Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3431

Experiment: Choline Lysine 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 20 mM
3,597,977	+		Psest_3430	0.56	+0.4
3,597,977	+		Psest_3430	0.56	+0.5
3,597,977	+		Psest_3430	0.56	-0.2
3,598,023	+		Psest_3430	0.58	-0.5
3,598,073	+		Psest_3430	0.60	-2.7
3,598,073	+		Psest_3430	0.60	+0.6
3,598,073	+		Psest_3430	0.60	-0.0
3,598,073	+		Psest_3430	0.60	-0.9
3,598,073	+		Psest_3430	0.60	+0.4
3,598,073	+		Psest_3430	0.60	-0.6
3,598,074	-		Psest_3430	0.60	-0.3
3,598,074	-		Psest_3430	0.60	-0.4
3,598,074	-		Psest_3430	0.60	+0.2
3,598,074	-		Psest_3430	0.60	+2.2
3,598,193	+		Psest_3430	0.66	-0.6
3,598,194	-		Psest_3430	0.66	-0.2
3,598,194	-		Psest_3430	0.66	+0.3
3,598,197	+		Psest_3430	0.66	-0.2
3,598,197	+		Psest_3430	0.66	+0.7
3,598,400	+		Psest_3430	0.75	-0.2
3,598,400	+		Psest_3430	0.75	-1.2
3,598,401	-		Psest_3430	0.75	+0.7
3,598,401	-		Psest_3430	0.75	-1.6
3,598,401	-		Psest_3430	0.75	-3.0
3,598,484	+		Psest_3430	0.79	+0.0
3,598,484	+		Psest_3430	0.79	-0.6
3,598,485	-		Psest_3430	0.79	-0.6
3,598,485	-		Psest_3430	0.79	-0.1
3,598,485	-		Psest_3430	0.79	+1.0
3,598,485	-		Psest_3430	0.79	-2.5
3,598,489	+		Psest_3430	0.79	+0.3
3,598,489	+		Psest_3430	0.79	+0.8
3,598,489	+		Psest_3430	0.79	+0.3
3,598,489	+		Psest_3430	0.79	+1.1
3,598,489	+		Psest_3430	0.79	-0.0
3,598,489	+		Psest_3430	0.79	+0.4
3,598,489	+		Psest_3430	0.79	-0.0
3,598,489	+		Psest_3430	0.79	+0.8
3,598,490	-		Psest_3430	0.79	+0.1
3,598,490	-		Psest_3430	0.79	+1.9
3,598,495	+		Psest_3430	0.79	+0.1
3,598,495	+		Psest_3430	0.79	-0.1
3,598,496	-		Psest_3430	0.79	+0.6
3,598,496	-		Psest_3430	0.79	-0.3
3,598,496	-		Psest_3430	0.79	-0.8
3,598,496	-		Psest_3430	0.79	-1.8
3,598,496	-		Psest_3430	0.79	+0.4
3,598,531	+		Psest_3430	0.81	-0.1
3,598,532	-		Psest_3430	0.81	+0.2
3,598,532	-		Psest_3430	0.81	-1.1
3,598,532	-		Psest_3430	0.81	+0.4
3,598,545	-		Psest_3430	0.82	-2.2
3,598,600	-		Psest_3430	0.84	+0.9
3,598,660	+		Psest_3430	0.87	+0.2
3,598,660	+		Psest_3430	0.87	-2.4
3,598,660	+		Psest_3430	0.87	-0.4
3,598,660	+		Psest_3430	0.87	-1.4
3,598,661	-		Psest_3430	0.87	+0.4
3,598,661	-		Psest_3430	0.87	-0.0
3,598,661	-		Psest_3430	0.87	-0.0
3,598,661	-		Psest_3430	0.87	-0.8
3,598,661	-		Psest_3430	0.87	+0.8
3,598,661	-		Psest_3430	0.87	+0.9
3,598,661	-		Psest_3430	0.87	+0.3
3,598,661	-		Psest_3430	0.87	+1.1
3,598,733	+				-1.6
3,598,733	+				+1.7
3,598,733	+				-1.2
3,598,734	-				-0.2
3,598,734	-				-1.1
3,598,734	-				-2.0
3,598,734	-				+0.2
3,598,734	-				+1.1
3,598,734	-				+1.4
3,598,791	-				+1.1
3,598,805	+				+0.1
3,598,806	-				-2.5
3,598,907	+				+1.1
3,599,146	-		Psest_3431	0.12	+0.9
3,599,154	+		Psest_3431	0.13	-0.5
3,599,155	-		Psest_3431	0.13	-1.3
3,599,155	-		Psest_3431	0.13	-1.4
3,599,245	+		Psest_3431	0.18	+0.4
3,599,245	+		Psest_3431	0.18	-0.5
3,599,245	+		Psest_3431	0.18	+1.7
3,599,245	+		Psest_3431	0.18	-1.7
3,599,245	+		Psest_3431	0.18	+0.4
3,599,246	-		Psest_3431	0.19	+0.3
3,599,339	+		Psest_3431	0.24	-0.2
3,599,350	-		Psest_3431	0.25	-0.6
3,599,440	+		Psest_3431	0.31	+1.1
