Experiment: D-Glucose (C) 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS13305 and PFLU_RS13310 are separated by 50 nucleotides PFLU_RS13310 and PFLU_RS13315 are separated by 138 nucleotides PFLU_RS13315 and PFLU_RS13320 are separated by 91 nucleotides
PFLU_RS13305: PFLU_RS13305 - sigma-70 family RNA polymerase sigma factor, at 3,009,076 to 3,009,591
_RS13305
PFLU_RS13310: PFLU_RS13310 - DUF3455 domain-containing protein, at 3,009,642 to 3,010,163
_RS13310
PFLU_RS13315: PFLU_RS13315 - class I SAM-dependent methyltransferase, at 3,010,302 to 3,011,072
_RS13315
PFLU_RS13320: PFLU_RS13320 - sulfite exporter TauE/SafE family protein, at 3,011,164 to 3,011,949
_RS13320
Position (kb)
3010
3011
3012 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3009.333 kb on + strand, within PFLU_RS13305 at 3009.334 kb on - strand, within PFLU_RS13305 at 3009.453 kb on + strand, within PFLU_RS13305 at 3009.483 kb on + strand, within PFLU_RS13305 at 3009.582 kb on - strand at 3009.582 kb on - strand at 3009.635 kb on + strand at 3009.635 kb on + strand at 3009.635 kb on + strand at 3009.635 kb on + strand at 3009.635 kb on + strand at 3009.635 kb on + strand at 3009.636 kb on - strand at 3009.636 kb on - strand at 3009.636 kb on - strand at 3009.636 kb on - strand at 3009.636 kb on - strand at 3009.636 kb on - strand at 3009.636 kb on - strand at 3009.664 kb on + strand at 3009.664 kb on + strand at 3009.664 kb on + strand at 3009.664 kb on + strand at 3009.664 kb on + strand at 3009.664 kb on + strand at 3009.664 kb on + strand at 3009.664 kb on + strand at 3009.664 kb on + strand at 3009.665 kb on - strand at 3009.665 kb on - strand at 3009.665 kb on - strand at 3009.665 kb on - strand at 3009.665 kb on - strand at 3009.665 kb on - strand at 3009.665 kb on - strand at 3009.665 kb on - strand at 3009.676 kb on + strand at 3009.676 kb on + strand at 3009.676 kb on + strand at 3009.676 kb on + strand at 3009.677 kb on - strand at 3009.677 kb on - strand at 3009.732 kb on + strand, within PFLU_RS13310 at 3009.732 kb on + strand, within PFLU_RS13310 at 3009.733 kb on - strand, within PFLU_RS13310 at 3009.744 kb on + strand, within PFLU_RS13310 at 3009.744 kb on + strand, within PFLU_RS13310 at 3009.744 kb on + strand, within PFLU_RS13310 at 3009.744 kb on + strand, within PFLU_RS13310 at 3009.745 kb on - strand, within PFLU_RS13310 at 3009.763 kb on + strand, within PFLU_RS13310 at 3009.763 kb on + strand, within PFLU_RS13310 at 3009.763 kb on + strand, within PFLU_RS13310 at 3009.763 kb on + strand, within PFLU_RS13310 at 3009.764 kb on - strand, within PFLU_RS13310 at 3009.764 kb on - strand, within PFLU_RS13310 at 3009.764 kb on - strand, within PFLU_RS13310 at 3009.820 kb on + strand, within PFLU_RS13310 at 3009.916 kb on + strand, within PFLU_RS13310 at 3009.916 kb on + strand, within PFLU_RS13310 