Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1091

Experiment: L-Lysine 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine 200 mM
1,180,897	+		Psest_1089	0.77	-1.7
1,180,897	+		Psest_1089	0.77	+2.1
1,180,898	-		Psest_1089	0.77	+0.6
1,180,977	+		Psest_1089	0.87	+0.0
1,180,978	-		Psest_1089	0.87	+0.5
1,180,994	+		Psest_1089	0.89	-0.6
1,181,128	+				+0.5
1,181,437	+		Psest_1090	0.51	-1.6
1,181,437	+		Psest_1090	0.51	-0.6
1,181,437	+		Psest_1090	0.51	-0.2
1,181,438	-		Psest_1090	0.51	+0.3
1,181,459	-		Psest_1090	0.54	+0.0
1,181,612	+		Psest_1090	0.75	-0.3
1,181,612	+		Psest_1090	0.75	-1.1
1,181,613	-		Psest_1090	0.75	-1.8
1,181,613	-		Psest_1090	0.75	-1.3
1,181,613	-		Psest_1090	0.75	-3.3
1,181,613	-		Psest_1090	0.75	-0.7
1,181,698	+		Psest_1090	0.87	+1.4
1,181,698	+		Psest_1090	0.87	+0.9
1,181,698	+		Psest_1090	0.87	-1.6
1,181,699	-		Psest_1090	0.87	-0.8
1,181,874	+				+0.5
1,181,874	+				-0.5
1,181,874	+				-0.1
1,181,874	+				-0.3
1,181,874	+				-1.0
1,181,874	+				-1.1
1,181,874	+				-0.3
1,181,874	+				-1.7
1,181,874	+				-0.1
1,181,874	+				-0.5
1,181,874	+				+0.4
1,181,874	+				+0.5
1,181,874	+				+1.1
1,181,875	-				+1.6
1,181,875	-				+0.7
1,181,875	-				-1.5
1,181,875	-				+1.3
1,181,875	-				-0.2
1,181,875	-				-0.9
1,181,875	-				-1.0
1,181,875	-				-0.4
1,181,875	-				-1.2
1,181,875	-				+0.5
1,181,875	-				+0.2
1,181,875	-				-0.8
1,181,875	-				-0.8
1,181,875	-				-2.3
1,181,875	-				-0.3
1,181,875	-				+0.7
1,181,875	-				-1.0
1,181,875	-				-1.6
1,181,875	-				-1.3
1,181,875	-				-0.3
1,181,875	-				-0.8
1,181,875	-				-0.5
1,181,988	-				+1.2
1,182,000	+		Psest_1091	0.10	+1.0
1,182,315	+		Psest_1091	0.36	-0.6
1,182,315	+		Psest_1091	0.36	+0.1
1,182,315	+		Psest_1091	0.36	+0.2
1,182,316	-		Psest_1091	0.36	-0.2
1,182,316	-		Psest_1091	0.36	-0.5
1,182,325	-		Psest_1091	0.37	-0.4
1,182,325	-		Psest_1091	0.37	-0.3
1,182,325	-		Psest_1091	0.37	-1.2
1,182,325	-		Psest_1091	0.37	-1.3
1,182,325	-		Psest_1091	0.37	+0.1
1,182,381	+		Psest_1091	0.41	-1.5
1,182,382	-		Psest_1091	0.41	-0.2
1,182,382	-		Psest_1091	0.41	+0.6
1,182,382	-		Psest_1091	0.41	-0.3
1,182,382	-		Psest_1091	0.41	-0.8
1,182,382	-		Psest_1091	0.41	-0.1
1,182,382	-		Psest_1091	0.41	+0.9
1,182,382	-		Psest_1091	0.41	-1.8
1,182,382	-		Psest_1091	0.41	+1.0
1,182,400	-		Psest_1091	0.43	-1.0
1,182,510	+		Psest_1091	0.52	+0.8
1,182,510	+		Psest_1091	0.52	-0.8
1,182,510	+		Psest_1091	0.52	+0.4
1,182,510	+		Psest_1091	0.52	-0.3
1,182,510	+		Psest_1091	0.52	-1.1
1,182,510	+		Psest_1091	0.52	-0.9
1,182,510	+		Psest_1091	0.52	-1.0
1,182,510	+		Psest_1091	0.52	-1.1
1,182,510	+		Psest_1091	0.52	-1.5
1,182,510	+		Psest_1091	0.52	-0.9
1,182,510	+		Psest_1091	0.52	+0.6
1,182,510	+		Psest_1091	0.52	-0.0
1,182,511	-		Psest_1091	0.52	+0.3
1,182,511	-		Psest_1091	0.52	-0.3
1,182,511	-		Psest_1091	0.52	+0.1
1,182,511	-		Psest_1091	0.52	+0.2
1,182,511	-		Psest_1091	0.52	+0.0
