.3 647,645 + -0.3 647,646 - +0.5 647,646 - -0.8 647,646 - +0.8 647,646 - +0.4 647,646 - -0.7 647,654 - +0.2 647,726 + +0.7 647,726 + -0.9 647,726 + -1.6 647,812 - -1.0 647,812 - +1.3 647,857 + +0.1 647,880 + +0.1 647,880 + -0.7 647,880 + +1.1 647,880 + +1.3 647,880 + -0.2 647,880 + +0.7 647,880 + -1.1 647,880 + +1.8 647,880 + -2.4 647,880 + +0.1 647,881 - -0.6 647,881 - -0.4 647,881 - +2.2 647,881 - +1.2 647,881 - -1.2 647,881 - +0.0 647,881 - +0.1 647,923 + -0.4 647,923 + +0.5 647,923 + +0.4 647,923 + -0.1 647,923 + +2.0 647,923 + +1.0 647,923 + +1.5 647,923 + +1.1 647,923 + +1.0 647,923 + +1.8 647,923 + +0.6 647,923 + +0.9 647,923 + -0.6 647,923 + +1.6 647,923 + +1.5 647,923 + +2.0 647,923 + +0.8 647,923 + +0.5 647,923 + -0.1 647,923 + +1.7 647,923 + +0.6 647,923 + -0.1 647,923 + +2.4 647,923 + +0.2 647,923 + +0.5 647,923 + +0.6 647,924 - -0.2 647,924 - -0.6 647,924 - +0.4 647,924 - +0.4 647,924 - +0.2 647,924 - +0.8 647,924 - -1.2 647,924 - +1.1 647,924 - +0.2 647,924 - +1.0 647,924 - -0.3 647,924 - -0.4 647,924 - +0.0 647,924 - -0.4 647,924 - +0.6 647,924 - +0.3 647,924 - +0.7 647,924 - +0.2 647,924 - +0.7 647,924 - -0.3 647,924 - -0.8 647,924 - -0.1 647,924 - +1.7 648,001 + PFLU_RS02830 0.12 +0.8 648,001 + PFLU_RS02830 0.12 -0.1 648,001 + PFLU_RS02830 0.12 +1.2 648,001 + PFLU_RS02830 0.12 -1.7 648,002 - PFLU_RS02830 0.12 +0.7 648,002 - PFLU_RS02830 0.12 -0.4 648,235 + PFLU_RS02830 0.35 +1.9 648,235 + PFLU_RS02830 0.35 +0.5 648,235 + PFLU_RS02830 0.35 +0.9 648,236 - PFLU_RS02830 0.35 +1.2 648,236 - PFLU_RS02830 0.35 -0.2 648,236 - PFLU_RS02830 0.35 +1.0 648,236 - PFLU_RS02830 0.35 +0.9 648,236 - PFLU_RS02830 0.35 +1.4 648,236 - PFLU_RS02830 0.35 +0.5 648,342 + PFLU_RS02830 0.45 -1.0 648,342 + PFLU_RS02830 0.45 -0.6 648,342 + PFLU_RS02830 0.45 -0.1 648,342 + PFLU_RS02830 0.45 -1.3 648,342 + PFLU_RS02830 0.45 +1.0 648,342 + PFLU_RS02830 0.45 +0.1 648,343 - PFLU_RS02830 0.46 +0.8 648,343 - PFLU_RS02830 0.46 +0.8 648,343 - PFLU_RS02830 0.46 -0.5 648,343 - PFLU_RS02830 0.46 +0.5 648,524 + PFLU_RS02830 0.63 +1.3 648,588 - PFLU_RS02830 0.70 +1.1 648,588 - PFLU_RS02830 0.70 +0.5 648,700 + PFLU_RS02830 0.81 -1.1 648,700 + PFLU_RS02830 0.81 +0.7 648,701 - PFLU_RS02830 0.81 +0.2 648,727 + PFLU_RS02830 0.83 -0.0 648,727 + PFLU_RS02830 0.83 +0.2 648,727 + PFLU_RS02830 0.83 +0.3 648,728 - PFLU_RS02830 0.84 +0.1 648,728 - PFLU_RS02830 0.84 +1.8 648,847 + -0.2 648,847 + -0.0 648,847 + -0.2 648,847 + +0.7 648,847 + +1.4 648,848 - +1.8 648,848 - +1.0 648,848 - +1.6 648,850 + +0.9 648,850 + -0.3 648,851 - +0.6 648,856 + +0.1 648,856 + +1.3 648,856 + +0.4 648,856 + +0.0 648,856 + +0.5 648,857 - +2.0 648,857 - +1.8 648,857 - +1.7 648,857 - +0.5 648,892 + -0.2 648,892 + -1.6 648,893 - +0.5 648,893 - -0.3 648,959 + +0.8 648,959 + +0.4 648,959 + -0.6 649,036 + -1.4 649,036 + +0.5 649,037 - +0.1 649,078 + -2.0 649,078 + -0.2 649,078 + +0.3 649,078 + -2.2 649,079 - +0.0 649,079 - -0.5 649,079 - -0.1 649,079 - -1.2 649,443 + PFLU_RS02835 0.33 -1.0 649,444 - PFLU_RS02835 0.33 +1.4 649,482 + PFLU_RS02835 0.36 -0.3 649,482 + PFLU_RS02835 0.36 -0.4 649,539 + PFLU_RS02835 0.41 -0.5 649,539 + PFLU_RS02835 0.41 +3.4 649,539 + PFLU_RS02835 0.41 -1.4 649,539 + PFLU_RS02835 0.41 -1.0 649,539 + PFLU_RS02835 0.41 +0.3 649,539 + PFLU_RS02835 0.41 +1.5 649,539 + PFLU_RS02835 0.41 +0.3 649,539 + PFLU_RS02835 0.41 +0.8 649,539 + PFLU_RS02835 0.41 +0.1 649,539 + PFLU_RS02835 0.41 -0.9 649,539 + PFLU_RS02835 0.41 +1.5 649,539 + PFLU_RS02835 0.41 -0.2 649,539 + PFLU_RS02835 0.41 +0.2 649,539 + PFLU_RS02835 0.41 +2.1 649,539 + PFLU_RS02835 0.41 +0.2 649,539 + PFLU_RS02835 0.41 -0.4 649,540 - PFLU_RS02835 0.41 +0.1 649,540 - PFLU_RS02835 0.41 +1.0 649,540 - PFLU_RS02835 0.41 +0.8 649,540 - PFLU_RS02835 0.41 -1.8 649,540 - PFLU_RS02835 0.41 +1.0 649,540 - PFLU_RS02835 0.41 -0.6 649,540 - PFLU_RS02835 0.41 +0.2 649,540 - PFLU_RS02835 0.41 -0.5 649,540 - PFLU_RS02835 0.41 +0.3 649,540 - PFLU_RS02835 0.41 -1.6 649,540 - PFLU_RS02835 0.41 +0.2 649,540 - PFLU_RS02835 0.41 +0.1 649,540 - PFLU_RS02835 0.41 -0.4 649,540 - PFLU_RS02835 0.41 -0.3 649,540 - PFLU_RS02835 0.41 +1.2 649,540 - PFLU_RS02835 0.41 -1.2 649,540 - PFLU_RS02835 0.41 -0.4 649,540 - PFLU_RS02835 0.41 -0.6 649,540 - PFLU_RS02835 0.41 +0.4 649,717 + PFLU_RS02835 0.55 +0.2 649,717 + PFLU_RS02835 0.55 -0.8 649,717 + PFLU_RS02835 0.55 +1.3 649,718 - PFLU_RS02835 0.55 -0.3 649,773 + PFLU_RS02835 0.59 -1.0 649,774 - PFLU_RS02835 0.59 -0.2 649,801 - PFLU_RS02835 0.62 -0.8
Or see this region's nucleotide sequence