at 3009.916 kb on + strand, within PFLU_RS13310 at 3009.916 kb on + strand, within PFLU_RS13310 at 3009.916 kb on + strand, within PFLU_RS13310 at 3009.916 kb on + strand, within PFLU_RS13310 at 3009.917 kb on - strand, within PFLU_RS13310 at 3009.917 kb on - strand, within PFLU_RS13310 at 3009.917 kb on - strand, within PFLU_RS13310 at 3009.917 kb on - strand, within PFLU_RS13310 at 3009.917 kb on - strand, within PFLU_RS13310 at 3009.917 kb on - strand, within PFLU_RS13310 at 3010.019 kb on - strand, within PFLU_RS13310 at 3010.019 kb on - strand, within PFLU_RS13310 at 3010.019 kb on - strand, within PFLU_RS13310 at 3010.019 kb on - strand, within PFLU_RS13310 at 3010.155 kb on - strand at 3010.167 kb on + strand at 3010.167 kb on + strand at 3010.167 kb on + strand at 3010.167 kb on + strand at 3010.167 kb on + strand at 3010.167 kb on + strand at 3010.167 kb on + strand at 3010.167 kb on + strand at 3010.168 kb on - strand at 3010.168 kb on - strand at 3010.168 kb on - strand at 3010.168 kb on - strand at 3010.168 kb on - strand at 3010.168 kb on - strand at 3010.168 kb on - strand at 3010.168 kb on - strand at 3010.184 kb on - strand at 3010.184 kb on - strand at 3010.209 kb on + strand at 3010.210 kb on - strand at 3010.356 kb on + strand at 3010.357 kb on - strand at 3010.836 kb on + strand, within PFLU_RS13315 at 3010.836 kb on + strand, within PFLU_RS13315 at 3010.837 kb on - strand, within PFLU_RS13315 at 3010.837 kb on - strand, within PFLU_RS13315 at 3010.837 kb on - strand, within PFLU_RS13315 at 3010.837 kb on - strand, within PFLU_RS13315 at 3010.869 kb on + strand, within PFLU_RS13315 at 3010.929 kb on - strand, within PFLU_RS13315 at 3011.049 kb on + strand at 3011.049 kb on + strand at 3011.049 kb on + strand at 3011.049 kb on + strand at 3011.049 kb on + strand at 3011.049 kb on + strand at 3011.049 kb on + strand at 3011.050 kb on - strand at 3011.050 kb on - strand at 3011.050 kb on - strand at 3011.050 kb on - strand at 3011.050 kb on - strand at 3011.050 kb on - strand at 3011.050 kb on - strand at 3011.050 kb on - strand at 3011.071 kb on - strand at 3011.071 kb on - strand at 3011.092 kb on + strand at 3011.093 kb on - strand at 3011.098 kb on + strand at 3011.098 kb on + strand at 3011.098 kb on + strand at 3011.098 kb on + strand at 3011.098 kb on + strand at 3011.099 kb on - strand at 3011.100 kb on + strand at 3011.101 kb on - strand at 3011.101 kb on - strand at 3011.108 kb on + strand at 3011.109 kb on - strand at 3011.142 kb on + strand at 3011.142 kb on + strand at 3011.143 kb on - strand at 3011.144 kb on + strand at 3011.156 kb on + strand at 3011.156 kb on + strand at 3011.171 kb on + strand at 3011.171 kb on + strand at 3011.171 kb on + strand at 3011.171 kb on + strand at 3011.171 kb on + strand at 3011.171 kb on + strand at 3011.171 kb on + strand at 3011.171 kb on + strand at 3011.171 kb on + strand at 3011.171 kb on + strand at 3011.171 kb on + strand at 3011.171 kb on + strand at 3011.171 kb on + strand at 3011.171 kb on + strand at 3011.171 kb on + strand at 3011.171 kb on + strand at 3011.171 kb on + strand at 3011.171 kb on + strand at 3011.171 kb on + strand at 3011.171 kb on + strand at 3011.171 kb on + strand at 3011.171 kb on + strand at 3011.171 kb on + strand at 3011.172 kb on - strand at 3011.172 kb on - strand at 3011.172 kb on - strand at 3011.172 kb on - strand at 3011.172 kb on - strand at 3011.172 kb on - strand at 3011.172 kb on - strand at 3011.172 kb on - strand at 3011.172 kb on - strand at 3011.172 kb on - strand at 3011.172 kb on - strand at 3011.172 kb on - strand at 3011.172 kb on - strand at 3011.175 kb on + strand at 3011.175 kb on + strand at 3011.175 kb on + strand at 3011.175 kb on + strand at 3011.175 kb on + strand at 3011.175 kb on + strand at 3011.175 kb on + strand at 3011.176 kb on - strand at 3011.176 kb on - strand at 3011.176 kb on - strand at 3011.176 kb on - strand at 3011.176 kb on - strand at 3011.176 kb on - strand at 3011.176 kb on - strand at 3011.176 kb on - strand at 3011.176 kb on - strand at 3011.176 kb on - strand at 3011.215 kb on - strand at 3011.219 kb on + strand at 3011.220 kb on - strand at 3011.220 kb on - strand at 3011.314 kb on + strand, within PFLU_RS13320 at 3011.315 kb on - strand, within PFLU_RS13320 at 3011.315 kb on - strand, within PFLU_RS13320 at 3011.315 kb on - strand, within PFLU_RS13320 at 3011.315 kb on - strand, within PFLU_RS13320 at 3011.315 kb on - strand, within PFLU_RS13320 at 3011.578 kb on + strand, within PFLU_RS13320 at 3011.578 kb on + strand, within PFLU_RS13320 at 3011.578 kb on + strand, within PFLU_RS13320 at 3011.579 kb on - strand, within PFLU_RS13320 at 3011.694 kb on + strand, within PFLU_RS13320 at 3011.694 kb on + strand, within PFLU_RS13320 at 3011.695 kb on - strand, within PFLU_RS13320 at 3011.695 kb on - strand, within PFLU_RS13320 at 3011.695 kb on - strand, within PFLU_RS13320 at 3011.695 kb on - strand, within PFLU_RS13320 at 3011.851 kb on + strand, within PFLU_RS13320 at 3011.851 kb on + strand, within PFLU_RS13320 at 3011.851 kb on + strand, within PFLU_RS13320 at 3011.851 kb on + strand, within PFLU_RS13320 at 3011.851 kb on + strand, within PFLU_RS13320 at 3011.851 kb on + strand, within PFLU_RS13320 at 3011.851 kb on + strand, within PFLU_RS13320 at 3011.851 kb on + strand, within PFLU_RS13320 at 3011.851 kb on + strand, within PFLU_RS13320 at 3011.851 kb on + strand, within PFLU_RS13320 at 3011.851 kb on + strand, within PFLU_RS13320 at 3011.851 kb on + strand, within PFLU_RS13320 at 3011.851 kb on + strand, within PFLU_RS13320 at 3011.851 kb on + strand, within PFLU_RS13320 at 3011.851 kb on + strand, within