Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28500

Experiment: Ferulic Acid (C) 1.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ferulic Acid (C) 1.5 mM
6,338,906	+		PFLU_RS28490	0.78	-0.1
6,338,906	+		PFLU_RS28490	0.78	-1.6
6,338,906	+		PFLU_RS28490	0.78	+0.2
6,338,906	+		PFLU_RS28490	0.78	-0.1
6,338,906	+		PFLU_RS28490	0.78	+0.5
6,338,906	+		PFLU_RS28490	0.78	+0.6
6,338,906	+		PFLU_RS28490	0.78	+1.1
6,338,907	-		PFLU_RS28490	0.78	-0.3
6,338,907	-		PFLU_RS28490	0.78	+0.7
6,338,907	-		PFLU_RS28490	0.78	-0.6
6,338,907	-		PFLU_RS28490	0.78	+4.2
6,338,907	-		PFLU_RS28490	0.78	-1.0
6,338,907	-		PFLU_RS28490	0.78	+1.5
6,338,939	+		PFLU_RS28490	0.80	+0.5
6,338,939	+		PFLU_RS28490	0.80	-0.6
6,338,939	+		PFLU_RS28490	0.80	-0.3
6,338,939	+		PFLU_RS28490	0.80	+2.5
6,338,939	+		PFLU_RS28490	0.80	-0.1
6,338,940	-		PFLU_RS28490	0.80	-0.9
6,338,940	-		PFLU_RS28490	0.80	+1.0
6,338,940	-		PFLU_RS28490	0.80	-0.7
6,338,940	-		PFLU_RS28490	0.80	-0.9
6,338,942	+		PFLU_RS28490	0.80	-0.2
6,338,943	-		PFLU_RS28490	0.80	+0.4
6,338,943	-		PFLU_RS28490	0.80	+2.1
6,338,943	-		PFLU_RS28490	0.80	+1.2
6,338,943	-		PFLU_RS28490	0.80	-0.4
6,338,943	-		PFLU_RS28490	0.80	-0.1
6,338,943	-		PFLU_RS28490	0.80	-0.0
6,338,943	-		PFLU_RS28490	0.80	+2.2
6,338,943	-		PFLU_RS28490	0.80	+0.5
6,338,943	-		PFLU_RS28490	0.80	+0.7
6,338,943	-		PFLU_RS28490	0.80	+0.6
6,338,951	+		PFLU_RS28490	0.81	+0.9
6,338,952	-		PFLU_RS28490	0.81	+1.2
6,338,977	-		PFLU_RS28490	0.83	-0.6
6,339,044	-		PFLU_RS28490	0.87	+2.6
6,339,044	-		PFLU_RS28490	0.87	-0.9
6,339,167	+				+0.3
6,339,167	+				+0.3
6,339,167	+				+1.2
6,339,167	+				-1.2
6,339,168	-				+0.1
6,339,247	+				-0.4
6,339,247	+				-0.6
6,339,247	+				-1.0
6,339,247	+				+1.6
6,339,247	+				-2.3
6,339,248	-				-2.0
6,339,248	-				+0.9
6,339,248	-				-1.0
6,339,248	-				-0.5
6,339,260	+				-0.4
6,339,261	-				+0.2
6,339,261	-				+0.4
6,339,503	+		PFLU_RS28495	0.46	+1.0
6,339,503	+		PFLU_RS28495	0.46	+3.2
6,339,574	+		PFLU_RS28495	0.59	-0.0
6,339,574	+		PFLU_RS28495	0.59	-0.7
6,339,574	+		PFLU_RS28495	0.59	-0.1
6,339,574	+		PFLU_RS28495	0.59	-1.4
6,339,574	+		PFLU_RS28495	0.59	-1.1
6,339,574	+		PFLU_RS28495	0.59	+3.2
6,339,574	+		PFLU_RS28495	0.59	+1.1
