Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS18905

Experiment: Ferulic Acid (C) 1.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ferulic Acid (C) 1.5 mM
4,272,274	-		PFLU_RS18900	0.19	+0.9
4,272,315	+		PFLU_RS18900	0.22	+0.3
4,272,392	+		PFLU_RS18900	0.29	+1.1
4,272,392	+		PFLU_RS18900	0.29	+1.0
4,272,392	+		PFLU_RS18900	0.29	+2.7
4,272,393	-		PFLU_RS18900	0.29	+2.1
4,272,393	-		PFLU_RS18900	0.29	+3.3
4,272,393	-		PFLU_RS18900	0.29	+0.3
4,272,410	+		PFLU_RS18900	0.30	+1.4
4,272,410	+		PFLU_RS18900	0.30	+1.1
4,272,410	+		PFLU_RS18900	0.30	-0.4
4,272,411	-		PFLU_RS18900	0.30	+0.9
4,272,411	-		PFLU_RS18900	0.30	+0.6
4,272,450	+		PFLU_RS18900	0.33	-0.6
4,272,572	+		PFLU_RS18900	0.43	+1.9
4,272,572	+		PFLU_RS18900	0.43	+1.7
4,272,572	+		PFLU_RS18900	0.43	-0.1
4,272,618	-		PFLU_RS18900	0.47	+1.7
4,272,618	-		PFLU_RS18900	0.47	+1.5
4,272,618	-		PFLU_RS18900	0.47	+0.9
4,272,891	-		PFLU_RS18900	0.70	+1.4
4,272,891	-		PFLU_RS18900	0.70	+1.1
4,273,079	+		PFLU_RS18900	0.86	+0.1
4,273,079	+		PFLU_RS18900	0.86	+0.9
4,273,080	-		PFLU_RS18900	0.86	+1.4
4,273,080	-		PFLU_RS18900	0.86	+0.5
4,273,080	-		PFLU_RS18900	0.86	+3.1
4,273,080	-		PFLU_RS18900	0.86	+0.5
4,273,112	+		PFLU_RS18900	0.88	+3.1
4,273,112	+		PFLU_RS18900	0.88	-0.3
4,273,121	+		PFLU_RS18900	0.89	-0.1
4,273,121	+		PFLU_RS18900	0.89	+0.5
4,273,121	+		PFLU_RS18900	0.89	-0.2
4,273,122	-		PFLU_RS18900	0.89	+3.3
4,273,258	+				+0.4
4,273,258	+				-0.4
4,273,258	+				+1.8
4,273,258	+				+0.7
4,273,258	+				+2.1
4,273,258	+				+0.6
4,273,258	+				+1.3
4,273,259	-				+1.4
4,273,259	-				+0.3
4,273,259	-				+0.9
4,273,259	-				+1.1
4,273,269	-				-0.6
4,273,423	+		PFLU_RS18905	0.11	+0.9
4,273,423	+		PFLU_RS18905	0.11	+1.1
4,273,423	+		PFLU_RS18905	0.11	+0.6
4,273,423	+		PFLU_RS18905	0.11	+3.1
4,273,423	+		PFLU_RS18905	0.11	+1.4
4,273,424	-		PFLU_RS18905	0.11	+1.7
4,273,424	-		PFLU_RS18905	0.11	+1.0
4,273,424	-		PFLU_RS18905	0.11	+1.7
4,273,424	-		PFLU_RS18905	0.11	+0.6
4,273,424	-		PFLU_RS18905	0.11	+1.7
4,273,424	-		PFLU_RS18905	0.11	-0.1
4,273,433	+		PFLU_RS18905	0.11	-0.1
4,273,433	+		PFLU_RS18905	0.11	+0.1
4,273,433	+		PFLU_RS18905	0.11	+0.7
4,273,433	+		PFLU_RS18905	0.11	+1.4
4,273,433	+		PFLU_RS18905	0.11	+2.1
4,273,433	+		PFLU_RS18905	0.11	+1.7
4,273,434	-		PFLU_RS18905	0.12	+1.7
4,273,434	-		PFLU_RS18905	0.12	+0.2
4,273,434	-		PFLU_RS18905	0.12	+0.2
4,273,434	-		PFLU_RS18905	0.12	+1.1