PFLU_RS13320 at 3011.851 kb on + strand, within PFLU_RS13320 at 3011.851 kb on + strand, within PFLU_RS13320 at 3011.852 kb on - strand, within PFLU_RS13320 at 3011.852 kb on - strand, within PFLU_RS13320 at 3011.852 kb on - strand, within PFLU_RS13320 at 3011.852 kb on - strand, within PFLU_RS13320 at 3011.852 kb on - strand, within PFLU_RS13320 at 3011.852 kb on - strand, within PFLU_RS13320 at 3011.852 kb on - strand, within PFLU_RS13320 at 3011.852 kb on - strand, within PFLU_RS13320 at 3011.852 kb on - strand, within PFLU_RS13320 at 3011.852 kb on - strand, within PFLU_RS13320 at 3011.852 kb on - strand, within PFLU_RS13320 at 3011.852 kb on - strand, within PFLU_RS13320 at 3011.852 kb on - strand, within PFLU_RS13320 at 3011.852 kb on - strand, within PFLU_RS13320 at 3011.852 kb on - strand, within PFLU_RS13320 at 3011.852 kb on - strand, within PFLU_RS13320 at 3011.852 kb on - strand, within PFLU_RS13320 at 3011.865 kb on + strand, within PFLU_RS13320 at 3011.865 kb on + strand, within PFLU_RS13320 at 3011.865 kb on + strand, within PFLU_RS13320 at 3011.865 kb on + strand, within PFLU_RS13320 at 3011.865 kb on + strand, within PFLU_RS13320 at 3011.866 kb on - strand, within PFLU_RS13320 at 3011.866 kb on - strand, within PFLU_RS13320 at 3011.866 kb on - strand, within PFLU_RS13320 at 3011.866 kb on - strand, within PFLU_RS13320 at 3011.972 kb on + strand at 3011.972 kb on + strand at 3011.972 kb on + strand at 3011.972 kb on + strand at 3011.972 kb on + strand at 3011.972 kb on + strand at 3011.973 kb on - strand at 3011.973 kb on - strand at 3011.973 kb on - strand at 3011.973 kb on - strand at 3011.973 kb on - strand at 3011.981 kb on + strand at 3011.981 kb on + strand at 3011.982 kb on - strand at 3011.982 kb on - strand at 3012.012 kb on + strand at 3012.013 kb on - strand at 3012.013 kb on - strand at 3012.041 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) 3 mM remove 3,009,333 + PFLU_RS13305 0.50 +1.0 3,009,334 - PFLU_RS13305 0.50 +0.0 3,009,453 + PFLU_RS13305 0.73 -2.7 3,009,483 + PFLU_RS13305 0.79 -0.5 3,009,582 - +1.0 3,009,582 - +0.8 3,009,635 + -0.4 3,009,635 + -1.3 3,009,635 + +0.2 3,009,635 + +0.0 3,009,635 + +0.0 3,009,635 + +0.4 3,009,636 - +0.7 3,009,636 - -0.3 3,009,636 - +0.9 3,009,636 - +0.5 3,009,636 - -1.1 3,009,636 - +1.6 3,009,636 - +1.6 3,009,664 + -0.6 3,009,664 + +1.6 3,009,664 + +0.1 3,009,664 + +1.6 3,009,664 + -0.1 3,009,664 + +0.1 3,009,664 + +0.6 3,009,664 + +0.3 3,009,664 + +2.9 3,009,665 - +1.3 3,009,665 - +1.0 3,009,665 - +0.0 3,009,665 - +0.2 3,009,665 - -0.1 3,009,665 - +1.0 3,009,665 - -0.3 3,009,665 - -0.1 3,009,676 + -1.0 3,009,676 + +0.0 3,009,676 + -0.6 3,009,676 + -0.5 3,009,677 - -0.4 3,009,677 - +0.7 3,009,732 + PFLU_RS13310 0.17 +0.6 3,009,732 + PFLU_RS13310 0.17 -0.5 3,009,733 - PFLU_RS13310 0.17 +1.3 3,009,744 + PFLU_RS13310 