Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4346

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,544,636	+		Psest_4345	0.58	+0.2
4,544,636	+		Psest_4345	0.58	-0.8
4,544,636	+		Psest_4345	0.58	-0.6
4,544,637	-		Psest_4345	0.58	-0.7
4,544,637	-		Psest_4345	0.58	+0.8
4,544,637	-		Psest_4345	0.58	-2.4
4,544,919	-		Psest_4345	0.70	-0.6
4,545,284	+		Psest_4345	0.86	-0.7
4,545,284	+		Psest_4345	0.86	-1.1
4,545,284	+		Psest_4345	0.86	-1.8
4,545,284	+		Psest_4345	0.86	+0.9
4,545,284	+		Psest_4345	0.86	-0.2
4,545,284	+		Psest_4345	0.86	+0.9
4,545,284	+		Psest_4345	0.86	+0.5
4,545,285	-		Psest_4345	0.86	-1.3
4,545,285	-		Psest_4345	0.86	+1.7
4,545,285	-		Psest_4345	0.86	+2.0
4,545,285	-		Psest_4345	0.86	-0.7
4,545,285	-		Psest_4345	0.86	+1.5
4,545,285	-		Psest_4345	0.86	+2.1
4,545,353	+		Psest_4345	0.89	+1.2
4,545,353	+		Psest_4345	0.89	+0.4
4,545,353	+		Psest_4345	0.89	-0.5
4,545,354	-		Psest_4345	0.89	-1.5
4,545,354	-		Psest_4345	0.89	-1.2
4,545,354	-		Psest_4345	0.89	-0.5
4,545,390	-				+1.8
4,545,412	-				-1.5
4,545,471	+				+0.2
4,545,471	+				-0.5
4,545,471	+				-1.5
4,545,471	+				-0.9
4,545,472	-				-0.7
4,545,542	+				-0.4
4,545,542	+				-0.8
4,545,542	+				+1.9
4,545,543	-				-1.3
4,545,543	-				-0.5
4,545,543	-				-0.5
4,545,566	+				+0.3
4,545,566	+				-0.8
4,545,566	+				-1.6
4,545,566	+				-0.0
4,545,566	+				-1.9
4,545,566	+				+0.0
4,545,566	+				+0.4
4,545,566	+				+0.6
4,545,566	+				+0.3
4,545,566	+				+0.2
4,545,566	+				-0.1
4,545,566	+				-1.0
4,545,566	+				+1.5
4,545,566	+				+0.4
4,545,567	-				+1.2
4,545,567	-				-0.3
4,545,567	-				+1.0
4,545,567	-				+0.0
4,545,567	-				+0.2
4,545,567	-				+0.8
4,545,567	-				+0.7
4,545,567	-				-0.8
4,545,567	-				+0.1
4,545,567	-				-0.1
4,545,567	-				-0.7
4,545,567	-				-0.8
4,545,567	-				-0.8
4,545,568	+				-0.2
4,545,568	+				+1.3
4,545,568	+				-0.0
4,545,568	+				-0.7
4,545,568	+				-1.8
4,545,568	+				+1.0
4,545,568	+				-0.3
4,545,568	+				+1.2
4,545,568	+				-0.8
4,545,568	+				-0.1
4,545,568	+				-0.5
4,545,569	-				-0.7
4,545,569	-				-1.1
4,545,569	-				+0.6
4,545,569	-				-1.9
4,545,569	-				-0.3
4,545,569	-				-1.7
4,545,569	-				-0.2
4,545,569	-				-0.1
4,545,569	-				+1.0
4,545,569	-				+0.3
4,545,569	-				-0.9
4,545,569	-				-1.5
4,545,569	-				-0.6
4,545,569	-				-0.8
4,545,569	-				-0.3
4,545,725	-		Psest_4346	0.27	-0.8
4,545,725	-		Psest_4346	0.27	-0.2
4,545,725	-		Psest_4346	0.27	+0.0
4,545,725	-		Psest_4346	0.27	-0.1
4,545,913	+		Psest_4346	0.66	+0.9
4,545,914	-		Psest_4346	0.67	-3.3
4,545,914	-		Psest_4346	0.67	-1.4
4,545,934	+		Psest_4346	0.71	-0.3
4,545,934	+		Psest_4346	0.71	-1.3
4,545,934	+		Psest_4346	0.71	-0.5
4,545,934	+		Psest_4346	0.71	-0.3
4,545,934	+		Psest_4346	0.71	-0.7
4,545,935	-		Psest_4346	0.71	-0.2
4,546,004	+		Psest_4346	0.86	-0.7
4,546,004	+		Psest_4346	0.86	-1.9
4,546,004	+		Psest_4346	0.86	-0.9
4,546,005	-		Psest_4346	0.86	+0.4
4,546,047	-				-3.0
4,546,134	+				-0.9
4,546,134	+				+0.5
4,546,134	+				+1.8
4,546,134	+				-2.4
4,546,134	+				+0.7
4,546,134	+				-0.3
4,546,134	+				+0.8
4,546,135	-				+2.4
4,546,135	-				-2.4
4,546,135	-				-0.9
4,546,135	-				+1.5
4,546,138	+				-1.0
4,546,138	+				-0.1
4,546,138	+				+0.1
4,546,138	+				-1.3
4,546,138	+				+0.1
4,546,138	+				-1.3
4,546,138	+				+0.7
4,546,138	+				-0.2
4,546,138	+				-0.8
4,546,139	-				-0.9
4,546,139	-				+0.7
4,546,139	-				+3.7
4,546,139	-				-2.4
4,546,139	-				+0.6
4,546,139	-				-2.4
4,546,139	-				-1.1
4,546,139	-				-0.5
4,546,139	-				-0.5
4,546,139	-				+1.8
4,546,254	-				+0.4
4,546,454	+		Psest_4347	0.13	-0.5
4,546,454	+		Psest_4347	0.13	-1.3
4,546,454	+		Psest_4347	0.13	+0.1
4,546,454	+		Psest_4347	0.13	-0.7
4,546,454	+		Psest_4347	0.13	-0.6
4,546,454	+		Psest_4347	0.13	+0.3
4,546,454	+		Psest_4347	0.13	-1.7
4,546,455	-		Psest_4347	0.13	+0.3
4,546,455	-		Psest_4347	0.13	+0.2
4,546,455	-		Psest_4347	0.13	-0.8
4,546,455	-		Psest_4347	0.13	-2.7
4,546,455	-		Psest_4347	0.13	-0.9
4,546,455	-		Psest_4347	0.13	-1.1
4,546,616	+		Psest_4347	0.20	-0.3
4,546,668	+		Psest_4347	0.22	+0.1
4,546,668	+		Psest_4347	0.22	-1.5
4,546,668	+		Psest_4347	0.22	+2.9
4,546,669	-		Psest_4347	0.22	+0.3
4,546,669	-		Psest_4347	0.22	-0.0
4,546,669	-		Psest_4347	0.22	-0.0
4,546,669	-		Psest_4347	0.22	-0.4
4,546,679	-		Psest_4347	0.22	+2.1
4,546,795	+		Psest_4347	0.27	-1.4
4,546,796	-		Psest_4347	0.27	+0.9