Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS13425

Experiment: Ferulic Acid (C) 1.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ferulic Acid (C) 1.5 mM
3,031,345	+				-1.0
3,031,346	-				+1.9
3,031,346	-				+2.9
3,031,372	+				-1.3
3,031,372	+				+2.6
3,031,372	+				+0.4
3,031,372	+				+1.0
3,031,372	+				-0.2
3,031,372	+				+0.7
3,031,372	+				-1.1
3,031,373	-				+0.6
3,031,373	-				+0.2
3,031,373	-				-1.6
3,031,373	-				+0.6
3,031,373	-				+0.3
3,031,373	-				+1.6
3,031,373	-				-0.4
3,031,413	+				+1.6
3,031,413	+				-0.5
3,031,413	+				-0.5
3,031,413	+				-0.5
3,031,413	+				+0.5
3,031,413	+				-1.4
3,031,413	+				+0.2
3,031,413	+				+1.0
3,031,413	+				+0.0
3,031,413	+				-2.1
3,031,414	-				+0.6
3,031,414	-				-1.1
3,031,414	-				+0.9
3,031,414	-				-1.1
3,031,414	-				-0.2
3,031,414	-				-0.2
3,031,414	-				-0.1
3,031,414	-				+1.3
3,031,493	+				-0.8
3,031,500	+				+0.4
3,031,520	+				-0.5
3,031,520	+				-0.5
3,031,520	+				+0.3
3,031,520	+				+1.0
3,031,520	+				+0.5
3,031,520	+				+0.5
3,031,520	+				+0.6
3,031,520	+				-0.2
3,031,521	-				+0.6
3,031,521	-				-1.5
3,031,521	-				+1.4
3,031,532	+				-0.8
3,031,532	+				+1.3
3,031,533	-				-0.1
3,031,536	+				+0.5
3,031,536	+				+0.2
3,031,537	-				-0.2
3,031,537	-				-0.2
3,031,557	-				+0.6
3,031,581	+				+0.0
3,031,582	-				+0.0
3,031,595	+				-1.2
3,031,595	+				-0.8
3,031,596	-				-1.1
3,031,596	-				-0.4
3,031,596	-				-0.7
3,031,596	-				-0.3
3,031,596	-				+1.0
3,031,741	-		PFLU_RS13420	0.26	-1.3
3,031,751	+		PFLU_RS13420	0.28	+0.9
3,031,751	+		PFLU_RS13420	0.28	-0.4
3,031,752	-		PFLU_RS13420	0.29	+1.6
3,031,752	-		PFLU_RS13420	0.29	-0.2
3,031,752	-		PFLU_RS13420	0.29	+0.6
3,031,752	-		PFLU_RS13420	0.29	+2.0
3,031,752	-		PFLU_RS13420	0.29	-0.8
3,031,957	+		PFLU_RS13420	0.69	-2.0
3,031,957	+		PFLU_RS13420	0.69	+0.6
3,031,958	-		PFLU_RS13420	0.70	+0.8
3,032,015	+		PFLU_RS13420	0.81	-0.1
3,032,016	-		PFLU_RS13420	0.81	-1.3
3,032,016	-		PFLU_RS13420	0.81	+1.6
3,032,080	+				+0.4
3,032,080	+				-1.5
3,032,081	-				+0.2
3,032,081	-				-1.2
3,032,081	-				-1.2
3,032,081	-				+0.5
3,032,108	-				-0.2
3,032,108	-				-1.1
3,032,120	-				+0.3
3,032,125	-				+0.6
3,032,156	+				-0.5
3,032,157	-				+0.7
3,032,157	-				-0.7
3,032,157	-				+0.0
3,032,228	-				+0.4
3,032,228	-				+0.0
3,032,249	+				-1.7
3,032,250	-				+1.6
3,032,250	-				-0.2
3,032,250	-				-0.4
3,032,260	+				+0.7
3,032,260	+				+0.3
3,032,260	+				+0.6
3,032,260	+				+0.1
3,032,260	+				-1.0
3,032,261	-				+0.5
3,032,261	-				-0.7
3,032,261	-				-0.7
3,032,261	-				-0.8
3,032,261	-				+1.9
3,032,261	-				-0.8
3,032,303	+				+0.3
3,032,303	+				+0.5
3,032,303	+				-0.4
