Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22725

Experiment: p-Coumaric (C) 1.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) 1.5 mM
5,116,671	+		PFLU_RS22715	0.73	+1.0
5,116,671	+		PFLU_RS22715	0.73	-0.1
5,116,671	+		PFLU_RS22715	0.73	+0.2
5,116,671	+		PFLU_RS22715	0.73	+0.8
5,116,672	-		PFLU_RS22715	0.73	-0.8
5,116,672	-		PFLU_RS22715	0.73	-2.0
5,116,672	-		PFLU_RS22715	0.73	-0.4
5,116,816	+		PFLU_RS22715	0.83	-0.1
5,116,816	+		PFLU_RS22715	0.83	-1.8
5,116,816	+		PFLU_RS22715	0.83	+1.1
5,116,816	+		PFLU_RS22715	0.83	+0.2
5,116,816	+		PFLU_RS22715	0.83	+2.3
5,116,817	-		PFLU_RS22715	0.83	-0.3
5,116,817	-		PFLU_RS22715	0.83	-0.4
5,116,817	-		PFLU_RS22715	0.83	+0.2
5,116,817	-		PFLU_RS22715	0.83	-0.6
5,116,839	+		PFLU_RS22715	0.85	+1.5
5,116,839	+		PFLU_RS22715	0.85	+2.3
5,116,839	+		PFLU_RS22715	0.85	-0.4
5,116,839	+		PFLU_RS22715	0.85	-0.0
5,116,839	+		PFLU_RS22715	0.85	-1.9
5,116,839	+		PFLU_RS22715	0.85	-0.2
5,116,840	-		PFLU_RS22715	0.85	+0.5
5,116,840	-		PFLU_RS22715	0.85	+0.8
5,116,840	-		PFLU_RS22715	0.85	+0.3
5,116,840	-		PFLU_RS22715	0.85	+0.8
5,116,840	-		PFLU_RS22715	0.85	+0.0
5,116,858	-		PFLU_RS22715	0.86	-1.0
5,116,858	-		PFLU_RS22715	0.86	+0.2
5,116,858	-		PFLU_RS22715	0.86	+0.9
5,116,858	-		PFLU_RS22715	0.86	-0.6
5,116,980	+				+1.1
5,116,980	+				-0.4
5,116,981	-				+1.1
5,116,981	-				-0.2
5,117,003	-				+0.0
5,117,014	+				-2.2
5,117,014	+				+0.3
5,117,014	+				+0.1
5,117,014	+				-0.9
5,117,014	+				-0.4
5,117,014	+				+0.6
5,117,014	+				+0.8
5,117,014	+				-1.1
5,117,014	+				-1.3
5,117,015	-				+2.0
5,117,015	-				+0.4
5,117,015	-				+0.8
5,117,015	-				+1.1
5,117,015	-				+0.2
5,117,015	-				+0.0
5,117,104	+				-1.5
5,117,104	+				-2.4
5,117,104	+				-2.8
5,117,104	+				-3.2
5,117,105	-				-0.2
5,117,105	-				+1.2
5,117,129	+				-3.3
5,117,130	-				+0.8
5,117,130	-				+1.0
5,117,130	-				+1.8
5,117,187	+				+0.8
5,117,187	+				+0.4
5,117,187	+				-1.2
5,117,187	+				-0.8
5,117,187	+				-0.7
5,117,187	+				-0.4
5,117,188	-				+0.3
5,117,188	-				+0.6
5,117,188	-				-1.4
5,117,188	-				-0.1
5,117,188	-				+0.4
5,117,188	-				-1.1
5,117,188	-				-1.3
5,117,188	-				-2.8
5,117,201	+				-1.2
5,117,235	+				-0.6
5,117,235	+				-0.1
5,117,235	+				+0.1
5,117,236	-				-0.6
5,117,286	-				+0.2
5,117,290	+				+1.8
5,117,290	+				+1.1
5,117,291	-				-0.2
5,117,291	-				+0.2
5,117,291	-				-0.6