6,339,574	+		PFLU_RS28495	0.59	+1.0
6,339,575	-		PFLU_RS28495	0.59	+0.1
6,339,575	-		PFLU_RS28495	0.59	+2.2
6,339,575	-		PFLU_RS28495	0.59	+1.0
6,339,575	-		PFLU_RS28495	0.59	+1.0
6,339,575	-		PFLU_RS28495	0.59	+0.1
6,339,575	-		PFLU_RS28495	0.59	-0.8
6,339,575	-		PFLU_RS28495	0.59	+0.6
6,339,575	-		PFLU_RS28495	0.59	+0.2
6,339,575	-		PFLU_RS28495	0.59	+0.3
6,339,575	-		PFLU_RS28495	0.59	+0.8
6,339,681	+		PFLU_RS28495	0.79	-0.0
6,339,681	+		PFLU_RS28495	0.79	+0.6
6,339,681	+		PFLU_RS28495	0.79	+0.5
6,339,682	-		PFLU_RS28495	0.79	+1.1
6,339,682	-		PFLU_RS28495	0.79	-2.5
6,339,682	-		PFLU_RS28495	0.79	+0.0
6,339,682	-		PFLU_RS28495	0.79	+0.3
6,339,682	-		PFLU_RS28495	0.79	+0.4
6,339,682	-		PFLU_RS28495	0.79	-0.0
6,339,682	-		PFLU_RS28495	0.79	-0.4
6,339,682	-		PFLU_RS28495	0.79	-0.1
6,339,682	-		PFLU_RS28495	0.79	+0.4
6,339,741	+		PFLU_RS28495	0.90	-0.2
6,339,741	+		PFLU_RS28495	0.90	-0.2
6,339,741	+		PFLU_RS28495	0.90	-0.1
6,339,741	+		PFLU_RS28495	0.90	+1.0
6,339,741	+		PFLU_RS28495	0.90	+0.4
6,339,741	+		PFLU_RS28495	0.90	+0.7
6,339,742	-		PFLU_RS28495	0.90	+0.5
6,339,742	-		PFLU_RS28495	0.90	+1.0
6,339,742	-		PFLU_RS28495	0.90	+0.7
6,339,795	+				+1.5
6,339,795	+				-1.5
6,339,795	+				+0.3
6,339,795	+				+0.4
6,339,795	+				-1.3
6,339,795	+				+0.0
6,339,795	+				+2.2
6,339,795	+				+2.2
6,339,796	-				+0.4
6,339,796	-				+0.1
6,339,796	-				-1.8
6,339,857	+				-0.0
6,339,858	-				+1.1
6,339,865	+				-0.2
6,339,865	+				-1.7
6,339,866	-				+1.5
6,339,866	-				+0.2
6,339,879	+				-0.1
6,339,879	+				-1.0
6,339,879	+				+0.0
6,339,880	-				-2.3
6,339,880	-				+0.0
6,339,880	-				+4.2
6,339,880	-				-1.3
6,339,887	+				-1.8
6,339,888	-				-0.1
6,339,888	-				-0.4
6,340,040	-		PFLU_RS28500	0.10	+0.6
6,340,111	+		PFLU_RS28500	0.14	+1.4
6,340,111	+		PFLU_RS28500	0.14	-0.6
6,340,112	-		PFLU_RS28500	0.15	-0.0
6,340,112	-		PFLU_RS28500	0.15	-0.4
6,340,112	-		PFLU_RS28500	0.15	-1.6
6,340,112	-		PFLU_RS28500	0.15	+1.2
6,340,112	-		PFLU_RS28500	0.15	+1.6
6,340,112	-		PFLU_RS28500	0.15	+0.8
6,340,124	-		PFLU_RS28500	0.15	+2.2
6,340,228	-		PFLU_RS28500	0.22	+0.8
6,340,264	+		PFLU_RS28500	0.24	+0.2
6,340,264	+		PFLU_RS28500	0.24	-0.5
6,340,402	+		PFLU_RS28500	0.33	-0.1