1,182,511	-		Psest_1091	0.52	-1.3
1,182,511	-		Psest_1091	0.52	-3.3
1,182,756	+		Psest_1091	0.72	-3.0
1,182,760	-		Psest_1091	0.72	-1.3
1,182,760	-		Psest_1091	0.72	-0.8
1,182,804	+		Psest_1091	0.76	-1.9
1,182,804	+		Psest_1091	0.76	-0.5
1,182,805	-		Psest_1091	0.76	-0.4
1,182,823	-		Psest_1091	0.78	+0.2
1,182,823	-		Psest_1091	0.78	+1.9
1,182,957	+		Psest_1091	0.89	-2.1
1,182,957	+		Psest_1091	0.89	-0.9
1,182,957	+		Psest_1091	0.89	+0.2
1,182,957	+		Psest_1091	0.89	+0.8
1,182,957	+		Psest_1091	0.89	-0.3
1,182,957	+		Psest_1091	0.89	-0.6
1,182,957	+		Psest_1091	0.89	+0.4
1,182,957	+		Psest_1091	0.89	-0.7
1,182,957	+		Psest_1091	0.89	-0.8
1,182,957	+		Psest_1091	0.89	-0.8
1,182,957	+		Psest_1091	0.89	-3.0
1,182,957	+		Psest_1091	0.89	+0.6
1,182,957	+		Psest_1091	0.89	-0.7
1,182,957	+		Psest_1091	0.89	-0.8
1,182,958	-		Psest_1091	0.89	+0.4
1,182,958	-		Psest_1091	0.89	-1.1
1,182,958	-		Psest_1091	0.89	-0.1
1,182,958	-		Psest_1091	0.89	-1.2
1,182,958	-		Psest_1091	0.89	-1.1
1,182,958	-		Psest_1091	0.89	+0.7
1,182,958	-		Psest_1091	0.89	-1.0
1,182,958	-		Psest_1091	0.89	-0.1
1,182,958	-		Psest_1091	0.89	+0.6
1,182,958	-		Psest_1091	0.89	-1.4
1,182,958	-		Psest_1091	0.89	+0.1
1,182,958	-		Psest_1091	0.89	+1.1
1,183,008	+				+1.8
1,183,008	+				-0.2
1,183,008	+				-1.4
1,183,008	+				+0.4
1,183,008	+				-0.7
1,183,008	+				+1.0
1,183,009	-				-2.3
1,183,009	-				+0.2
1,183,009	-				+0.2
1,183,009	-				+1.7
1,183,009	-				-0.6
1,183,009	-				-0.8
1,183,314	+		Psest_1092	0.17	-0.6
1,183,314	+		Psest_1092	0.17	-0.4
1,183,314	+		Psest_1092	0.17	+0.1
1,183,315	-		Psest_1092	0.17	-1.0
1,183,315	-		Psest_1092	0.17	-1.4
1,183,315	-		Psest_1092	0.17	+0.8
1,183,315	-		Psest_1092	0.17	+0.3
1,183,315	-		Psest_1092	0.17	-1.3
1,183,315	-		Psest_1092	0.17	-0.6
1,183,315	-		Psest_1092	0.17	-0.3
1,183,353	+		Psest_1092	0.21	+3.1
1,183,353	+		Psest_1092	0.21	+1.2
1,183,353	+		Psest_1092	0.21	-1.4
1,183,353	+		Psest_1092	0.21	-1.3
1,183,354	-		Psest_1092	0.21	-0.6
1,183,368	+		Psest_1092	0.23	+1.1
1,183,369	-		Psest_1092	0.23	-1.6
1,183,369	-		Psest_1092	0.23	-1.3
1,183,609	-		Psest_1092	0.50	-1.1
1,183,659	+		Psest_1092	0.56	+1.7
1,183,659	+		Psest_1092	0.56	+0.7
1,183,659	+		Psest_1092	0.56	+0.1
1,183,660	-		Psest_1092	0.56	+0.8
1,183,689	+		Psest_1092	0.59	+1.7
1,183,690	-		Psest_1092	0.59	-2.6
1,183,690	-		Psest_1092	0.59	-1.6
1,183,745	-		Psest_1092	0.65	-1.7
1,183,767	+		Psest_1092	0.68	-1.4
1,183,767	+		Psest_1092	0.68	-0.7
1,183,767	+		Psest_1092	0.68	-0.9
1,183,768	-		Psest_1092	0.68	-0.4
1,183,768	-		Psest_1092	0.68	+0.3
1,183,768	-		Psest_1092	0.68	-2.2
1,183,768	-		Psest_1092	0.68	-0.1
1,183,768	-		Psest_1092	0.68	-0.7
1,183,768	-		Psest_1092	0.68	-1.7
1,183,768	-		Psest_1092	0.68	+0.2
1,183,768	-		Psest_1092	0.68	+0.2
1,183,768	-		Psest_1092	0.68	+2.3
1,183,768	-		Psest_1092	0.68	+0.2
1,183,768	-		Psest_1092	0.68	+0.4
1,183,773	+		Psest_1092	0.69	-0.9