4,273,437	+		PFLU_RS18905	0.12	+1.6
4,273,437	+		PFLU_RS18905	0.12	-1.5
4,273,438	-		PFLU_RS18905	0.12	+0.1
4,273,455	-		PFLU_RS18905	0.13	-0.1
4,273,455	-		PFLU_RS18905	0.13	+1.3
4,273,475	+		PFLU_RS18905	0.14	+0.6
4,273,592	+		PFLU_RS18905	0.22	-1.5
4,273,592	+		PFLU_RS18905	0.22	+1.1
4,273,593	-		PFLU_RS18905	0.22	-1.2
4,273,593	-		PFLU_RS18905	0.22	+1.4
4,273,593	-		PFLU_RS18905	0.22	-0.7
4,273,593	-		PFLU_RS18905	0.22	+1.0
4,273,593	-		PFLU_RS18905	0.22	+1.7
4,273,593	-		PFLU_RS18905	0.22	+1.1
4,273,613	+		PFLU_RS18905	0.24	+0.7
4,273,613	+		PFLU_RS18905	0.24	-0.4
4,273,613	+		PFLU_RS18905	0.24	+1.5
4,273,689	+		PFLU_RS18905	0.29	+0.7
4,273,689	+		PFLU_RS18905	0.29	+0.4
4,273,689	+		PFLU_RS18905	0.29	+1.5
4,273,690	-		PFLU_RS18905	0.29	+1.4
4,273,690	-		PFLU_RS18905	0.29	-0.1
4,273,690	-		PFLU_RS18905	0.29	+1.1
4,273,776	-		PFLU_RS18905	0.35	+0.9
4,274,051	+		PFLU_RS18905	0.54	+1.7
4,274,052	-		PFLU_RS18905	0.54	+2.3
4,274,174	+		PFLU_RS18905	0.62	-0.1
4,274,174	+		PFLU_RS18905	0.62	-0.9
4,274,174	+		PFLU_RS18905	0.62	+0.2
4,274,174	+		PFLU_RS18905	0.62	+0.5
4,274,174	+		PFLU_RS18905	0.62	+0.4
4,274,175	-		PFLU_RS18905	0.63	+0.9
4,274,175	-		PFLU_RS18905	0.63	+1.3
4,274,297	+		PFLU_RS18905	0.71	+0.7
4,274,297	+		PFLU_RS18905	0.71	-0.3
4,274,297	+		PFLU_RS18905	0.71	+0.9
4,274,297	+		PFLU_RS18905	0.71	+0.8
4,274,297	+		PFLU_RS18905	0.71	+0.4
4,274,297	+		PFLU_RS18905	0.71	+1.5
4,274,298	-		PFLU_RS18905	0.71	+0.6
4,274,298	-		PFLU_RS18905	0.71	+0.7
4,274,333	+		PFLU_RS18905	0.73	+0.8
4,274,334	-		PFLU_RS18905	0.73	+1.0
4,274,334	-		PFLU_RS18905	0.73	+1.1
4,274,334	-		PFLU_RS18905	0.73	+4.0
4,274,334	-		PFLU_RS18905	0.73	-0.1
4,274,436	-		PFLU_RS18905	0.81	+2.7
4,274,436	-		PFLU_RS18905	0.81	+0.9
4,274,657	+				+0.7
4,274,657	+				-0.1
4,274,657	+				+1.7
4,274,657	+				+0.6
4,274,657	+				-0.1
4,274,657	+				+0.1
4,274,657	+				-0.3
4,274,657	+				+0.6
4,274,657	+				+0.4
4,274,658	-				+2.3
4,274,658	-				-0.1
4,274,658	-				-0.8
4,274,658	-				+0.1
4,274,658	-				+0.1
4,274,658	-				+1.3
4,274,658	-				+1.2
4,274,728	-				+0.1
4,274,728	-				+1.6
4,274,728	-				+3.1
4,274,760	+				-0.4
4,274,760	+				+0.0
4,274,760	+				+0.3
4,274,761	-				+1.6
4,274,776	-		PFLU_RS18910	0.13	-2.2
4,274,892	+		PFLU_RS18910	0.37	-0.6
4,274,892	+		PFLU_RS18910	0.37	+1.7
4,274,892	+		PFLU_RS18910	0.37	+1.9
4,274,893	-		PFLU_RS18910	0.38	-0.7