6,340,402	+		PFLU_RS28500	0.33	-0.1
6,340,453	+		PFLU_RS28500	0.36	-1.4
6,340,543	+		PFLU_RS28500	0.42	+0.4
6,340,543	+		PFLU_RS28500	0.42	-0.4
6,340,543	+		PFLU_RS28500	0.42	+1.4
6,340,543	+		PFLU_RS28500	0.42	-1.3
6,340,543	+		PFLU_RS28500	0.42	-1.5
6,340,544	-		PFLU_RS28500	0.42	-0.9
6,340,544	-		PFLU_RS28500	0.42	-0.5
6,340,570	+		PFLU_RS28500	0.43	+0.2
6,340,570	+		PFLU_RS28500	0.43	+1.7
6,340,570	+		PFLU_RS28500	0.43	+0.6
6,340,570	+		PFLU_RS28500	0.43	-0.2
6,340,570	+		PFLU_RS28500	0.43	-0.4
6,340,571	-		PFLU_RS28500	0.43	-0.0
6,340,571	-		PFLU_RS28500	0.43	-0.8
6,340,571	-		PFLU_RS28500	0.43	-0.7
6,340,666	+		PFLU_RS28500	0.49	-0.9
6,340,666	+		PFLU_RS28500	0.49	-0.0
6,340,666	+		PFLU_RS28500	0.49	-0.3
6,340,666	+		PFLU_RS28500	0.49	-0.3
6,340,666	+		PFLU_RS28500	0.49	+1.2
6,340,667	-		PFLU_RS28500	0.49	+0.9
6,340,667	-		PFLU_RS28500	0.49	-1.8
6,340,667	-		PFLU_RS28500	0.49	+0.1
6,340,667	-		PFLU_RS28500	0.49	-0.2
6,340,667	-		PFLU_RS28500	0.49	-0.9
6,340,667	-		PFLU_RS28500	0.49	+1.6
6,340,667	-		PFLU_RS28500	0.49	-0.7
6,340,667	-		PFLU_RS28500	0.49	+1.2
6,340,667	-		PFLU_RS28500	0.49	-0.6
6,340,667	-		PFLU_RS28500	0.49	+0.0
6,340,667	-		PFLU_RS28500	0.49	-0.4
6,340,667	-		PFLU_RS28500	0.49	+0.9
6,340,667	-		PFLU_RS28500	0.49	+0.4
6,340,667	-		PFLU_RS28500	0.49	-0.9
6,340,813	+		PFLU_RS28500	0.58	-1.4
6,340,814	-		PFLU_RS28500	0.59	-0.0
6,340,814	-		PFLU_RS28500	0.59	-0.9
6,340,814	-		PFLU_RS28500	0.59	+0.4
6,340,814	-		PFLU_RS28500	0.59	+0.4
6,340,834	+		PFLU_RS28500	0.60	+1.0
6,340,834	+		PFLU_RS28500	0.60	+0.3
6,340,834	+		PFLU_RS28500	0.60	+0.2
6,340,834	+		PFLU_RS28500	0.60	-0.6
6,340,834	+		PFLU_RS28500	0.60	-2.2
6,340,834	+		PFLU_RS28500	0.60	+1.6
6,340,834	+		PFLU_RS28500	0.60	+0.3
6,340,834	+		PFLU_RS28500	0.60	-0.5
6,340,834	+		PFLU_RS28500	0.60	+0.0
6,340,834	+		PFLU_RS28500	0.60	+0.4
6,340,835	-		PFLU_RS28500	0.60	+0.1
6,340,835	-		PFLU_RS28500	0.60	-0.9
6,340,835	-		PFLU_RS28500	0.60	+0.9
6,340,835	-		PFLU_RS28500	0.60	-0.3
6,340,835	-		PFLU_RS28500	0.60	+0.3
6,340,835	-		PFLU_RS28500	0.60	+0.5
6,340,835	-		PFLU_RS28500	0.60	+2.2
6,340,835	-		PFLU_RS28500	0.60	-0.2
6,340,882	+		PFLU_RS28500	0.63	+4.2
6,340,882	+		PFLU_RS28500	0.63	+1.0