3,599,440	+		Psest_3431	0.31	+0.4
3,599,440	+		Psest_3431	0.31	+0.1
3,599,441	-		Psest_3431	0.31	-1.8
3,599,441	-		Psest_3431	0.31	-2.0
3,599,441	-		Psest_3431	0.31	+0.3
3,599,441	-		Psest_3431	0.31	-1.1
3,599,441	-		Psest_3431	0.31	-0.0
3,599,441	-		Psest_3431	0.31	-0.2
3,599,744	+		Psest_3431	0.50	-0.1
3,599,744	+		Psest_3431	0.50	-0.1
3,599,745	-		Psest_3431	0.50	+0.9
3,599,745	-		Psest_3431	0.50	+3.8
3,599,745	-		Psest_3431	0.50	+0.5
3,599,745	-		Psest_3431	0.50	-3.0
3,599,745	-		Psest_3431	0.50	-0.5
3,599,754	+		Psest_3431	0.51	-2.2
3,599,754	+		Psest_3431	0.51	-0.4
3,599,772	+		Psest_3431	0.52	-0.2
3,599,772	+		Psest_3431	0.52	-0.4
3,599,772	+		Psest_3431	0.52	-1.2
3,599,773	-		Psest_3431	0.52	+1.1
3,599,773	-		Psest_3431	0.52	+0.2
3,599,773	-		Psest_3431	0.52	-0.6
3,599,773	-		Psest_3431	0.52	-0.9
3,599,773	-		Psest_3431	0.52	-0.7
3,599,773	-		Psest_3431	0.52	+0.8
3,599,773	-		Psest_3431	0.52	-1.4
3,599,773	-		Psest_3431	0.52	-0.3
3,599,939	+		Psest_3431	0.62	+0.6
3,599,940	-		Psest_3431	0.62	+1.0
3,599,950	-		Psest_3431	0.63	+1.8
3,599,955	+		Psest_3431	0.63	+0.3
3,599,969	+		Psest_3431	0.64	+0.0
3,599,969	+		Psest_3431	0.64	+1.2
3,599,969	+		Psest_3431	0.64	-0.1
3,599,970	-		Psest_3431	0.64	+0.3
3,599,970	-		Psest_3431	0.64	+0.4
3,599,970	-		Psest_3431	0.64	-1.6
3,599,970	-		Psest_3431	0.64	-0.2
3,600,006	+		Psest_3431	0.66	+0.4
3,600,007	-		Psest_3431	0.66	+0.1
3,600,197	-		Psest_3431	0.78	-1.6
3,600,197	-		Psest_3431	0.78	-0.0
3,600,197	-		Psest_3431	0.78	+0.1
3,600,197	-		Psest_3431	0.78	-0.5
3,600,197	-		Psest_3431	0.78	-0.8
3,600,198	+		Psest_3431	0.79	+1.0
3,600,199	-		Psest_3431	0.79	-0.8
3,600,199	-		Psest_3431	0.79	+0.7
3,600,202	+		Psest_3431	0.79	-0.4
3,600,202	+		Psest_3431	0.79	+0.1
3,600,202	+		Psest_3431	0.79	-1.3
3,600,202	+		Psest_3431	0.79	-1.4
3,600,202	+		Psest_3431	0.79	-1.1
3,600,203	-		Psest_3431	0.79	-0.5
3,600,248	+		Psest_3431	0.82	+0.3
3,600,249	-		Psest_3431	0.82	+0.1
3,600,376	+		Psest_3431	0.90	-2.0
3,600,376	+		Psest_3431	0.90	-1.0
3,600,376	+		Psest_3431	0.90	-0.2
3,600,377	-		Psest_3431	0.90	-0.5
3,600,413	-				+1.3
3,600,524	+				+1.6
3,600,793	-		Psest_3432	0.20	-0.4
3,600,824	-		Psest_3432	0.23	-0.9
3,600,959	+		Psest_3432	0.33	+0.4
3,600,960	-		Psest_3432	0.34	-0.1
3,600,971	+		Psest_3432	0.34	+0.6
3,600,989	+		Psest_3432	0.36	+0.5
3,601,087	+		Psest_3432	0.44	-2.2
3,601,087	+		Psest_3432	0.44	+0.7
3,601,181	+		Psest_3432	0.51	-0.6
3,601,181	+		Psest_3432	0.51	+1.0
3,601,181	+		Psest_3432	0.51	-0.9
3,601,181	+		Psest_3432	0.51	-0.2
3,601,181	+		Psest_3432	0.51	-1.5
3,601,182	-		Psest_3432	0.51	+1.3
3,601,182	-		Psest_3432	0.51	-0.9
3,601,182	-		Psest_3432	0.51	-0.2
3,601,182	-		Psest_3432	0.51	+0.2
3,601,182	-		Psest_3432	0.51	-0.0
3,601,185	+		Psest_3432	0.51	-0.8
3,601,185	+		Psest_3432	0.51	-0.3
3,601,185	+		Psest_3432	0.51	+1.1
3,601,185	+		Psest_3432	0.51	-2.1
3,601,370	+		Psest_3432	0.66	-2.2
3,601,370	+		Psest_3432	0.66	+0.4
3,601,401	-		Psest_3432	0.68	+0.3
3,601,469	+		Psest_3432	0.74	+1.2
3,601,499	+		Psest_3432	0.76	-0.9
3,601,500	-		Psest_3432	0.76	-0.7