Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0657 and Psest_0658 overlap by 11 nucleotides Psest_0658 and Psest_0659 are separated by 1 nucleotides Psest_0659 and Psest_0660 are separated by 22 nucleotides Psest_0660 and Psest_0661 are separated by 261 nucleotides
Psest_0657: Psest_0657 - Chemotaxis protein histidine kinase and related kinases, at 714,123 to 716,369
_0657
Psest_0658: Psest_0658 - Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor), at 716,359 to 716,700
_0658
Psest_0659: Psest_0659 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 716,702 to 717,067
_0659
Psest_0660: Psest_0660 - Methyl-accepting chemotaxis protein, at 717,090 to 718,175
_0660
Psest_0661: Psest_0661 - PAS domain S-box, at 718,437 to 720,476
_0661
Position (kb) 717
718
719 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 716.287 kb on + strand at 716.287 kb on + strand at 716.288 kb on - strand at 716.288 kb on - strand at 716.630 kb on + strand, within Psest_0658 at 716.630 kb on + strand, within Psest_0658 at 716.630 kb on + strand, within Psest_0658 at 716.630 kb on + strand, within Psest_0658 at 716.630 kb on + strand, within Psest_0658 at 716.630 kb on + strand, within Psest_0658 at 716.630 kb on + strand, within Psest_0658 at 716.630 kb on + strand, within Psest_0658 at 716.630 kb on + strand, within Psest_0658 at 716.630 kb on + strand, within Psest_0658 at 716.630 kb on + strand, within Psest_0658 at 716.630 kb on + strand, within Psest_0658 at 716.630 kb on + strand, within Psest_0658 at 716.630 kb on + strand, within Psest_0658 at 716.631 kb on - strand, within Psest_0658 at 716.631 kb on - strand, within Psest_0658 at 716.631 kb on - strand, within Psest_0658 at 716.631 kb on - strand, within Psest_0658 at 716.631 kb on - strand, within Psest_0658 at 716.631 kb on - strand, within Psest_0658 at 716.631 kb on - strand, within Psest_0658 at 716.631 kb on - strand, within Psest_0658 at 716.631 kb on - strand, within Psest_0658 at 716.631 kb on - strand, within Psest_0658 at 716.631 kb on - strand, within Psest_0658 at 716.631 kb on - strand, within Psest_0658 at 717.171 kb on + strand at 717.171 kb on + strand at 717.171 kb on + strand at 717.427 kb on + strand, within Psest_0660 at 717.630 kb on - strand, within Psest_0660 at 717.630 kb on - strand, within Psest_0660 at 717.756 kb on - strand, within Psest_0660 at 718.250 kb on - strand at 718.359 kb on + strand at 718.359 kb on + strand at 718.359 kb on + strand at 718.360 kb on - strand at 718.360 kb on - strand at 718.474 kb on - strand at 718.525 kb on - strand at 718.599 kb on + strand at 718.599 kb on + strand at 718.599 kb on + strand at 718.599 kb on + strand at 718.600 kb on - strand at 718.600 kb on - strand at 718.600 kb on - strand at 718.600 kb on - strand at 718.601 kb on + strand at 718.601 kb on + strand at 718.601 kb on + strand at 718.601 kb on + strand at 718.601 kb on + strand at 718.601 kb on + strand at 718.601 kb on + strand at 718.601 kb on + strand at 718.601 kb on + strand at 718.601 kb on + strand at 718.601 kb on + strand at 718.601 kb on + strand at 718.601 kb on + strand at 718.602 kb on - strand at 718.602 kb on - strand at 718.602 kb on - strand at 718.602 kb on - strand at 718.602 kb on - strand at 718.602 kb on - strand at 718.602 kb on - strand at 718.602 kb on - strand at 718.602 kb on - strand at 718.602 kb on - strand at 718.602 kb on - strand at 718.863 kb on + strand, within Psest_0661 at 718.864 kb on - strand, within Psest_0661 at 719.108 kb on - strand, within Psest_0661
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 716,287 + +1.3 716,287 + +0.9 716,288 - +2.6 716,288 - +0.1 716,630 + Psest_0658 0.79 -0.4 716,630 + Psest_0658 0.79 +1.8 716,630 + Psest_0658 0.79 -2.4 716,630 + Psest_0658 0.79 +1.1 716,630 + Psest_0658 0.79 +1.6 716,630 + Psest_0658 0.79 -1.5 716,630 + Psest_0658 0.79 +0.9 716,630 + Psest_0658 0.79 -0.5 716,630 + Psest_0658 0.79 +1.2 716,630 + Psest_0658 0.79 -1.0 716,630 + Psest_0658 0.79 +0.8 716,630 + Psest_0658 0.79 +1.1 716,630 + Psest_0658 0.79 -0.2 716,630 + Psest_0658 0.79 -1.7 716,631 - Psest_0658 0.80 +0.2 716,631 - Psest_0658 0.80 +1.2 716,631 - Psest_0658 0.80 -0.4 716,631 - Psest_0658 0.80 +0.1 716,631 - Psest_0658 0.80 -1.5 716,631 - Psest_0658 0.80 -0.0 716,631 - Psest_0658 0.80 +0.3 716,631 - Psest_0658 0.80 -0.6 716,631 - Psest_0658 0.80 +0.1 716,631 - Psest_0658 0.80 -0.8 716,631 - Psest_0658 0.80 -0.3 716,631 - Psest_0658 0.80 -1.0 717,171 + +0.9 717,171 + +0.0 717,171 + -1.2 717,427 + Psest_0660 0.31 -0.0 717,630 - Psest_0660 0.50 -1.2 717,630 - Psest_0660 0.50 -0.6 717,756 - Psest_0660 0.61 -2.0 718,250 - +0.5 718,359 + -1.7 718,359 + +0.5 718,359 + +1.7 718,360 - -1.0 718,360 - +1.7 718,474 - +1.4 718,525 - +1.0 718,599 + +2.2 718,599 + +0.1 718,599 + +0.2 718,599 + -1.2 718,600 - -1.9 718,600 - -1.9 718,600 - -1.4 718,600 - +1.8 718,601 + -1.0 718,601 + -0.3 718,601 + -1.6 718,601 + +1.0 718,601 + +0.6 718,601 + -1.0 718,601 + -0.9 718,601 + -0.2 718,601 + +0.2 718,601 + -0.8 718,601 + +3.5 718,601 + +2.0 718,601 + +1.1 718,602 - +0.5 718,602 - +0.3 718,602 - -3.6 718,602 - +0.2 718,602 - +0.3 718,602 - -2.0 718,602 - -0.0 718,602 - -1.2 718,602 - +0.5 718,602 - +1.4 718,602 - +0.0 718,863 + Psest_0661 0.21 +2.7 718,864 - Psest_0661 0.21 -1.7 719,108 - Psest_0661 0.33 +0.6
Or see this region's nucleotide sequence