5,117,291	-				+1.2
5,117,319	+		PFLU_RS22720	0.18	-0.7
5,117,320	-		PFLU_RS22720	0.18	+0.2
5,117,376	+		PFLU_RS22720	0.37	-0.1
5,117,376	+		PFLU_RS22720	0.37	+0.2
5,117,376	+		PFLU_RS22720	0.37	-1.6
5,117,376	+		PFLU_RS22720	0.37	-0.6
5,117,377	-		PFLU_RS22720	0.37	+0.7
5,117,377	-		PFLU_RS22720	0.37	-0.1
5,117,377	-		PFLU_RS22720	0.37	+0.5
5,117,377	-		PFLU_RS22720	0.37	+0.4
5,117,377	-		PFLU_RS22720	0.37	+1.0
5,117,408	+		PFLU_RS22720	0.47	-0.7
5,117,408	+		PFLU_RS22720	0.47	+1.0
5,117,408	+		PFLU_RS22720	0.47	+2.1
5,117,408	+		PFLU_RS22720	0.47	+0.4
5,117,408	+		PFLU_RS22720	0.47	-1.0
5,117,408	+		PFLU_RS22720	0.47	-0.5
5,117,408	+		PFLU_RS22720	0.47	+0.2
5,117,408	+		PFLU_RS22720	0.47	-0.0
5,117,408	+		PFLU_RS22720	0.47	-0.9
5,117,408	+		PFLU_RS22720	0.47	-1.1
5,117,409	-		PFLU_RS22720	0.48	+0.0
5,117,409	-		PFLU_RS22720	0.48	+0.4
5,117,409	-		PFLU_RS22720	0.48	-0.2
5,117,409	-		PFLU_RS22720	0.48	+0.0
5,117,409	-		PFLU_RS22720	0.48	-0.0
5,117,409	-		PFLU_RS22720	0.48	-0.6
5,117,409	-		PFLU_RS22720	0.48	-1.2
5,117,409	-		PFLU_RS22720	0.48	-1.7
5,117,409	-		PFLU_RS22720	0.48	+1.3
5,117,409	-		PFLU_RS22720	0.48	+0.8
5,117,409	-		PFLU_RS22720	0.48	-0.2
5,117,409	-		PFLU_RS22720	0.48	+0.2
5,117,426	+		PFLU_RS22720	0.53	+1.1
5,117,426	+		PFLU_RS22720	0.53	+0.8
5,117,426	+		PFLU_RS22720	0.53	-0.6
5,117,427	-		PFLU_RS22720	0.53	+3.1
5,117,443	+		PFLU_RS22720	0.59	-0.7
5,117,443	+		PFLU_RS22720	0.59	+0.4
5,117,443	+		PFLU_RS22720	0.59	-0.5
5,117,443	+		PFLU_RS22720	0.59	-1.4
5,117,443	+		PFLU_RS22720	0.59	-0.5
5,117,443	+		PFLU_RS22720	0.59	-0.2
5,117,443	+		PFLU_RS22720	0.59	+0.6
5,117,443	+		PFLU_RS22720	0.59	-0.9
5,117,443	+		PFLU_RS22720	0.59	+1.0
5,117,443	+		PFLU_RS22720	0.59	+0.4
5,117,443	+		PFLU_RS22720	0.59	-1.1
5,117,443	+		PFLU_RS22720	0.59	+1.1
5,117,444	-		PFLU_RS22720	0.59	-0.7
5,117,444	-		PFLU_RS22720	0.59	-1.1
5,117,444	-		PFLU_RS22720	0.59	-0.8
5,117,444	-		PFLU_RS22720	0.59	+0.4
5,117,444	-		PFLU_RS22720	0.59	+0.2
5,117,444	-		PFLU_RS22720	0.59	-0.2
5,117,444	-		PFLU_RS22720	0.59	-2.4
5,117,444	-		PFLU_RS22720	0.59	+0.8
5,117,467	-		PFLU_RS22720	0.67	-2.0
5,117,467	-		PFLU_RS22720	0.67	+1.5
5,117,473	+		PFLU_RS22720	0.69	-1.6
5,117,473	+		PFLU_RS22720	0.69	-0.5
5,117,473	+		PFLU_RS22720	0.69	+0.3
5,117,474	-		PFLU_RS22720	0.69	-1.4
5,117,491	-		PFLU_RS22720	0.75	-0.7
5,117,512	+		PFLU_RS22720	0.82	-0.0