0.20 +0.4 3,009,744 + PFLU_RS13310 0.20 +0.0 3,009,744 + PFLU_RS13310 0.20 -0.1 3,009,744 + PFLU_RS13310 0.20 -2.2 3,009,745 - PFLU_RS13310 0.20 +0.5 3,009,763 + PFLU_RS13310 0.23 +0.9 3,009,763 + PFLU_RS13310 0.23 -0.3 3,009,763 + PFLU_RS13310 0.23 -0.8 3,009,763 + PFLU_RS13310 0.23 -0.7 3,009,764 - PFLU_RS13310 0.23 -0.2 3,009,764 - PFLU_RS13310 0.23 -0.3 3,009,764 - PFLU_RS13310 0.23 -0.6 3,009,820 + PFLU_RS13310 0.34 +0.5 3,009,916 + PFLU_RS13310 0.52 +0.9 3,009,916 + PFLU_RS13310 0.52 +0.4 3,009,916 + PFLU_RS13310 0.52 -1.3 3,009,916 + PFLU_RS13310 0.52 -0.1 3,009,916 + PFLU_RS13310 0.52 -0.1 3,009,916 + PFLU_RS13310 0.52 +0.1 3,009,917 - PFLU_RS13310 0.53 -0.3 3,009,917 - PFLU_RS13310 0.53 -2.4 3,009,917 - PFLU_RS13310 0.53 +1.6 3,009,917 - PFLU_RS13310 0.53 -0.3 3,009,917 - PFLU_RS13310 0.53 -2.2 3,009,917 - PFLU_RS13310 0.53 +0.6 3,010,019 - PFLU_RS13310 0.72 +1.6 3,010,019 - PFLU_RS13310 0.72 +0.3 3,010,019 - PFLU_RS13310 0.72 +0.8 3,010,019 - PFLU_RS13310 0.72 +0.4 3,010,155 - +1.6 3,010,167 + +0.1 3,010,167 + +1.6 3,010,167 + +1.4 3,010,167 + -1.3 3,010,167 + -0.3 3,010,167 + +2.6 3,010,167 + +0.0 3,010,167 + +0.1 3,010,168 - +1.6 3,010,168 - +1.6 3,010,168 - +0.4 3,010,168 - +0.4 3,010,168 - +1.6 3,010,168 - +0.8 3,010,168 - -0.8 3,010,168 - +0.3 3,010,184 - -1.4 3,010,184 - +0.4 3,010,209 + +1.3 3,010,210 - -0.4 3,010,356 + -0.3 3,010,357 - -0.7 3,010,836 + PFLU_RS13315 0.69 +2.1 3,010,836 + PFLU_RS13315 0.69 +0.8 3,010,837 - PFLU_RS13315 0.69 +0.1 3,010,837 - PFLU_RS13315 0.69 -0.6 3,010,837 - PFLU_RS13315 0.69 -1.0 3,010,837 - PFLU_RS13315 0.69 -0.6 3,010,869 + PFLU_RS13315 0.74 +1.4 3,010,929 - PFLU_RS13315 0.81 -0.5 3,011,049 + -0.9 3,011,049 + +0.0 3,011,049 + +0.0 3,011,049 + -0.9 3,011,049 + -1.7 3,011,049 + +0.8 3,011,049 + +1.9 3,011,050 - +0.5 3,011,050 - +0.7 3,011,050 - -0.7 3,011,050 - +0.2 3,011,050 - +1.2 3,011,050 - -0.4 3,011,050 - -0.1 3,011,050 - +0.5 3,011,071 - +0.0 3,011,071 - +0.4 3,011,092 + +0.1 3,011,093 - +0.6 3,011,098 + -1.0 3,011,098 + +0.8 3,011,098 + +1.0 3,011,098 + +0.6 3,011,098 + +0.5 3,011,099 - +0.6 3,011,100 + +0.5 3,011,101 - +0.1 3,011,101 - +0.3 3,011,108 + +0.0 3,011,109 - +0.6 3,011,142 + +2.6 3,011,142 + +0.7 3,011,143 - -1.1 3,011,144 + -0.9 3,011,156 + +0.6 3,011,156 + +0.9 3,011,171 + +0.6 3,011,171 + +1.8 3,011,171 + +0.2 3,011,171 + -0.5 3,011,171 + +0.3 3,011,171 + -0.5 3,011,171 + +0.2 3,011,171 + +0.5 3,011,171 + +1.0 3,011,171 + -0.3 3,011,171 + +0.9 3,011,171 + -0.4 3,011,171 + +0.7 3,011,171 + +0.3 3,011,171 + +1.0 3,011,171 + -0.6 3,011,171 + -1.6 3,011,171 + -0.8 3,011,171 + +1.4 3,011,171 + -0.4 3,011,171 + -0.8 3,011,171 + -2.2 3,011,171 + -0.2 3,011,172 - +1.8 3,011,172 - -2.9 3,011,172 - +1.6 3,011,172 - +0.9 3,011,172 - -2.6 3,011,172 - -0.4 3,011,172 - +1.1 3,011,172 - -0.7 3,011,172 - -0.8 3,011,172 - -1.4 