4,274,893	-		PFLU_RS18910	0.38	+0.1
4,274,893	-		PFLU_RS18910	0.38	+0.4
4,274,893	-		PFLU_RS18910	0.38	-0.3
4,274,893	-		PFLU_RS18910	0.38	-1.4
4,274,893	-		PFLU_RS18910	0.38	-0.1
4,274,893	-		PFLU_RS18910	0.38	-0.4
4,274,893	-		PFLU_RS18910	0.38	-0.7
4,275,168	-				+1.4
4,275,201	+				+0.4
4,275,201	+				-0.7
4,275,201	+				+0.4
4,275,201	+				+1.1
4,275,201	+				+1.9
4,275,201	+				+1.4
4,275,201	+				+1.4
4,275,201	+				+0.0
4,275,201	+				+1.4
4,275,201	+				+0.1
4,275,201	+				+2.4
4,275,202	-				-0.0
4,275,202	-				+3.1
4,275,202	-				-0.2
4,275,202	-				-1.9
4,275,202	-				-0.6
4,275,202	-				-1.4
4,275,202	-				+0.4
4,275,202	-				-0.5
4,275,202	-				+1.0
4,275,202	-				+0.3
4,275,204	+				+2.7
4,275,204	+				+0.9
4,275,204	+				+3.3
4,275,204	+				-0.9
4,275,205	-				-1.1
4,275,205	-				-1.4
4,275,205	-				-0.9
4,275,205	-				-1.4
4,275,268	-				-1.8
4,275,271	+				-0.3
4,275,272	-				-0.4
4,275,272	-				-1.2
4,275,272	-				+0.7
4,275,327	-				+0.1
4,275,327	-				-0.1
4,275,348	+				-2.0
4,275,348	+				+2.0
4,275,348	+				+1.4
4,275,348	+				-1.3
4,275,348	+				-1.3
4,275,348	+				-0.6
4,275,348	+				-1.4
4,275,349	-				+0.0
4,275,349	-				-0.4
4,275,349	-				+1.4
4,275,349	-				-0.4
4,275,349	-				-0.7
4,275,355	+				-0.5
4,275,356	-				+0.1
4,275,356	-				-0.8
4,275,393	+				-0.6
4,275,393	+				-0.9
4,275,393	+				+0.3
4,275,393	+				+1.1
4,275,393	+				+1.7
4,275,394	-				-1.4
4,275,394	-				+0.2
4,275,394	-				-1.2
4,275,394	-				-2.2
4,275,394	-				+0.3
4,275,415	-				+0.3
4,275,415	-				-0.6
4,275,628	+				-0.4
4,275,628	+				-0.0
4,275,628	+				-1.2
4,275,628	+				-1.1
4,275,628	+				-1.7
4,275,628	+				-0.3
4,275,628	+				+1.4
4,275,628	+				-0.3
4,275,628	+				-0.5
4,275,628	+				-1.4
4,275,628	+				-0.7
4,275,629	-				+0.1
4,275,629	-				-0.6
4,275,629	-				+0.4
4,275,629	-				-1.1
4,275,629	-				-2.6
4,275,629	-				-0.4
4,275,629	-				-0.7
4,275,629	-				-1.9
4,275,629	-				-0.2
4,275,629	-				+0.4
4,275,629	-				-0.3
4,275,629	-				-0.0
4,275,629	-				+2.4
4,275,629	-				-1.0
4,275,629	-				+0.7
4,275,634	+				-2.4
4,275,634	+				+0.4
4,275,634	+				+0.1
4,275,634	+				+0.8
4,275,634	+				-2.4
4,275,634	+				-2.7
4,275,635	-				+0.9
4,275,635	-				-0.5
4,275,675	+				+0.1
4,275,675	+				-0.7
4,275,675	+				-0.5
4,275,676	-				+2.3
4,275,676	-				+0.3
4,275,676	-				-1.3
4,275,676	-				-0.3
4,275,676	-				+1.3
4,275,676	-				+0.1