5,117,512	+		PFLU_RS22720	0.82	+0.9
5,117,513	-		PFLU_RS22720	0.82	-0.2
5,117,513	-		PFLU_RS22720	0.82	+1.1
5,117,513	-		PFLU_RS22720	0.82	+1.8
5,117,513	-		PFLU_RS22720	0.82	+0.1
5,117,513	-		PFLU_RS22720	0.82	-1.1
5,117,513	-		PFLU_RS22720	0.82	+1.1
5,117,538	+				-0.6
5,117,538	+				+0.2
5,117,538	+				-0.1
5,117,538	+				+0.4
5,117,538	+				-0.2
5,117,539	-				-0.2
5,117,539	-				+0.0
5,117,539	-				-2.3
5,117,539	-				+0.1
5,117,581	+				+0.2
5,117,581	+				-0.6
5,117,581	+				-1.3
5,117,581	+				+0.8
5,117,581	+				-1.1
5,117,581	+				+0.2
5,117,581	+				-0.6
5,117,582	-				-0.8
5,117,582	-				+0.5
5,117,582	-				-0.2
5,117,582	-				-0.6
5,117,582	-				-0.6
5,117,582	-				-0.6
5,117,582	-				-0.8
5,117,582	-				-1.4
5,117,582	-				-0.2
5,117,582	-				-0.2
5,117,583	+				+0.2
5,117,583	+				-0.2
5,117,583	+				+2.8
5,117,583	+				-2.1
5,117,583	+				-1.7
5,117,583	+				-0.5
5,117,584	-				+1.2
5,117,584	-				+0.8
5,117,584	-				-2.1
5,117,584	-				+1.8
5,117,584	-				-1.0
5,117,584	-				-0.2
5,117,584	-				-0.0
5,117,699	+		PFLU_RS22725	0.37	-0.2
5,117,699	+		PFLU_RS22725	0.37	-0.6
5,117,700	-		PFLU_RS22725	0.37	-0.8
5,117,700	-		PFLU_RS22725	0.37	+2.8
5,117,700	-		PFLU_RS22725	0.37	-0.2
5,117,700	-		PFLU_RS22725	0.37	+1.8
5,117,800	+		PFLU_RS22725	0.65	-0.2
5,117,801	-		PFLU_RS22725	0.66	+0.8
5,117,801	-		PFLU_RS22725	0.66	-2.3
5,117,801	-		PFLU_RS22725	0.66	-1.6
5,117,897	+				+1.8
5,117,934	+				+0.5
5,117,934	+				-0.0
5,117,935	-				+0.7
5,117,945	+				-1.0
5,117,945	+				-0.2
5,117,945	+				-0.6
5,117,945	+				-0.0
5,117,981	-				+1.3
5,117,986	+				+1.1
5,117,986	+				+0.3
5,117,986	+				+0.5
5,117,986	+				+1.0
5,117,986	+				+0.5
5,117,986	+				+0.2
5,117,986	+				-0.2
5,117,986	+				+0.4
5,117,986	+				-0.0
5,117,986	+				-0.4
5,117,986	+				+0.1
5,117,986	+				-0.4
5,117,986	+				+0.2
5,117,986	+				-0.6
5,117,986	+				+0.8
5,117,986	+				-1.5
5,117,986	+				-1.3
5,117,986	+				-0.9
5,117,987	-				-1.8
5,117,987	-				+0.6
5,117,987	-				-0.9
5,117,987	-				-1.5
5,117,987	-				-1.6
5,117,987	-				-0.8
5,117,987	-				+0.2
5,117,987	-				-1.2
5,117,987	-				-1.4
5,117,987	-				+0.5
5,117,987	-				-0.4
5,117,987	-				-0.5
5,117,987	-				-0.4
5,117,987	-				-0.1
5,117,987	-				-0.7
5,117,987	-				-0.7
5,117,987	-				+2.8
5,117,987	-				-0.8
5,117,987	-				+0.6
5,117,987	-				-0.2
5,117,987	-				+1.8