3,032,304	-				-0.8
3,032,373	+				+1.5
3,032,374	-				-0.3
3,032,585	-		PFLU_RS13425	0.19	-0.5
3,032,585	-		PFLU_RS13425	0.19	+1.8
3,032,585	-		PFLU_RS13425	0.19	+1.6
3,032,587	+		PFLU_RS13425	0.19	+2.0
3,032,587	+		PFLU_RS13425	0.19	-1.0
3,032,587	+		PFLU_RS13425	0.19	+0.3
3,032,587	+		PFLU_RS13425	0.19	-0.2
3,032,587	+		PFLU_RS13425	0.19	-0.2
3,032,587	+		PFLU_RS13425	0.19	+1.2
3,032,587	+		PFLU_RS13425	0.19	-0.9
3,032,587	+		PFLU_RS13425	0.19	+0.9
3,032,587	+		PFLU_RS13425	0.19	-1.1
3,032,588	-		PFLU_RS13425	0.19	+1.3
3,032,588	-		PFLU_RS13425	0.19	+0.4
3,032,588	-		PFLU_RS13425	0.19	+0.6
3,032,588	-		PFLU_RS13425	0.19	-0.7
3,032,588	-		PFLU_RS13425	0.19	-0.3
3,032,588	-		PFLU_RS13425	0.19	-0.3
3,032,588	-		PFLU_RS13425	0.19	-1.1
3,032,588	-		PFLU_RS13425	0.19	-0.1
3,032,588	-		PFLU_RS13425	0.19	-0.5
3,032,588	-		PFLU_RS13425	0.19	+0.2
3,032,588	-		PFLU_RS13425	0.19	+0.6
3,032,588	-		PFLU_RS13425	0.19	+1.9
3,032,728	+		PFLU_RS13425	0.30	-1.0
3,032,729	-		PFLU_RS13425	0.30	-1.0
3,032,824	+		PFLU_RS13425	0.37	-0.1
3,033,129	+		PFLU_RS13425	0.60	+0.6
3,033,129	+		PFLU_RS13425	0.60	-0.5
3,033,130	-		PFLU_RS13425	0.60	+2.6
3,033,130	-		PFLU_RS13425	0.60	+0.9
3,033,130	-		PFLU_RS13425	0.60	+0.6
3,033,376	+		PFLU_RS13425	0.79	-0.2
3,033,376	+		PFLU_RS13425	0.79	+0.3
3,033,376	+		PFLU_RS13425	0.79	-0.4
3,033,376	+		PFLU_RS13425	0.79	-0.8
3,033,376	+		PFLU_RS13425	0.79	-1.5
3,033,376	+		PFLU_RS13425	0.79	+1.3
3,033,376	+		PFLU_RS13425	0.79	-1.4
3,033,377	-		PFLU_RS13425	0.79	-0.4
3,033,377	-		PFLU_RS13425	0.79	-0.1
3,033,377	-		PFLU_RS13425	0.79	+2.0
3,033,377	-		PFLU_RS13425	0.79	+0.9
3,033,662	+				-0.5
3,033,942	-				-0.6
3,033,942	-				-0.2
3,033,942	-				+1.5
3,033,942	-				+0.0
3,034,026	+		PFLU_RS13430	0.12	-0.2
3,034,026	+		PFLU_RS13430	0.12	+1.5
3,034,027	-		PFLU_RS13430	0.12	-1.7
3,034,027	-		PFLU_RS13430	0.12	-0.3
3,034,027	-		PFLU_RS13430	0.12	-1.0
3,034,027	-		PFLU_RS13430	0.12	+0.8
3,034,082	+		PFLU_RS13430	0.14	-0.7
3,034,082	+		PFLU_RS13430	0.14	-0.1
3,034,082	+		PFLU_RS13430	0.14	-0.7
3,034,082	+		PFLU_RS13430	0.14	-0.8
3,034,083	-		PFLU_RS13430	0.14	-1.1
3,034,083	-		PFLU_RS13430	0.14	+0.3
3,034,362	+		PFLU_RS13430	0.23	+0.6
3,034,363	-		PFLU_RS13430	0.23	-0.4
3,034,384	-		PFLU_RS13430	0.24	+0.0
3,034,384	-		PFLU_RS13430	0.24	+0.7
3,034,409	+		PFLU_RS13430	0.25	+0.4
3,034,410	-		PFLU_RS13430	0.25	-0.6
3,034,538	+		PFLU_RS13430	0.29	+0.6
3,034,539	-		PFLU_RS13430	0.29	-1.1
3,034,539	-		PFLU_RS13430	0.29	+1.0
3,034,559	+		PFLU_RS13430	0.30	+0.2
3,034,559	+		PFLU_RS13430	0.30	+0.9
3,034,559	+		PFLU_RS13430	0.30	-1.2
3,034,560	-		PFLU_RS13430	0.30	+0.6
3,034,634	-		PFLU_RS13430	0.32	-0.0