Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS09515

Experiment: D-Glucose (C) 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 3 mM
2,103,754	+		PFLU_RS09510	0.64	+1.4
2,103,755	-		PFLU_RS09510	0.64	-1.0
2,103,755	-		PFLU_RS09510	0.64	-0.9
2,103,755	-		PFLU_RS09510	0.64	+1.8
2,103,994	-		PFLU_RS09510	0.72	+0.5
2,103,998	+		PFLU_RS09510	0.73	-0.2
2,104,074	+		PFLU_RS09510	0.75	+1.0
2,104,074	+		PFLU_RS09510	0.75	-0.5
2,104,074	+		PFLU_RS09510	0.75	-0.7
2,104,075	-		PFLU_RS09510	0.75	-0.0
2,104,075	-		PFLU_RS09510	0.75	-0.8
2,104,075	-		PFLU_RS09510	0.75	+1.0
2,104,075	-		PFLU_RS09510	0.75	+1.8
2,104,075	-		PFLU_RS09510	0.75	-0.2
2,104,075	-		PFLU_RS09510	0.75	-1.2
2,104,075	-		PFLU_RS09510	0.75	+0.7
2,104,075	-		PFLU_RS09510	0.75	+0.6
2,104,076	+		PFLU_RS09510	0.75	+0.6
2,104,076	+		PFLU_RS09510	0.75	+0.0
2,104,076	+		PFLU_RS09510	0.75	+1.4
2,104,076	+		PFLU_RS09510	0.75	-0.1
2,104,076	+		PFLU_RS09510	0.75	-0.1
2,104,076	+		PFLU_RS09510	0.75	+0.5
2,104,077	-		PFLU_RS09510	0.75	+0.6
2,104,077	-		PFLU_RS09510	0.75	+1.8
2,104,077	-		PFLU_RS09510	0.75	-0.4
2,104,077	-		PFLU_RS09510	0.75	-0.8
2,104,077	-		PFLU_RS09510	0.75	+0.9
2,104,077	-		PFLU_RS09510	0.75	+0.8
2,104,077	-		PFLU_RS09510	0.75	-0.4
2,104,077	-		PFLU_RS09510	0.75	+0.6
2,104,077	-		PFLU_RS09510	0.75	+0.2
2,104,077	-		PFLU_RS09510	0.75	-1.1
2,104,077	-		PFLU_RS09510	0.75	-0.3
2,104,077	-		PFLU_RS09510	0.75	+0.5
2,104,135	+		PFLU_RS09510	0.78	-2.2
2,104,329	+		PFLU_RS09510	0.85	+0.5
2,104,329	+		PFLU_RS09510	0.85	-0.0
2,104,330	-		PFLU_RS09510	0.85	-1.3
2,104,370	-		PFLU_RS09510	0.86	+0.6
2,104,370	-		PFLU_RS09510	0.86	-0.2
2,104,371	+		PFLU_RS09510	0.86	+0.9
2,104,371	+		PFLU_RS09510	0.86	+0.3
2,104,371	+		PFLU_RS09510	0.86	-1.3
2,104,372	-		PFLU_RS09510	0.86	+0.2
2,104,372	-		PFLU_RS09510	0.86	-0.9
2,104,372	-		PFLU_RS09510	0.86	-0.0
2,104,372	-		PFLU_RS09510	0.86	+0.6
2,104,393	-		PFLU_RS09510	0.87	+0.1
2,104,465	+		PFLU_RS09510	0.90	-0.2
2,104,466	-		PFLU_RS09510	0.90	+0.6
2,104,608	+				+0.5
2,104,653	+				+0.6
2,104,654	-				-0.8
2,104,751	+				-1.3
2,104,751	+				-1.3
2,104,751	+				+2.1
2,104,751	+				-0.5
2,104,751	+				+0.1
2,104,752	-				+0.8
2,104,752	-				-1.0
2,104,752	-				+1.1
2,104,752	-				+0.2
2,104,752	-				+0.4
2,104,784	+				+0.7
2,104,784	+				+0.6