6,340,882	+		PFLU_RS28500	0.63	-0.9
6,340,882	+		PFLU_RS28500	0.63	+0.6
6,340,883	-		PFLU_RS28500	0.63	+0.5
6,340,883	-		PFLU_RS28500	0.63	+1.2
6,340,904	+		PFLU_RS28500	0.64	-1.2
6,340,904	+		PFLU_RS28500	0.64	+0.0
6,340,904	+		PFLU_RS28500	0.64	-1.7
6,340,904	+		PFLU_RS28500	0.64	+0.5
6,340,904	+		PFLU_RS28500	0.64	+0.9
6,340,904	+		PFLU_RS28500	0.64	+1.0
6,340,904	+		PFLU_RS28500	0.64	+2.5
6,340,904	+		PFLU_RS28500	0.64	-0.6
6,340,904	+		PFLU_RS28500	0.64	-0.3
6,340,904	+		PFLU_RS28500	0.64	-0.9
6,340,905	-		PFLU_RS28500	0.64	+0.1
6,340,905	-		PFLU_RS28500	0.64	+0.6
6,340,905	-		PFLU_RS28500	0.64	+1.7
6,340,905	-		PFLU_RS28500	0.64	+0.9
6,340,905	-		PFLU_RS28500	0.64	+0.7
6,340,905	-		PFLU_RS28500	0.64	-1.4
6,340,905	-		PFLU_RS28500	0.64	-1.0
6,340,920	+		PFLU_RS28500	0.65	-1.0
6,340,978	-		PFLU_RS28500	0.69	-0.9
6,341,077	+		PFLU_RS28500	0.75	-0.9
6,341,078	-		PFLU_RS28500	0.75	+0.2
6,341,092	+		PFLU_RS28500	0.76	-1.3
6,341,092	+		PFLU_RS28500	0.76	+1.0
6,341,093	-		PFLU_RS28500	0.76	-0.4
6,341,093	-		PFLU_RS28500	0.76	-0.8
6,341,093	-		PFLU_RS28500	0.76	-0.3
6,341,191	+		PFLU_RS28500	0.82	-2.1
6,341,191	+		PFLU_RS28500	0.82	+0.2
6,341,192	-		PFLU_RS28500	0.82	+0.2
6,341,276	+		PFLU_RS28500	0.87	-0.1
6,341,276	+		PFLU_RS28500	0.87	+0.5
6,341,276	+		PFLU_RS28500	0.87	-1.5
6,341,276	+		PFLU_RS28500	0.87	+0.6
6,341,276	+		PFLU_RS28500	0.87	+0.0
6,341,276	+		PFLU_RS28500	0.87	+0.2
6,341,276	+		PFLU_RS28500	0.87	+0.2
6,341,276	+		PFLU_RS28500	0.87	+0.0
6,341,276	+		PFLU_RS28500	0.87	-0.5
6,341,276	+		PFLU_RS28500	0.87	+0.8
6,341,276	+		PFLU_RS28500	0.87	+0.3
6,341,276	+		PFLU_RS28500	0.87	-0.3
6,341,276	+		PFLU_RS28500	0.87	-1.6
6,341,276	+		PFLU_RS28500	0.87	+1.9
6,341,276	+		PFLU_RS28500	0.87	-0.5
6,341,276	+		PFLU_RS28500	0.87	-1.0
6,341,276	+		PFLU_RS28500	0.87	+0.5
6,341,276	+		PFLU_RS28500	0.87	-0.6
6,341,276	+		PFLU_RS28500	0.87	+0.1
6,341,277	-		PFLU_RS28500	0.88	-1.6
6,341,277	-		PFLU_RS28500	0.88	+0.9
6,341,277	-		PFLU_RS28500	0.88	+1.5
6,341,277	-		PFLU_RS28500	0.88	-0.7
6,341,277	-		PFLU_RS28500	0.88	+0.6
6,341,277	-		PFLU_RS28500	0.88	+0.7
6,341,277	-		PFLU_RS28500	0.88	-0.5
6,341,277	-		PFLU_RS28500	0.88	+1.6
6,341,277	-		PFLU_RS28500	0.88	+1.3