3,011,172 - -0.4 3,011,172 - -3.1 3,011,172 - +0.5 3,011,175 + +1.0 3,011,175 + +0.9 3,011,175 + -0.5 3,011,175 + +0.3 3,011,175 + -1.5 3,011,175 + +0.6 3,011,175 + +0.0 3,011,176 - +0.1 3,011,176 - +1.6 3,011,176 - -2.0 3,011,176 - +1.6 3,011,176 - +0.0 3,011,176 - +0.6 3,011,176 - +0.2 3,011,176 - -0.2 3,011,176 - +0.1 3,011,176 - -0.0 3,011,215 - +0.1 3,011,219 + -0.9 3,011,220 - +0.2 3,011,220 - -0.6 3,011,314 + PFLU_RS13320 0.19 +0.7 3,011,315 - PFLU_RS13320 0.19 -0.4 3,011,315 - PFLU_RS13320 0.19 -1.1 3,011,315 - PFLU_RS13320 0.19 +0.5 3,011,315 - PFLU_RS13320 0.19 +1.2 3,011,315 - PFLU_RS13320 0.19 -0.2 3,011,578 + PFLU_RS13320 0.53 +0.0 3,011,578 + PFLU_RS13320 0.53 -0.1 3,011,578 + PFLU_RS13320 0.53 +0.0 3,011,579 - PFLU_RS13320 0.53 +0.4 3,011,694 + PFLU_RS13320 0.67 +0.5 3,011,694 + PFLU_RS13320 0.67 -0.1 3,011,695 - PFLU_RS13320 0.68 -0.2 3,011,695 - PFLU_RS13320 0.68 +0.0 3,011,695 - PFLU_RS13320 0.68 +1.1 3,011,695 - PFLU_RS13320 0.68 +1.4 3,011,851 + PFLU_RS13320 0.87 +1.1 3,011,851 + PFLU_RS13320 0.87 -0.9 3,011,851 + PFLU_RS13320 0.87 +0.1 3,011,851 + PFLU_RS13320 0.87 -1.2 3,011,851 + PFLU_RS13320 0.87 +0.4 3,011,851 + PFLU_RS13320 0.87 -0.0 3,011,851 + PFLU_RS13320 0.87 +0.2 3,011,851 + PFLU_RS13320 0.87 +0.3 3,011,851 + PFLU_RS13320 0.87 +0.1 3,011,851 + PFLU_RS13320 0.87 +0.9 3,011,851 + PFLU_RS13320 0.87 +1.8 3,011,851 + PFLU_RS13320 0.87 +0.0 3,011,851 + PFLU_RS13320 0.87 +0.0 3,011,851 + PFLU_RS13320 0.87 +0.5 3,011,851 + PFLU_RS13320 0.87 -0.4 3,011,851 + PFLU_RS13320 0.87 -1.2 3,011,851 + PFLU_RS13320 0.87 -0.4 3,011,852 - PFLU_RS13320 0.88 +1.1 3,011,852 - PFLU_RS13320 0.88 +1.2 3,011,852 - PFLU_RS13320 0.88 +1.2 3,011,852 - PFLU_RS13320 0.88 -0.6 3,011,852 - PFLU_RS13320 0.88 -2.8 3,011,852 - PFLU_RS13320 0.88 -0.0 3,011,852 - PFLU_RS13320 0.88 -0.7 3,011,852 - PFLU_RS13320 0.88 +1.2 3,011,852 - PFLU_RS13320 0.88 +0.0 3,011,852 - PFLU_RS13320 0.88 +1.4 3,011,852 - PFLU_RS13320 0.88 +0.3 3,011,852 - PFLU_RS13320 0.88 +0.4 3,011,852 - PFLU_RS13320 0.88 +1.6 3,011,852 - PFLU_RS13320 0.88 +0.1 3,011,852 - PFLU_RS13320 0.88 +0.0 3,011,852 - PFLU_RS13320 0.88 -1.1 3,011,852 - PFLU_RS13320 0.88 +0.9 3,011,865 + PFLU_RS13320 0.89 -0.3 3,011,865 + PFLU_RS13320 0.89 -0.7 3,011,865 + PFLU_RS13320 0.89 +0.6 3,011,865 + PFLU_RS13320 0.89 +0.0 3,011,865 + PFLU_RS13320 0.89 +0.3 3,011,866 - PFLU_RS13320 0.89 -1.9 3,011,866 - PFLU_RS13320 0.89 -0.9 3,011,866 - PFLU_RS13320 0.89 +2.4 3,011,866 - PFLU_RS13320 0.89 +0.1 3,011,972 + +0.3 3,011,972 + +0.9 3,011,972 + -0.4 3,011,972 + -1.1 3,011,972 + -1.7 3,011,972 + +1.2 3,011,973 - -1.1 3,011,973 - -0.4 3,011,973 - -2.0 3,011,973 - -0.3 3,011,973 - -1.0 3,011,981 + -1.1 3,011,981 + +0.2 3,011,982 - +0.0 3,011,982 - +2.9 3,012,012 + +1.2 3,012,013 - -1.0 3,012,013 - +0.4 3,012,041 + -0.7
Or see this region's nucleotide sequence