2,104,784	+				+0.3
2,104,784	+				-0.1
2,104,785	-				-1.4
2,104,785	-				-0.3
2,104,799	+		PFLU_RS09515	0.12	-1.0
2,104,862	+		PFLU_RS09515	0.27	-0.5
2,104,862	+		PFLU_RS09515	0.27	+1.5
2,104,863	-		PFLU_RS09515	0.27	-1.2
2,104,868	+		PFLU_RS09515	0.28	-0.6
2,104,868	+		PFLU_RS09515	0.28	+1.8
2,104,868	+		PFLU_RS09515	0.28	-1.2
2,104,868	+		PFLU_RS09515	0.28	+1.2
2,104,868	+		PFLU_RS09515	0.28	-0.5
2,104,868	+		PFLU_RS09515	0.28	-1.5
2,104,868	+		PFLU_RS09515	0.28	+0.1
2,104,868	+		PFLU_RS09515	0.28	+0.3
2,104,869	-		PFLU_RS09515	0.29	+3.4
2,104,869	-		PFLU_RS09515	0.29	-0.9
2,104,869	-		PFLU_RS09515	0.29	+0.7
2,104,869	-		PFLU_RS09515	0.29	-0.5
2,104,869	-		PFLU_RS09515	0.29	+0.2
2,104,869	-		PFLU_RS09515	0.29	-0.9
2,104,876	+		PFLU_RS09515	0.30	+0.7
2,104,876	+		PFLU_RS09515	0.30	+0.1
2,104,876	+		PFLU_RS09515	0.30	+0.9
2,104,876	+		PFLU_RS09515	0.30	-1.0
2,104,877	-		PFLU_RS09515	0.30	-0.0
2,104,877	-		PFLU_RS09515	0.30	-1.2
2,104,877	-		PFLU_RS09515	0.30	-0.1
2,104,937	+		PFLU_RS09515	0.45	-0.6
2,104,937	+		PFLU_RS09515	0.45	-0.8
2,104,937	+		PFLU_RS09515	0.45	+0.8
2,105,049	+		PFLU_RS09515	0.72	+0.0
2,105,131	-				-0.5
2,105,193	+				+1.8
2,105,246	+				+0.5
2,105,247	-				+0.5
2,105,247	-				+0.4
2,105,247	-				+0.1
2,105,250	+				-0.5
2,105,250	+				-1.6
2,105,250	+				+0.3
2,105,250	+				+0.8
2,105,250	+				+1.0
2,105,251	-				-0.0
2,105,251	-				-0.1
2,105,251	-				-0.5
2,105,251	-				+0.5
2,105,251	-				+0.7
2,105,275	-				+0.8
2,105,275	-				-0.6
2,105,469	+		PFLU_RS09520	0.22	-2.3
2,105,469	+		PFLU_RS09520	0.22	+1.8
2,105,469	+		PFLU_RS09520	0.22	+0.1
2,105,470	-		PFLU_RS09520	0.22	+0.7
2,105,533	-		PFLU_RS09520	0.27	+0.7
2,105,533	-		PFLU_RS09520	0.27	+2.2
2,105,638	+		PFLU_RS09520	0.34	+1.2
2,105,650	+		PFLU_RS09520	0.34	+2.8
2,105,650	+		PFLU_RS09520	0.34	+1.2
2,105,650	+		PFLU_RS09520	0.34	-0.6
2,105,651	-		PFLU_RS09520	0.34	-0.2
2,105,651	-		PFLU_RS09520	0.34	-0.3
2,105,672	+		PFLU_RS09520	0.36	-2.5
2,105,777	+		PFLU_RS09520	0.43	-1.6
2,105,777	+		PFLU_RS09520	0.43	-1.1
2,105,778	-		PFLU_RS09520	0.43	+1.4
2,105,883	+		PFLU_RS09520	0.50	-2.0
2,105,883	+		PFLU_RS09520	0.50	+0.2
2,105,936	-		PFLU_RS09520	0.53	+0.3
2,105,936	-		PFLU_RS09520	0.53	-0.5
2,105,955	-		PFLU_RS09520	0.54	-0.4
2,106,161	+		PFLU_RS09520	0.68	-1.1