6,341,277	-		PFLU_RS28500	0.88	-1.3
6,341,277	-		PFLU_RS28500	0.88	+0.9
6,341,277	-		PFLU_RS28500	0.88	+1.2
6,341,277	-		PFLU_RS28500	0.88	+0.0
6,341,277	-		PFLU_RS28500	0.88	-0.7
6,341,277	-		PFLU_RS28500	0.88	+0.9
6,341,277	-		PFLU_RS28500	0.88	-1.0
6,341,411	+				-2.2
6,341,411	+				+0.4
6,341,411	+				+1.6
6,341,419	+				+0.1
6,341,419	+				-1.5
6,341,419	+				-0.5
6,341,420	-				+0.4
6,341,499	+				+0.6
6,341,499	+				-0.8
6,341,499	+				-0.7
6,341,499	+				-0.4
6,341,499	+				+2.9
6,341,499	+				-1.0
6,341,499	+				-0.7
6,341,499	+				-1.7
6,341,499	+				-1.2
6,341,499	+				+0.1
6,341,499	+				-0.8
6,341,499	+				+0.6
6,341,499	+				-0.7
6,341,499	+				-0.5
6,341,499	+				+1.2
6,341,499	+				-1.6
6,341,499	+				+0.0
6,341,499	+				+0.7
6,341,499	+				-2.4
6,341,499	+				+0.3
6,341,499	+				+1.2
6,341,499	+				+0.2
6,341,499	+				-0.4
6,341,499	+				+0.6
6,341,499	+				-0.1
6,341,499	+				-0.4
6,341,499	+				-1.8
6,341,499	+				-0.0
6,341,499	+				-0.4
6,341,500	-				+1.2
6,341,500	-				+1.4
6,341,500	-				+1.6
6,341,500	-				+1.3
6,341,500	-				+0.4
6,341,500	-				-1.6
6,341,500	-				-0.8
6,341,500	-				-0.4
6,341,500	-				-0.3
6,341,500	-				+1.4
6,341,500	-				-1.8
6,341,500	-				+2.2
6,341,500	-				-1.0
6,341,500	-				+0.6
6,341,500	-				-0.5
6,341,500	-				+1.2
6,341,500	-				+0.4
6,341,500	-				-0.3
6,341,500	-				+1.2
6,341,500	-				+0.9
6,341,500	-				+0.7
6,341,500	-				+0.9
6,341,500	-				+2.5
6,341,500	-				-1.8
6,341,500	-				+0.2
6,341,500	-				-2.3
6,341,500	-				+2.2
6,341,500	-				+0.9
6,341,507	+				-1.3
6,341,507	+				-0.3
6,341,507	+				-1.0
6,341,508	-				-2.6
6,341,508	-				+0.3
6,341,508	-				+0.6
6,341,508	-				+0.4
6,341,508	-				+1.6
6,342,080	+				-1.6
6,342,081	-				-0.4
6,342,081	-				+0.1
6,342,081	-				+1.2
6,342,081	-				+0.2
6,342,081	-				+0.3
6,342,081	-				-0.3
6,342,081	-				+1.2
6,342,165	+				+2.0
6,342,166	-				-1.7
6,342,240	+				-0.4
6,342,240	+				+0.4
6,342,240	+				+0.7
6,342,241	-				+0.5
6,342,241	-				+0.1
6,342,241	-				-0.9
6,342,241	-				+1.2
6,342,241	-				+0.2
6,342,241	-				+0.6
6,342,241	-				+1.3
6,342,288	+				-0.3
6,342,288	+				+0.0
6,342,288	+				-0.4
6,342,288	+				-1.4
6,342,288	+				-0.7